tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.28530 (91 seq.)
>W1710926957 LOEV01000072 Alphaproteobacteria Alphaproteobacteria bacterium BRH_c36 [LOEV] 18408 18497 + Ser TGA [ENA] ¡û
>W1711795365 MWPQ01000031 Alphaproteobacteria Nitrobacter vulgaris [MWPQ] 98576 98665 + Ser TGA [ENA] ¡û
>W1711795366 MWPQ01000036 Alphaproteobacteria Nitrobacter vulgaris [MWPQ] 10 99 + Ser TGA [ENA] ¡û
>W131166841 ARCT01000004 Alphaproteobacteria Methylocystis rosea SV97 [ARCT] 353952 354041 + Ser TGA [ENA] ¡û
>C014926 CP000319 Alphaproteobacteria Nitrobacter hamburgensis X14 [CP000319] 2240909 2240998 + Ser TGA [Ensembl] ¡û
>C018871 CP000463 Alphaproteobacteria Rhodopseudomonas palustris [CP000463] 3000019 2999930 - Ser TGA [Ensembl] ¡û
>C018964 CP000283 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [CP000283] 2681606 2681517 - Ser TGA [Ensembl] ¡û
>w022264 AAWJ01000001 Alphaproteobacteria Parvibaculum lavamentivorans DS-1 [AAWJ] 3542616 3542525 - Ser TGA [ENA] ¡û
>w012993 AAMY01000010 Alphaproteobacteria Nitrobacter sp. Nb-311A [AAMY] 113993 114084 + Ser TGA [ENA] ¡û
>WENV180032384 FTJZ01037227 [FTJZ] metagenome; soil 75 164 + Ser TGA [ENA] ¡û
>WENV180283233 OBIC01204619 [OBIC] beach sand metagenome; beach sand 126 37 - Ser TGA [ENA] ¡û
>WENV180293978 OBIY01007327 [OBIY] beach sand metagenome; beach sand 1053 1142 + Ser TGA [ENA] ¡û
>WENV180294252 OBIY01051627 [OBIY] beach sand metagenome; beach sand 61 150 + Ser TGA [ENA] ¡û
>WENV180309660 OBJS01015444 [OBJS] beach sand metagenome; beach sand 46 135 + Ser TGA [ENA] ¡û
>WENV180396456 OBPV01005391 [OBPV] marine metagenome; ENVO:00002010 427 338 - Ser TGA [ENA] ¡û
>WENV180635980 OCRE01034440 [OCRE] marine metagenome; Seawater 244 155 - Ser TGA [ENA] ¡û
>W141063705 APJE01000009 Alphaproteobacteria Afipia sp. OHSU_I-C6 [APJE] 336604 336693 + Ser TGA [ENA] ¡û
>W141063738 APJF01000001 Alphaproteobacteria Afipia sp. OHSU_I-C4 [APJF] 336604 336693 + Ser TGA [ENA] ¡û
>W141063842 APJH01000006 Alphaproteobacteria Afipia sp. OHSU_II-C2 [APJH] 100227 100138 - Ser TGA [ENA] ¡û
>W141063881 APJI01000004 Alphaproteobacteria Afipia sp. OHSU_II-C1 [APJI] 264506 264417 - Ser TGA [ENA] ¡û
>W141093680 AVBM01000003 Alphaproteobacteria Afipia sp. NBIMC_P1-C3 [AVBM] 262007 261918 - Ser TGA [ENA] ¡û
>WENV181162499 OEIO01000050 [OEIO] marine metagenome; sea ice 6385 6474 + Ser TGA [ENA] ¡û
>WENV181321536 OFKM01008997 [OFKM] marine metagenome; sea ice 625 714 + Ser TGA [ENA] ¡û
>WENV181322067 OFKP01003012 [OFKP] marine metagenome; sea ice 184 273 + Ser TGA [ENA] ¡û
>WENV181322612 OFKT01005209 [OFKT] marine metagenome; sea ice 93 4 - Ser TGA [ENA] ¡û
>W08007842 ABKN01000001 Alphaproteobacteria Afipia carboxidovorans OM5 [ABKN] 2078900 2078989 + Ser TGA [ENA] ¡û
>W141188901 AYNA01000076 Alphaproteobacteria Methylocystis sp. SB2 [AYNA] 112487 112398 - Ser TGA [ENA] ¡û
>C08007350 CP000774 Alphaproteobacteria Parvibaculum lavamentivorans DS-1 [CP000774] 3315731 3315820 + Ser TGA [Ensembl] ¡û
>W141244521 CAKO01000008 Alphaproteobacteria Reyranella massiliensis 521 [CAKO] 156804 156715 - Ser TGA [ENA] ¡û
>WENV183614815 OOEA01001876 [OOEA] marine metagenome; sea ice 1275 1186 - Ser TGA [ENA] ¡û
>WENV183615367 OOEB01008310 [OOEB] marine metagenome; sea ice 276 365 + Ser TGA [ENA] ¡û
>WENV183623563 OOGA01010500 [OOGA] marine metagenome; sea ice 383 294 - Ser TGA [ENA] ¡û
>WENV183630622 OOGU01000015 [OOGU] marine metagenome; sea ice 51974 52063 + Ser TGA [ENA] ¡û
>WENV183665734 ORJL010487617 [ORJL] groundwater metagenome; groundwater 928 1017 + Ser TGA [ENA] ¡û
>WENV183667387 ORJL010643531 [ORJL] groundwater metagenome; groundwater 828 739 - Ser TGA [ENA] ¡û
>WENV183675933 ORJL011569179 [ORJL] groundwater metagenome; groundwater 116 205 + Ser TGA [ENA] ¡û
>WENV183677328 ORJL011742404 [ORJL] groundwater metagenome; groundwater 52 141 + Ser TGA [ENA] ¡û
>WENV183745146 PJUL01003237 [PJUL] feces metagenome; Chicken feces enriched on filter paper 503 592 + Ser TGA [ENA] ¡û
>WENV183748164 PPFU01016457 [PPFU] hypolithon metagenome; Antarctic Hypolithon 623 712 + Ser TGA [ENA] ¡û
>WENV170010644 APMI01023637 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 110 199 + Ser TGA [ENA] ¡û
>WENV170317967 CESQ01004072 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 328 239 - Ser TGA [ENA] ¡û
>WENV170403950 CEUF01137238 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 187 98 - Ser TGA [ENA] ¡û
>WENV170405851 CEUG01210554 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 351 440 + Ser TGA [ENA] ¡û
>WENV170413828 CEUK01149276 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 376 287 - Ser TGA [ENA] ¡û
>WENV170469756 CEVF01139765 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 56457 56546 + Ser TGA [ENA] ¡û
>WENV170486686 CEVN01349594 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1221 1132 - Ser TGA [ENA] ¡û
>WENV170529070 CEWJ01099751 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1308 1397 + Ser TGA [ENA] ¡û
>WENV170566289 FKKE01013802 [FKKE] freshwater metagenome; freshwater 1093 1004 - Ser TGA [ENA] ¡û
>WENV170648694 JRHI01001477 [JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced 6557 6468 - Ser TGA [ENA] ¡û
>WENV170723135 LSQX01256412 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3415 3326 - Ser TGA [ENA] ¡û
>WENV170809163 MDSW01127396 [MDSW] marine metagenome; seawater 119803 119714 - Ser TGA [ENA] ¡û
>WENV170884084 MDTC01177734 [MDTC] marine metagenome; seawater 27602 27691 + Ser TGA [ENA] ¡û
>WENV170892770 MDTD01042501 [MDTD] marine metagenome; seawater 119803 119714 - Ser TGA [ENA] ¡û
>WENV170928603 MDTG01136388 [MDTG] marine metagenome; seawater 119820 119731 - Ser TGA [ENA] ¡û
>WENV170962233 MRWF01009891 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 26158 26069 - Ser TGA [ENA] ¡û
>WENV170963065 MRWG01000007 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 234036 234125 + Ser TGA [ENA] ¡û
>WENV170991102 MWWA01110153 [MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil 322 233 - Ser TGA [ENA] ¡û
>W09103003 AAIS01000002 Alphaproteobacteria Nitrobacter hamburgensis X14 [AAIS] 600017 599928 - Ser TGA [ENA] ¡û
>W09103848 AAKZ01000018 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [AAKZ] 13624 13535 - Ser TGA [ENA] ¡û
>W09103883 AALA01000016 Alphaproteobacteria Rhodopseudomonas palustris BisA53 [AALA] 16354 16443 + Ser TGA [ENA] ¡û
>C191118896 CP034086 Alphaproteobacteria Methylocystis rosea GW6 [CP034086] 2429766 2429855 + Ser TGA - ¡û
>C191171950 CP039740 Alphaproteobacteria Pseudolabrys sp. FHR47 [CP039740] 2456418 2456507 + Ser TGA - ¡û
>C191220324 LR536450 Alphaproteobacteria Methylocella tundrae [LR536450] 1348844 1348933 + Ser TGA - ¡û
>W1910182860 BJNF01000073 Alphaproteobacteria Nitrobacter winogradskyi NBRC 14297 [BJNF] 65591 65680 + Ser TGA [ENA] ¡û
>W1910698343 MEMM01000166 Alphaproteobacteria Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 [MEMM] 12024 12113 + Ser TGA [ENA] ¡û
>C09108141 CP001196 Alphaproteobacteria Afipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196] 2078586 2078675 + Ser TGA - ¡û
>W1911148508 NPEX01000088 Alphaproteobacteria Rhodoplanes roseus DSM 5909 [NPEX] 13471 13560 + Ser TGA [ENA] ¡û
>W1911760552 QWVU01000007 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 7536 7625 + Ser TGA [ENA] ¡û
>W2010096475 BJNF01000073 Alphaproteobacteria Nitrobacter winogradskyi NBRC 14297 [BJNF] 65591 65680 + Ser TGA [ENA] ¡û
>W2010106349 BKAJ01000012 Alphaproteobacteria Reyranella soli NBRC 108950 [BKAJ] 50799 50710 - Ser TGA [ENA] ¡û
>W2010639471 JABVWW010000002 Alphaproteobacteria Methylocystis sp. FS [JABVWW] 109167 109078 - Ser TGA [ENA] ¡û
>W2010703734 JACHIJ010000002 Alphaproteobacteria Afipia massiliensis DSM 17498 [JACHIJ] 10821 10732 - Ser TGA [ENA] ¡û
>W2010831768 MEMM01000166 Alphaproteobacteria Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 [MEMM] 12024 12113 + Ser TGA [ENA] ¡û
>W2011021439 NPEX01000088 Alphaproteobacteria Rhodoplanes roseus DSM 5909 [NPEX] 13471 13560 + Ser TGA [ENA] ¡û
>W2011323644 QWVU01000007 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 7536 7625 + Ser TGA [ENA] ¡û
>W2110080282 CAIJZS010000526 Alphaproteobacteria Enhydrobacter aerosaccus [CAIJZS] 5701 5790 + Ser TGA [ENA] ¡û
>W2110082121 CAIMEE010000397 Alphaproteobacteria Enhydrobacter aerosaccus [CAIMEE] 9352 9263 - Ser TGA [ENA] ¡û
>W2110082725 CAIMXB010000492 Alphaproteobacteria Enhydrobacter aerosaccus [CAIMXB] 26457 26368 - Ser TGA [ENA] ¡û
>W2110088120 CAIUPB010000106 Alphaproteobacteria Enhydrobacter aerosaccus [CAIUPB] 1287 1376 + Ser TGA [ENA] ¡û
>W2110089143 CAIWTJ010000124 Alphaproteobacteria Enhydrobacter aerosaccus [CAIWTJ] 11971 11882 - Ser TGA [ENA] ¡û
>W2110474562 JAFCLN010000002 Alphaproteobacteria Bradyrhizobium lablabi SZCCT0009 [JAFCLN] 464780 464691 - Ser TGA [ENA] ¡û
>C231294201 CP091318 Alphaproteobacteria Methylocystis sp. SB2 [CP091318] 2717854 2717765 - Ser TGA - ¡û
>C241174678 CP058907 Alphaproteobacteria Rhodopseudomonas palustris CGMCC 1.2180 [CP058907] 2532090 2532001 - Ser TGA - ¡û
>C241269752 CP126533 Alphaproteobacteria Afipia sp. [CP126533] 1774940 1774851 - Ser TGA - ¡û
>C11116291 CP002821 Alphaproteobacteria Afipia carboxidovorans OM4 [CP002821] 2047059 2046970 - Ser TGA [Ensembl] ¡û
>C121003011 CP002826 Alphaproteobacteria Afipia carboxidovorans OM5 [CP002826] 2045933 2045844 - Ser TGA - ¡û
>W1610784499 LOEV01000072 Alphaproteobacteria Alphaproteobacteria bacterium BRH_c36 [LOEV] 18408 18497 + Ser TGA [ENA] ¡û
>W1610912700 LSIM01000235 Alphaproteobacteria Bradyrhizobium sp. CCH4-A6 [LSIM] 10606 10517 - Ser TGA [ENA] ¡û
>W1610949878 LVEM01000001 Alphaproteobacteria Bradyrhizobium stylosanthis [LVEM] 1358679 1358590 - Ser TGA [ENA] ¡û
>W1710515704 FNBZ01000006 Alphaproteobacteria Bosea robiniae [FNBZ] 288439 288528 + Ser TGA [ENA] ¡û
>W1710548428 FODT01000010 Alphaproteobacteria Rhodopseudomonas pseudopalustris [FODT] 8985 8896 - Ser TGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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