Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
| Identical group No.28530 (91 seq.) |
|
>W1710926957 |
LOEV01000072 |
Alphaproteobacteria |
Alphaproteobacteria bacterium BRH_c36 [LOEV] |
18408 |
18497 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W1711795365 |
MWPQ01000031 |
Alphaproteobacteria |
Nitrobacter vulgaris [MWPQ] |
98576 |
98665 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W1711795366 |
MWPQ01000036 |
Alphaproteobacteria |
Nitrobacter vulgaris [MWPQ] |
10 |
99 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W131166841 |
ARCT01000004 |
Alphaproteobacteria |
Methylocystis rosea SV97 [ARCT] |
353952 |
354041 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>C014926 |
CP000319 |
Alphaproteobacteria |
Nitrobacter hamburgensis X14 [CP000319] |
2240909 |
2240998 |
+ |
Ser |
TGA |
[Ensembl] |
¡û |
|
>C018871 |
CP000463 |
Alphaproteobacteria |
Rhodopseudomonas palustris [CP000463] |
3000019 |
2999930 |
- |
Ser |
TGA |
[Ensembl] |
¡û |
|
>C018964 |
CP000283 |
Alphaproteobacteria |
Rhodopseudomonas palustris BisB5 [CP000283] |
2681606 |
2681517 |
- |
Ser |
TGA |
[Ensembl] |
¡û |
|
>w022264 |
AAWJ01000001 |
Alphaproteobacteria |
Parvibaculum lavamentivorans DS-1 [AAWJ] |
3542616 |
3542525 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>w012993 |
AAMY01000010 |
Alphaproteobacteria |
Nitrobacter sp. Nb-311A [AAMY] |
113993 |
114084 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV180032384 |
FTJZ01037227 |
[FTJZ] metagenome; soil |
|
75 |
164 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV180283233 |
OBIC01204619 |
[OBIC] beach sand metagenome; beach sand |
|
126 |
37 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV180293978 |
OBIY01007327 |
[OBIY] beach sand metagenome; beach sand |
|
1053 |
1142 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV180294252 |
OBIY01051627 |
[OBIY] beach sand metagenome; beach sand |
|
61 |
150 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV180309660 |
OBJS01015444 |
[OBJS] beach sand metagenome; beach sand |
|
46 |
135 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV180396456 |
OBPV01005391 |
[OBPV] marine metagenome; ENVO:00002010 |
|
427 |
338 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV180635980 |
OCRE01034440 |
[OCRE] marine metagenome; Seawater |
|
244 |
155 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W141063705 |
APJE01000009 |
Alphaproteobacteria |
Afipia sp. OHSU_I-C6 [APJE] |
336604 |
336693 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W141063738 |
APJF01000001 |
Alphaproteobacteria |
Afipia sp. OHSU_I-C4 [APJF] |
336604 |
336693 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W141063842 |
APJH01000006 |
Alphaproteobacteria |
Afipia sp. OHSU_II-C2 [APJH] |
100227 |
100138 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W141063881 |
APJI01000004 |
Alphaproteobacteria |
Afipia sp. OHSU_II-C1 [APJI] |
264506 |
264417 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W141093680 |
AVBM01000003 |
Alphaproteobacteria |
Afipia sp. NBIMC_P1-C3 [AVBM] |
262007 |
261918 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV181162499 |
OEIO01000050 |
[OEIO] marine metagenome; sea ice |
|
6385 |
6474 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV181321536 |
OFKM01008997 |
[OFKM] marine metagenome; sea ice |
|
625 |
714 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV181322067 |
OFKP01003012 |
[OFKP] marine metagenome; sea ice |
|
184 |
273 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV181322612 |
OFKT01005209 |
[OFKT] marine metagenome; sea ice |
|
93 |
4 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W08007842 |
ABKN01000001 |
Alphaproteobacteria |
Afipia carboxidovorans OM5 [ABKN] |
2078900 |
2078989 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W141188901 |
AYNA01000076 |
Alphaproteobacteria |
Methylocystis sp. SB2 [AYNA] |
112487 |
112398 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>C08007350 |
CP000774 |
Alphaproteobacteria |
Parvibaculum lavamentivorans DS-1 [CP000774] |
3315731 |
3315820 |
+ |
Ser |
TGA |
[Ensembl] |
¡û |
|
>W141244521 |
CAKO01000008 |
Alphaproteobacteria |
Reyranella massiliensis 521 [CAKO] |
156804 |
156715 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183614815 |
OOEA01001876 |
[OOEA] marine metagenome; sea ice |
|
1275 |
1186 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183615367 |
OOEB01008310 |
[OOEB] marine metagenome; sea ice |
|
276 |
365 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183623563 |
OOGA01010500 |
[OOGA] marine metagenome; sea ice |
|
383 |
294 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183630622 |
OOGU01000015 |
[OOGU] marine metagenome; sea ice |
|
51974 |
52063 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183665734 |
ORJL010487617 |
[ORJL] groundwater metagenome; groundwater |
|
928 |
1017 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183667387 |
ORJL010643531 |
[ORJL] groundwater metagenome; groundwater |
|
828 |
739 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183675933 |
ORJL011569179 |
[ORJL] groundwater metagenome; groundwater |
|
116 |
205 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183677328 |
ORJL011742404 |
[ORJL] groundwater metagenome; groundwater |
|
52 |
141 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183745146 |
PJUL01003237 |
[PJUL] feces metagenome; Chicken feces enriched on filter paper |
|
503 |
592 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV183748164 |
PPFU01016457 |
[PPFU] hypolithon metagenome; Antarctic Hypolithon |
|
623 |
712 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170010644 |
APMI01023637 |
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater |
|
110 |
199 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170317967 |
CESQ01004072 |
[CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
328 |
239 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170403950 |
CEUF01137238 |
[CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
187 |
98 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170405851 |
CEUG01210554 |
[CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
351 |
440 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170413828 |
CEUK01149276 |
[CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
376 |
287 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170469756 |
CEVF01139765 |
[CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
56457 |
56546 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170486686 |
CEVN01349594 |
[CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
1221 |
1132 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170529070 |
CEWJ01099751 |
[CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
1308 |
1397 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170566289 |
FKKE01013802 |
[FKKE] freshwater metagenome; freshwater |
|
1093 |
1004 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170648694 |
JRHI01001477 |
[JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced |
|
6557 |
6468 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170723135 |
LSQX01256412 |
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition |
|
3415 |
3326 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170809163 |
MDSW01127396 |
[MDSW] marine metagenome; seawater |
|
119803 |
119714 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170884084 |
MDTC01177734 |
[MDTC] marine metagenome; seawater |
|
27602 |
27691 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170892770 |
MDTD01042501 |
[MDTD] marine metagenome; seawater |
|
119803 |
119714 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170928603 |
MDTG01136388 |
[MDTG] marine metagenome; seawater |
|
119820 |
119731 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170962233 |
MRWF01009891 |
[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell |
|
26158 |
26069 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170963065 |
MRWG01000007 |
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell |
|
234036 |
234125 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>WENV170991102 |
MWWA01110153 |
[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil |
|
322 |
233 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W09103003 |
AAIS01000002 |
Alphaproteobacteria |
Nitrobacter hamburgensis X14 [AAIS] |
600017 |
599928 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W09103848 |
AAKZ01000018 |
Alphaproteobacteria |
Rhodopseudomonas palustris BisB5 [AAKZ] |
13624 |
13535 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W09103883 |
AALA01000016 |
Alphaproteobacteria |
Rhodopseudomonas palustris BisA53 [AALA] |
16354 |
16443 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>C191118896 |
CP034086 |
Alphaproteobacteria |
Methylocystis rosea GW6 [CP034086] |
2429766 |
2429855 |
+ |
Ser |
TGA |
- |
¡û |
|
>C191171950 |
CP039740 |
Alphaproteobacteria |
Pseudolabrys sp. FHR47 [CP039740] |
2456418 |
