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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.285535 (7 seq.)
>W2011320299
QWLF01000003
Bacillota
Acutalibacter muris WYJ34-Z31 [QWLF]
88341
88265
-
Arg
ACG
[ENA]
¡û
>W2011346621
QZDU01000006
Bacillota
Acutalibacter sp. 1XD8-36 [QZDU]
16408
16332
-
Arg
ACG
[ENA]
¡û
>W2011347165
QZEE01000007
Unclassified
bacterium D16-76 [QZEE]
294
218
-
Arg
ACG
[ENA]
¡û
>W2011366664
RAZF01000010
Bacillota
Acutalibacter sp. 1XD8-33 [RAZF]
113881
113957
+
Arg
ACG
[ENA]
¡û
>W2110125685
CAJTDP010000037
Bacillota
Oscillospiraceae bacterium [CAJTDP]
18650
18726
+
Arg
ACG
[ENA]
¡û
>W2110129099
CAJTHO010000018
Bacillota
Oscillospiraceae bacterium [CAJTHO]
48470
48394
-
Arg
ACG
[ENA]
¡û
>C161087043
CP015400
Bacillota
Hungateiclostridiaceae bacterium KB18 [CP015400]
2766798
2766874
+
Arg
ACG
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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