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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.283763 (4 seq.)
>WENV180800413
ODJD01000008
[ODJD] human metagenome; G_DNA_Supragingival plaque
11734
11662
-
Lys
TTT
[ENA]
¡û
>WENV180805047
ODJG01044657
[ODJG] human metagenome; G_DNA_Supragingival plaque
665
737
+
Lys
TTT
[ENA]
¡û
>WENV180923740
ODTK01000112
[ODTK] human metagenome; G_DNA_Supragingival plaque
20238
20166
-
Lys
TTT
[ENA]
¡û
>WENV181137313
OEGJ01001726
[OEGJ] human metagenome; G_DNA_Supragingival plaque
7576
7504
-
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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