2456507 |
+ |
Ser |
TGA |
- |
¡û |
|
>C191220324 |
LR536450 |
Alphaproteobacteria |
Methylocella tundrae [LR536450] |
1348844 |
1348933 |
+ |
Ser |
TGA |
- |
¡û |
|
>W1910182860 |
BJNF01000073 |
Alphaproteobacteria |
Nitrobacter winogradskyi NBRC 14297 [BJNF] |
65591 |
65680 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W1910698343 |
MEMM01000166 |
Alphaproteobacteria |
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 [MEMM] |
12024 |
12113 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>C09108141 |
CP001196 |
Alphaproteobacteria |
Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196] |
2078586 |
2078675 |
+ |
Ser |
TGA |
- |
¡û |
|
>W1911148508 |
NPEX01000088 |
Alphaproteobacteria |
Rhodoplanes roseus DSM 5909 [NPEX] |
13471 |
13560 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W1911760552 |
QWVU01000007 |
Alphaproteobacteria |
Rhodopseudomonas palustris R1 [QWVU] |
7536 |
7625 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W2010096475 |
BJNF01000073 |
Alphaproteobacteria |
Nitrobacter winogradskyi NBRC 14297 [BJNF] |
65591 |
65680 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W2010106349 |
BKAJ01000012 |
Alphaproteobacteria |
Reyranella soli NBRC 108950 [BKAJ] |
50799 |
50710 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W2010639471 |
JABVWW010000002 |
Alphaproteobacteria |
Methylocystis sp. FS [JABVWW] |
109167 |
109078 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W2010703734 |
JACHIJ010000002 |
Alphaproteobacteria |
Afipia massiliensis DSM 17498 [JACHIJ] |
10821 |
10732 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W2010831768 |
MEMM01000166 |
Alphaproteobacteria |
Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 [MEMM] |
12024 |
12113 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W2011021439 |
NPEX01000088 |
Alphaproteobacteria |
Rhodoplanes roseus DSM 5909 [NPEX] |
13471 |
13560 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W2011323644 |
QWVU01000007 |
Alphaproteobacteria |
Rhodopseudomonas palustris R1 [QWVU] |
7536 |
7625 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W2110080282 |
CAIJZS010000526 |
Alphaproteobacteria |
Enhydrobacter aerosaccus [CAIJZS] |
5701 |
5790 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W2110082121 |
CAIMEE010000397 |
Alphaproteobacteria |
Enhydrobacter aerosaccus [CAIMEE] |
9352 |
9263 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W2110082725 |
CAIMXB010000492 |
Alphaproteobacteria |
Enhydrobacter aerosaccus [CAIMXB] |
26457 |
26368 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W2110088120 |
CAIUPB010000106 |
Alphaproteobacteria |
Enhydrobacter aerosaccus [CAIUPB] |
1287 |
1376 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W2110089143 |
CAIWTJ010000124 |
Alphaproteobacteria |
Enhydrobacter aerosaccus [CAIWTJ] |
11971 |
11882 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W2110474562 |
JAFCLN010000002 |
Alphaproteobacteria |
Bradyrhizobium lablabi SZCCT0009 [JAFCLN] |
464780 |
464691 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>C231294201 |
CP091318 |
Alphaproteobacteria |
Methylocystis sp. SB2 [CP091318] |
2717854 |
2717765 |
- |
Ser |
TGA |
- |
¡û |
|
>C241174678 |
CP058907 |
Alphaproteobacteria |
Rhodopseudomonas palustris CGMCC 1.2180 [CP058907] |
2532090 |
2532001 |
- |
Ser |
TGA |
- |
¡û |
|
>C241269752 |
CP126533 |
Alphaproteobacteria |
Afipia sp. [CP126533] |
1774940 |
1774851 |
- |
Ser |
TGA |
- |
¡û |
|
>C11116291 |
CP002821 |
Alphaproteobacteria |
Afipia carboxidovorans OM4 [CP002821] |
2047059 |
2046970 |
- |
Ser |
TGA |
[Ensembl] |
¡û |
|
>C121003011 |
CP002826 |
Alphaproteobacteria |
Afipia carboxidovorans OM5 [CP002826] |
2045933 |
2045844 |
- |
Ser |
TGA |
- |
¡û |
|
>W1610784499 |
LOEV01000072 |
Alphaproteobacteria |
Alphaproteobacteria bacterium BRH_c36 [LOEV] |
18408 |
18497 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W1610912700 |
LSIM01000235 |
Alphaproteobacteria |
Bradyrhizobium sp. CCH4-A6 [LSIM] |
10606 |
10517 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W1610949878 |
LVEM01000001 |
Alphaproteobacteria |
Bradyrhizobium stylosanthis [LVEM] |
1358679 |
1358590 |
- |
Ser |
TGA |
[ENA] |
¡û |
|
>W1710515704 |
FNBZ01000006 |
Alphaproteobacteria |
Bosea robiniae [FNBZ] |
288439 |
288528 |
+ |
Ser |
TGA |
[ENA] |
¡û |
|
>W1710548428 |
FODT01000010 |
Alphaproteobacteria |
Rhodopseudomonas pseudopalustris [FODT] |
8985 |
8896 |
- |
Ser |
TGA |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |