This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.284907 (62 seq.)
>W1711095159
LTGO01000014
Actinomycetota
Corynebacterium sp. HMSC067D03 [LTGO]
42199
42124
-
Val
TAC
[ENA]
¡û
>W1711096605
LTHX01000041
Actinomycetota
Corynebacterium sp. HMSC055D05 [LTHX]
41871
41796
-
Val
TAC
[ENA]
¡û
>W1711102650
LTNW01000095
Actinomycetota
Corynebacterium sp. HMSC034A01 [LTNW]
20884
20809
-
Val
TAC
[ENA]
¡û
>W1711103648
LTOW01000075
Actinomycetota
Corynebacterium sp. HMSC070H05 [LTOW]
29190
29265
+
Val
TAC
[ENA]
¡û
>W1711105921
LTRH01000032
Actinomycetota
Corynebacterium sp. HMSC036E10 [LTRH]
43123
43048
-
Val
TAC
[ENA]
¡û
>W131159152
AQUV01000001
Actinomycetota
Corynebacterium capitovis DSM 44611 [AQUV]
201148
201223
+
Val
TAC
[ENA]
¡û
>W1711106554
LTRY01000034
Actinomycetota
Corynebacterium sp. HMSC034E11 [LTRY]
8160
8085
-
Val
TAC
[ENA]
¡û
>W1711106694
LTSB01000136
Actinomycetota
Corynebacterium sp. HMSC034B08 [LTSB]
30301
30376
+
Val
TAC
[ENA]
¡û
>W1711107213
LTSO01000056
Actinomycetota
Corynebacterium sp. HMSC075D04 [LTSO]
8171
8096
-
Val
TAC
[ENA]
¡û
>W1711108842
LTUC01000075
Actinomycetota
Corynebacterium sp. HMSC071B10 [LTUC]
1677
1602
-
Val
TAC
[ENA]
¡û
>W1711114754
LTZO01000062
Actinomycetota
Corynebacterium sp. HMSC11D10 [LTZO]
2077
2002
-
Val
TAC
[ENA]
¡û
>W1711185884
LWNT01000067
Actinomycetota
Corynebacterium sp. HMSC08F01 [LWNT]
111058
110983
-
Val
TAC
[ENA]
¡û
>W1711185914
LWNU01000010
Actinomycetota
Corynebacterium sp. HMSC08D02 [LWNU]
42598
42523
-
Val
TAC
[ENA]
¡û
>W1711186518
LWOH01000021
Actinomycetota
Corynebacterium sp. HMSC05H05 [LWOH]
63698
63773
+
Val
TAC
[ENA]
¡û
>W1711186771
LWOM01000045
Actinomycetota
Corynebacterium sp. HMSC05C01 [LWOM]
9137
9212
+
Val
TAC
[ENA]
¡û
>W1711186934
LWOP01000078
Actinomycetota
Corynebacterium sp. HMSC30G07 [LWOP]
199
124
-
Val
TAC
[ENA]
¡û
>W1711186973
LWOR01000053
Actinomycetota
Corynebacterium sp. HMSC29G08 [LWOR]
311
236
-
Val
TAC
[ENA]
¡û
>W1711208412
LXGG01000019
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
207174
207099
-
Val
TAC
[ENA]
¡û
>W1711482563
MKAX01000724
Actinomycetota
Corynebacterium sp. BCW_4722 concisus [MKAX]
39654
39579
-
Val
TAC
[ENA]
¡û
>W1711510244
MLAL01000015
Actinomycetota
Corynebacterium sp. NML130628 [MLAL]
52950
53025
+
Val
TAC
[ENA]
¡û
>W1711511684
MLCQ01000011
Actinomycetota
Corynebacterium sp. NML140438 [MLCQ]
550
475
-
Val
TAC
[ENA]
¡û
>W1711511755
MLCR01000015
Actinomycetota
Corynebacterium sp. NML120713 [MLCR]
287
212
-
Val
TAC
[ENA]
¡û
>W1711517396
MLJM01000066
Actinomycetota
Corynebacterium sp. HMSC074A01 [MLJM]
26440
26365
-
Val
TAC
[ENA]
¡û
>C171064718
CP017639
Actinomycetota
Corynebacterium sp. NML98-0116 [CP017639]
729368
729443
+
Val
TAC
-
¡û
>W131169226
AREP01000001
Actinomycetota
Corynebacterium pilosum DSM 20521 [AREP]
239907
239832
-
Val
TAC
[ENA]
¡û
>W131251652
CAVS020000023
Actinomycetota
Corynebacterium ihumii GD7 [CAVS]
3928
3853
-
Val
TAC
[ENA]
¡û
>W141243537
CAJP01000003
Actinomycetota
Corynebacterium timonense 5401744 [CAJP]
93469
93394
-
Val
TAC
[ENA]
¡û
>WENV182629121
OJKR01006659
[OJKR] metagenome; surface
358
431
+
Val
TAC
[ENA]
¢þ
>WENV182636071
OJKZ01000201
[OJKZ] metagenome; surface
1720
1793
+
Val
TAC
[ENA]
¢þ
>WENV182641832
OJLK01002303
[OJLK] metagenome; surface
491
416
-
Val
TAC
[ENA]
¢þ
>WENV182642229
OJLL01007201
[OJLL] metagenome; surface
118
193
+
Val
TAC
[ENA]
¢þ
>WENV182643144
OJLS01001893
[OJLS] metagenome; surface
260
185
-
Val
TAC
[ENA]
¢þ
>WENV182643643
OJLW01000334
[OJLW] metagenome; surface
21502
21577
+
Val
TAC
[ENA]
¢þ
>WENV182643742
OJLW01000841
[OJLW] metagenome; surface
10881
10808
-
Val
TAC
[ENA]
¢þ
>WENV182644828
OJLY01000516
[OJLY] metagenome; surface
21494
21569
+
Val
TAC
[ENA]
¢þ
>WENV182644993
OJLY01001316
[OJLY] metagenome; surface
5928
6001
+
Val
TAC
[ENA]
¢þ
>WENV182645798
OJLZ01003156
[OJLZ] metagenome; surface
937
862
-
Val
TAC
[ENA]
¢þ
>WENV182671858
OJNM01005563
[OJNM] metagenome; surface
1615
1540
-
Val
TAC
[ENA]
¢þ
>W09127940
ACLJ01000007
Actinomycetota
Corynebacterium genitalium ATCC 33030 [ACLJ]
15052
14977
-
Val
TAC
[ENA]
¡û
>C181039050
CP019688
Actinomycetota
Corynebacterium glaucum DSM 30827 [CP019688]
1823524
1823449
-
Val
TAC
-
¡û
>C181225942
LT906467
Actinomycetota
Corynebacterium imitans NCTC13015 [LT906467]
1891102
1891029
-
Val
TAC
-
¡û
>C181226218
LT906473
Actinomycetota
Corynebacterium cystitidis NCTC11863 [LT906473]
647657
647732
+
Val
TAC
-
¡û
>W1910225826
FMSX01000003
Actinomycetota
Corynebacterium sp. MC3 [FMSX]
1302
1227
-
Val
TAC
[ENA]
¡û
>W1910339938
FTLL01000028
Actinomycetota
Corynebacterium urinipleomorphum Marseille-P2799 [FTLL]
16959
16884
-
Val
TAC
[ENA]
¡û
>W1910469850
FWYQ01000044
Actinomycetota
Corynebacterium fournieri Marseille-P2948 [FWYQ]
68004
68079
+
Val
TAC
[ENA]
¡û
>W1911551232
OVSI01000010
Actinomycetota
Corynebacterium senegalense Marseille-P4329 [OVSI]
154340
154415
+
Val
TAC
[ENA]
¡û
>W1911596571
PNHG01000024
Actinomycetota
Corynebacterium tuscaniense UMB0792 [PNHG]
10771
10846
+
Val
TAC
[ENA]
¡û
>W1810187357
PKHN01000004
Actinomycetota
Corynebacterium riegelii UMB0243 [PKHN]
263090
263165
+
Val
TAC
[ENA]
¡û
>W1810187475
PKHP01000014
Actinomycetota
Corynebacterium coyleae UMB0989 [PKHP]
33351
33426
+
Val
TAC
[ENA]
¡û
>W1810187502
PKHQ01000004
Actinomycetota
Corynebacterium coyleae UMB0147 [PKHQ]
188264
188189
-
Val
TAC
[ENA]
¡û
>C151007288
CP005286
Actinomycetota
Corynebacterium humireducens NBRC 106098 = DSM 45392 [CP005286]
1906269
1906194
-
Val
TAC
[Ensembl]
¡û
>C151045525
CP009211
Actinomycetota
Corynebacterium imitans DSM 44264 [CP009211]
1808823
1808748
-
Val
TAC
[Ensembl]
¡û
>W1511351466
JRNG01000050
Actinomycetota
Corynebacterium tuscaniense DNF00037 [JRNG]
10236
10161
-
Val
TAC
[ENA]
¡û
>W1511644818
LDYD01000006
Actinomycetota
Corynebacterium pilosum CIP103422 [LDYD]
455094
455019
-
Val
TAC
[ENA]
¡û
>C161041075
CP012342
Actinomycetota
Corynebacterium riegelii PUDD_83A45 [CP012342]
228572
228497
-
Val
TAC
[Ensembl]
¡û
>W1610069817
BCSU01000009
Actinomycetota
Corynebacterium humireducens NBRC 106098 = DSM 45392 [BCSU]
97047
97122
+
Val
TAC
[ENA]
¡û
>W1610996174
LXGG01000019
Actinomycetota
Corynebacterium afermentans subsp. afermentans [LXGG]
207174
207099
-
Val
TAC
[ENA]
¡û
>W1710067190
BCSU01000009
Actinomycetota
Corynebacterium humireducens NBRC 106098 = DSM 45392 [BCSU]
97047
97122
+
Val
TAC
[ENA]
¡û
>W1710534362
FNRU01000002
Actinomycetota
Corynebacterium coyleae [FNRU]
309259
309184
-
Val
TAC
[ENA]
¡û
>W1710552162
FOGQ01000013
Actinomycetota
Corynebacterium cystitidis DSM 20524 [FOGQ]
43962
44037
+
Val
TAC
[ENA]
¡û
>W1710596009
FTMH01000026
Actinomycetota
Corynebacterium afermentans [FTMH]
26840
26765
-
Val
TAC
[ENA]
¡û
>W1710598780
FTOF01000003
Actinomycetota
Corynebacterium appendicis CIP 107643 [FTOF]
1694
1619
-
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK