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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.285947 (249 seq.)
>W1711229975
LXZG01000084
Bacillota
Ligilactobacillus salivarius [LXZG]
4363
4288
-
Gln
CTG
[ENA]
¡û
>W1711345228
MCNR01000005
Bacillota
Ligilactobacillus animalis [MCNR]
71379
71304
-
Gln
CTG
[ENA]
¡û
>W1711632534
MPSN01000003
Bacillota
Ligilactobacillus murinus [MPSN]
65328
65253
-
Gln
CTG
[ENA]
¡û
>W1711683638
MRYO01000007
Bacillota
Ligilactobacillus ruminis [MRYO]
10904
10979
+
Gln
CTG
[ENA]
¡û
>W1711683693
MRYP01000006
Bacillota
Ligilactobacillus ruminis [MRYP]
25593
25668
+
Gln
CTG
[ENA]
¡û
>W1711683754
MRYQ01000006
Bacillota
Ligilactobacillus ruminis [MRYQ]
30414
30489
+
Gln
CTG
[ENA]
¡û
>W1711687585
MSCR01000016
Bacillota
Ligilactobacillus salivarius [MSCR]
25838
25913
+
Gln
CTG
[ENA]
¡û
>W1711943468
NBDX01000008
Bacillota
Ligilactobacillus salivarius [NBDX]
25728
25803
+
Gln
CTG
[ENA]
¡û
>W1711943509
NBDY01000008
Bacillota
Ligilactobacillus salivarius [NBDY]
176086
176161
+
Gln
CTG
[ENA]
¡û
>W1711943545
NBDZ01000008
Bacillota
Ligilactobacillus salivarius [NBDZ]
136948
137023
+
Gln
CTG
[ENA]
¡û
>W1711943592
NBEA01000015
Bacillota
Ligilactobacillus salivarius [NBEA]
157064
156989
-
Gln
CTG
[ENA]
¡û
>W1711943631
NBEB01000035
Bacillota
Ligilactobacillus salivarius [NBEB]
40556
40631
+
Gln
CTG
[ENA]
¡û
>W1711943683
NBEC01000036
Bacillota
Ligilactobacillus salivarius [NBEC]
40556
40631
+
Gln
CTG
[ENA]
¡û
>W1711943728
NBED01000014
Bacillota
Ligilactobacillus salivarius [NBED]
148042
148117
+
Gln
CTG
[ENA]
¡û
>W1711943759
NBEE01000010
Bacillota
Ligilactobacillus salivarius [NBEE]
133417
133492
+
Gln
CTG
[ENA]
¡û
>W1711943807
NBEF01000015
Bacillota
Ligilactobacillus salivarius [NBEF]
3338
3413
+
Gln
CTG
[ENA]
¡û
>W1711943857
NBEG01000011
Bacillota
Ligilactobacillus salivarius [NBEG]
133259
133334
+
Gln
CTG
[ENA]
¡û
>W1711943897
NBEH01000009
Bacillota
Ligilactobacillus salivarius [NBEH]
137123
137198
+
Gln
CTG
[ENA]
¡û
>W1711943942
NBEI01000011
Bacillota
Ligilactobacillus salivarius [NBEI]
137115
137190
+
Gln
CTG
[ENA]
¡û
>W1711943996
NBEJ01000009
Bacillota
Ligilactobacillus salivarius [NBEJ]
61252
61327
+
Gln
CTG
[ENA]
¡û
>W1711944043
NBEK01000010
Bacillota
Ligilactobacillus salivarius [NBEK]
138142
138217
+
Gln
CTG
[ENA]
¡û
>W1711944081
NBEL01000008
Bacillota
Ligilactobacillus salivarius [NBEL]
138197
138272
+
Gln
CTG
[ENA]
¡û
>W1711944133
NBEM01000005
Bacillota
Ligilactobacillus salivarius [NBEM]
148831
148906
+
Gln
CTG
[ENA]
¡û
>W1711944189
NBEN01000006
Bacillota
Ligilactobacillus salivarius [NBEN]
149281
149356
+
Gln
CTG
[ENA]
¡û
>W1711944226
NBEO01000008
Bacillota
Ligilactobacillus salivarius [NBEO]
120080
120155
+
Gln
CTG
[ENA]
¡û
>W1711944274
NBEP01000034
Bacillota
Ligilactobacillus salivarius [NBEP]
15560
15635
+
Gln
CTG
[ENA]
¡û
>W1711944320
NBEQ01000009
Bacillota
Ligilactobacillus salivarius [NBEQ]
61250
61325
+
Gln
CTG
[ENA]
¡û
>W1711944380
NBER01000019
Bacillota
Ligilactobacillus salivarius [NBER]
26070
26145
+
Gln
CTG
[ENA]
¡û
>W1711944420
NBES01000019
Bacillota
Ligilactobacillus salivarius [NBES]
176212
176287
+
Gln
CTG
[ENA]
¡û
>W1711944465
NBET01000014
Bacillota
Ligilactobacillus salivarius [NBET]
134832
134907
+
Gln
CTG
[ENA]
¡û
>W1711944509
NBEU01000007
Bacillota
Ligilactobacillus salivarius [NBEU]
179307
179382
+
Gln
CTG
[ENA]
¡û
>W1711944555
NBEV01000017
Bacillota
Ligilactobacillus salivarius [NBEV]
74761
74836
+
Gln
CTG
[ENA]
¡û
>W1711944610
NBEW01000027
Bacillota
Ligilactobacillus salivarius [NBEW]
26070
26145
+
Gln
CTG
[ENA]
¡û
>W1711944646
NBEX01000032
Bacillota
Ligilactobacillus salivarius [NBEX]
26070
26145
+
Gln
CTG
[ENA]
¡û
>W1711944687
NBEY01000028
Bacillota
Ligilactobacillus salivarius [NBEY]
26070
26145
+
Gln
CTG
[ENA]
¡û
>W1712035973
NFHF01000003
Bacillota
Ligilactobacillus salivarius [NFHF]
29555
29630
+
Gln
CTG
[ENA]
¡û
>W1712036930
NFHV01000024
Bacillota
Ligilactobacillus salivarius [NFHV]
286
361
+
Gln
CTG
[ENA]
¡û
>W1712041932
NFLK01000002
Bacillota
Ligilactobacillus salivarius [NFLK]
26135
26210
+
Gln
CTG
[ENA]
¡û
>C171057142
CP017107
Bacillota
Ligilactobacillus salivarius CICC 23174 [CP017107]
1676327
1676252
-
Gln
CTG
-
¡û
>C171113812
CP020858
Bacillota
Ligilactobacillus salivarius ZLS006 [CP020858]
1196113
1196038
-
Gln
CTG
-
¡û
>C171129017
LT604074
Bacillota
Ligilactobacillus salivarius [LT604074]
1490261
1490336
+
Gln
CTG
-
¡û
>W131144847
AQFS01000032
Bacillota
Ligilactobacillus murinus ASF361 [AQFS]
10046
10121
+
Gln
CTG
[ENA]
¡û
>C012707
CP000233
Bacillota
Ligilactobacillus salivarius UCC118 [CP000233]
624842
624914
+
Gln
CTG
[Ensembl]
¡û
>WENV180290535
OBIU01036208
[OBIU] human gut metagenome; human gut
671
596
-
Gln
CTG
[ENA]
¢þ
>WENV180319874
OBKN01016734
[OBKN] human gut metagenome; human gut
768
693
-
Gln
CTG
[ENA]
¢þ
>WENV180828941
ODKA01036910
[ODKA] human metagenome; G_DNA_Stool
896
821
-
Gln
CTG
[ENA]
¢þ
>WENV181236052
OFEY01021354
[OFEY] mouse gut metagenome; faeces
1214
1287
+
Gln
CTG
[ENA]
¢þ
>WENV181240031
OFFD01059433
[OFFD] mouse gut metagenome; faeces
156
83
-
Gln
CTG
[ENA]
¢þ
>WENV181240590
OFFE01002741
[OFFE] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181241600
OFFF01002542
[OFFF] mouse gut metagenome; faeces
9971
10044
+
Gln
CTG
[ENA]
¢þ
>WENV181242743
OFFG01002205
[OFFG] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181244854
OFFI01001871
[OFFI] mouse gut metagenome; faeces
148
75
-
Gln
CTG
[ENA]
¢þ
>WENV181245868
OFFJ01003019
[OFFJ] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181246980
OFFK01002823
[OFFK] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181252051
OFFP01002688
[OFFP] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181254215
OFFR01001459
[OFFR] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181256325
OFFT01002303
[OFFT] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181257631
OFFU01002387
[OFFU] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181258731
OFFV01002088
[OFFV] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181260974
OFFX01002889
[OFFX] mouse gut metagenome; faeces
147
74
-
Gln
CTG
[ENA]
¢þ
>WENV181262336
OFFY01003246
[OFFY] mouse gut metagenome; faeces
148
75
-
Gln
CTG
[ENA]
¢þ
>WENV181263580
OFFZ01006012
[OFFZ] mouse gut metagenome; faeces
5202
5275
+
Gln
CTG
[ENA]
¢þ
>WENV181264586
OFGA01002955
[OFGA] mouse gut metagenome; faeces
9971
10044
+
Gln
CTG
[ENA]
¢þ
>WENV181265853
OFGB01002422
[OFGB] mouse gut metagenome; faeces
9971
10044
+
Gln
CTG
[ENA]
¢þ
>WENV181268241
OFGD01001784
[OFGD] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181269616
OFGE01003525
[OFGE] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181270922
OFGF01002352
[OFGF] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181272104
OFGG01002422
[OFGG] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181273493
OFGH01002454
[OFGH] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181276540
OFGK01008326
[OFGK] mouse gut metagenome; faeces
173
100
-
Gln
CTG
[ENA]
¢þ
>WENV181277548
OFGL01005536
[OFGL] mouse gut metagenome; faeces
1097
1170
+
Gln
CTG
[ENA]
¢þ
>WENV181278475
OFGM01002076
[OFGM] mouse gut metagenome; faeces
141
68
-
Gln
CTG
[ENA]
¢þ
>WENV181279701
OFGN01002348
[OFGN] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181280871
OFGO01002591
[OFGO] mouse gut metagenome; faeces
9971
10044
+
Gln
CTG
[ENA]
¢þ
>WENV181283358
OFGQ01002573
[OFGQ] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181284620
OFGR01003126
[OFGR] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181287277
OFGX01002338
[OFGX] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181289851
OFHA01002666
[OFHA] mouse gut metagenome; faeces
9971
10044
+
Gln
CTG
[ENA]
¢þ
>WENV181299199
OFHM01002602
[OFHM] mouse gut metagenome; faeces
177
104
-
Gln
CTG
[ENA]
¢þ
>WENV181300596
OFHN01002677
[OFHN] mouse gut metagenome; faeces
148
75
-
Gln
CTG
[ENA]
¢þ
>WENV181301736
OFHO01000885
[OFHO] mouse gut metagenome; faeces
9970
10043
+
Gln
CTG
[ENA]
¢þ
>WENV181329930
OFLY01000619
[OFLY] human gut metagenome; human gut
27605
27530
-
Gln
CTG
[ENA]
¢þ
>WENV181333538
OFMB01000379
[OFMB] human gut metagenome; human gut
967
1042
+
Gln
CTG
[ENA]
¢þ
>WENV181355009
OFMT01000246
[OFMT] human gut metagenome; human gut
27605
27530
-
Gln
CTG
[ENA]
¢þ
>WENV181356365
OFMU01000008
[OFMU] human gut metagenome; human gut
189028
189101
+
Gln
CTG
[ENA]
¢þ
>WENV181427985
OGCU01000567
[OGCU] metagenome; Human gut stool
4227
4152
-
Gln
CTG
[ENA]
¢þ
>WENV181428631
OGCW01000012
[OGCW] metagenome; Human gut stool
137464
137539
+
Gln
CTG
[ENA]
¢þ
>WENV181429136
OGCX01000041
[OGCX] metagenome; Human gut stool
27082
27007
-
Gln
CTG
[ENA]
¢þ
>WENV181451973
OGDY01041619
[OGDY] metagenome; Human gut stool
508
433
-
Gln
CTG
[ENA]
¢þ
>WENV181454095
OGEC01009161
[OGEC] metagenome; Human gut stool
1076
1001
-
Gln
CTG
[ENA]
¢þ
>WENV181454646
OGED01017379
[OGED] metagenome; Human gut stool
184
259
+
Gln
CTG
[ENA]
¢þ
>WENV181457885
OGEJ01000014
[OGEJ] metagenome; Human gut stool
137359
137434
+
Gln
CTG
[ENA]
¢þ
>WENV181463807
OGEO01045835
[OGEO] metagenome; Human gut stool
413
489
+
Gln
CTG
[ENA]
¢þ
>WENV181468022
OGES01000211
[OGES] metagenome; Human gut stool
36429
36354
-
Gln
CTG
[ENA]
¢þ
>WENV181473399
OGFB01003078
[OGFB] metagenome; Human gut stool
909
834
-
Gln
CTG
[ENA]
¢þ
>WENV181483100
OGFK01000602
[OGFK] metagenome; Human gut stool
25801
25876
+
Gln
CTG
[ENA]
¢þ
>WENV181484738
OGFL01014749
[OGFL] metagenome; Human gut stool
40
115
+
Gln
CTG
[ENA]
¢þ
>W141146930
AWWH01000013
Bacillota
Ligilactobacillus equi DPC 6820 [AWWH]
24013
23938
-
Gln
CTG
[ENA]
¡û
>WENV181494472
OGGB01001931
[OGGB] metagenome; Human gut stool
4220
4145
-
Gln
CTG
[ENA]
¢þ
>WENV181501666
OGGI01000970
[OGGI] metagenome; Human gut stool
23380
23455
+
Gln
CTG
[ENA]
¢þ
>WENV181505976
OGGM01000014
[OGGM] metagenome; Human gut stool
52961
52886
-
Gln
CTG
[ENA]
¢þ
>WENV181506671
OGGN01001977
[OGGN] metagenome; Human gut stool
1046
1121
+
Gln
CTG
[ENA]
¢þ
>WENV181518630
OGHB01000008
[OGHB] metagenome; Human gut stool
133724
133799
+
Gln
CTG
[ENA]
¢þ
>WENV181525062
OGHJ01000002
[OGHJ] metagenome; Human gut stool
316228
316153
-
Gln
CTG
[ENA]
¢þ
>WENV181537257
OGHW01003939
[OGHW] metagenome; Human gut stool
4809
4734
-
Gln
CTG
[ENA]
¢þ
>WENV181538233
OGHY01003049
[OGHY] metagenome; Human gut stool
5333
5258
-
Gln
CTG
[ENA]
¢þ
>WENV181539133
OGHZ01001727
[OGHZ] metagenome; Human gut stool
1283
1358
+
Gln
CTG
[ENA]
¢þ
>WENV181541054
OGIC01001004
[OGIC] metagenome; Human gut stool
2824
2749
-
Gln
CTG
[ENA]
¢þ
>WENV181550638
OGIN01000015
[OGIN] metagenome; Human gut stool
137346
137421
+
Gln
CTG
[ENA]
¢þ
>WENV181556561
OGIV01000002
[OGIV] metagenome; Human gut stool
142708
142633
-
Gln
CTG
[ENA]
¢þ
>WENV181558191
OGIX01000007
[OGIX] metagenome; Human gut stool
173731
173656
-
Gln
CTG
[ENA]
¢þ
>WENV181570719
OGJO01000002
[OGJO] metagenome; Human gut stool
134078
134153
+
Gln
CTG
[ENA]
¢þ
>WENV181576108
OGJV01000456
[OGJV] metagenome; Human gut stool
2318
2393
+
Gln
CTG
[ENA]
¢þ
>WENV181581880
OGKB01000043
[OGKB] metagenome; Human gut stool
70892
70817
-
Gln
CTG
[ENA]
¢þ
>WENV181587808
OGKH01000014
[OGKH] metagenome; Human gut stool
133286
133361
+
Gln
CTG
[ENA]
¢þ
>WENV181589676
OGKM01000012
[OGKM] metagenome; Human gut stool
134986
135061
+
Gln
CTG
[ENA]
¢þ
>WENV181684482
OGOV01010178
[OGOV] human gut metagenome; faeces
3413
3488
+
Gln
CTG
[ENA]
¢þ
>WENV181714196
OGPR01000810
[OGPR] human gut metagenome; faeces
1730
1805
+
Gln
CTG
[ENA]
¢þ
>WENV181736631
OGQH01000972
[OGQH] human gut metagenome; faeces
27639
27564
-
Gln
CTG
[ENA]
¢þ
>WENV181785782
OGRN01000101
[OGRN] human gut metagenome; faeces
50287
50362
+
Gln
CTG
[ENA]
¢þ
>WENV181973212
OHAA01017769
[OHAA] human gut metagenome; faeces
512
587
+
Gln
CTG
[ENA]
¢þ
>WENV181993342
OHAS01000537
[OHAS] human gut metagenome; faeces
6955
6880
-
Gln
CTG
[ENA]
¢þ
>WENV182295995
OHWG01000231
[OHWG] human gut metagenome; feces
28336
28261
-
Gln
CTG
[ENA]
¢þ
>W141229028
BAMI01000028
Bacillota
Ligilactobacillus equi JCM 10991 [BAMI]
23960
23885
-
Gln
CTG
[ENA]
¡û
>W141229115
BAML01000003
Bacillota
Ligilactobacillus hayakitensis JCM 14209 [BAML]
3481
3555
+
Gln
CTG
[ENA]
¡û
>W141229189
BAMM01000003
Bacillota
Ligilactobacillus apodemi JCM 16172 [BAMM]
29151
29076
-
Gln
CTG
[ENA]
¡û
>WENV182360009
OICB01000049
[OICB] human gut metagenome; feces
28304
28229
-
Gln
CTG
[ENA]
¢þ
>WENV182370325
OICT01000049
[OICT] human gut metagenome; feces
49190
49265
+
Gln
CTG
[ENA]
¢þ
>WENV182371667
OICU01024381
[OICU] human gut metagenome; feces
325
250
-
Gln
CTG
[ENA]
¢þ
>WENV182375623
OIDD01000053
[OIDD] human gut metagenome; feces
27585
27510
-
Gln
CTG
[ENA]
¢þ
>WENV182390238
OIED01048992
[OIED] human gut metagenome; feces
300
375
+
Gln
CTG
[ENA]
¢þ
>W141256161
CBVR010000033
Bacillota
Ligilactobacillus salivarius cp400 [CBVR]
723
798
+
Gln
CTG
[ENA]
¡û
>WENV182952519
OKVW01001802
[OKVW] human gut metagenome; human gut
7994
8069
+
Gln
CTG
[ENA]
¢þ
>WENV183132137
OLOB01000544
[OLOB] human gut metagenome; faeces
26065
26140
+
Gln
CTG
[ENA]
¢þ
>WENV183217973
OLQI01005460
[OLQI] human gut metagenome; faeces
4231
4156
-
Gln
CTG
[ENA]
¢þ
>WENV183284371
OLSD01015173
[OLSD] human gut metagenome; faeces
1824
1897
+
Gln
CTG
[ENA]
¢þ
>WENV183407120
OMAC01000041
[OMAC] human gut metagenome; feces
173
98
-
Gln
CTG
[ENA]
¢þ
>WENV183427384
OMBN01000002
[OMBN] human gut metagenome; feces
255481
255406
-
Gln
CTG
[ENA]
¢þ
>WENV183428463
OMBO01000007
[OMBO] human gut metagenome; feces
233230
233155
-
Gln
CTG
[ENA]
¢þ
>WENV183472636
OMER01000003
[OMER] human gut metagenome; feces
161855
161780
-
Gln
CTG
[ENA]
¢þ
>WENV183493749
OMGJ01002629
[OMGJ] human gut metagenome; human gut
4177
4252
+
Gln
CTG
[ENA]
¢þ
>WENV183553066
OOBK01000358
[OOBK] human gut metagenome; human gut
17145
17220
+
Gln
CTG
[ENA]
¢þ
>WENV183560983
OOBU01004263
[OOBU] human gut metagenome; human gut
1022
1097
+
Gln
CTG
[ENA]
¢þ
>WENV183605704
OODN01000001
[OODN] human gut metagenome; human gut
267698
267623
-
Gln
CTG
[ENA]
¢þ
>WENV183723261
PDYJ01000841
[PDYJ] gut metagenome; fecal pellets
7021
7094
+
Gln
CTG
[ENA]
¢þ
>WENV183767134
PPYE01361238
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
4184
4109
-
Gln
CTG
[ENA]
¢þ
>WENV183788581
PPYF01370182
[PPYF] human gut metagenome; stool from patient with Crohn's disease
188955
189028
+
Gln
CTG
[ENA]
¢þ
>C181020734
CP016766
Bacillota
Ligilactobacillus agilis La3 [CP016766]
460779
460853
+
Gln
CTG
-
¡û
>C181084713
CP023565
Bacillota
Ligilactobacillus murinus CR147 [CP023565]
1088676
1088749
+
Gln
CTG
-
¡û
>C181084833
CP023566
Bacillota
Ligilactobacillus murinus CR141 [CP023566]
1250211
1250138
-
Gln
CTG
-
¡û
>C181182039
CP029616
Bacillota
Ligilactobacillus salivarius DJ-sa-01 [CP029616]
1578981
1579056
+
Gln
CTG
-
¡û
>C191172116
CP039849
Bacillota
Ligilactobacillus animalis LL1 [CP039849]
708756
708683
-
Gln
CTG
-
¡û
>W141699189
JMHU01000021
Bacillota
Ligilactobacillus animalis [JMHU]
70780
70705
-
Gln
CTG
[ENA]
¡û
>W09123099
ACGS01000004
Bacillota
Ligilactobacillus ruminis ATCC 25644 [ACGS]
27674
27599
-
Gln
CTG
[ENA]
¡û
>W09123156
ACGT01000001
Bacillota
Ligilactobacillus salivarius ATCC 11741 [ACGT]
138849
138924
+
Gln
CTG
[ENA]
¡û
>W1910067646
BFFP01000059
Bacillota
Ligilactobacillus salitolerans YK43 [BFFP]
4901
4975
+
Gln
CTG
[ENA]
¡û
>W1910611628
LFJL01000019
Bacillota
Ligilactobacillus animalis 09-2317 [LFJL]
71127
71054
-
Gln
CTG
[ENA]
¡û
>W1910611679
LFJM01000018
Bacillota
Ligilactobacillus animalis 14-7927 [LFJM]
71127
71054
-
Gln
CTG
[ENA]
¡û
>W1910642983
LUGD01000097
Bacillota
Ligilactobacillus agilis UMNLA4 [LUGD]
33972
34046
+
Gln
CTG
[ENA]
¡û
>W1910643078
LUGE01000094
Bacillota
Ligilactobacillus agilis UMNLA5 [LUGE]
123
49
-
Gln
CTG
[ENA]
¡û
>W1910643157
LUGO01000082
Bacillota
Ligilactobacillus agilis UMNLA1 [LUGO]
30878
30952
+
Gln
CTG
[ENA]
¡û
>W1910643244
LUGP01000089
Bacillota
Ligilactobacillus agilis UMNLA2 [LUGP]
122
48
-
Gln
CTG
[ENA]
¡û
>W1910643293
LUGQ01000075
Bacillota
Ligilactobacillus agilis UMNLA3 [LUGQ]
33964
34038
+
Gln
CTG
[ENA]
¡û
>W1910649416
LXYX01000140
Bacillota
Ligilactobacillus salivarius KLW010 [LXYX]
22973
22898
-
Gln
CTG
[ENA]
¡û
>W1910649473
LXYY01000017
Bacillota
Ligilactobacillus salivarius KLW009 [LXYY]
4303
4228
-
Gln
CTG
[ENA]
¡û
>W1910649527
LXYZ01000079
Bacillota
Ligilactobacillus salivarius KLW008 [LXYZ]
4365
4290
-
Gln
CTG
[ENA]
¡û
>W1910649560
LXZA01000022
Bacillota
Ligilactobacillus salivarius KLW007 [LXZA]
22653
22578
-
Gln
CTG
[ENA]
¡û
>W1910649635
LXZB01000045
Bacillota
Ligilactobacillus salivarius KLW006 [LXZB]
22895
22820
-
Gln
CTG
[ENA]
¡û
>W1910649694
LXZC01000015
Bacillota
Ligilactobacillus salivarius KLW005 [LXZC]
4361
4286
-
Gln
CTG
[ENA]
¡û
>W1910649760
LXZD01000167
Bacillota
Ligilactobacillus salivarius KLW004 [LXZD]
26068
26143
+
Gln
CTG
[ENA]
¡û
>W1910649804
LXZE01000166
Bacillota
Ligilactobacillus salivarius KLW003 [LXZE]
26134
26209
+
Gln
CTG
[ENA]
¡û
>W1910649840
LXZF01000022
Bacillota
Ligilactobacillus salivarius KLW002 [LXZF]
4363
4288
-
Gln
CTG
[ENA]
¡û
>W1910649910
LXZH01000042
Bacillota
Ligilactobacillus salivarius KLF007 [LXZH]
2627
2702
+
Gln
CTG
[ENA]
¡û
>W1910649945
LXZJ01000033
Bacillota
Ligilactobacillus salivarius KLF005 [LXZJ]
26081
26156
+
Gln
CTG
[ENA]
¡û
>W1910650039
LXZK01000055
Bacillota
Ligilactobacillus salivarius KLF004 [LXZK]
251
326
+
Gln
CTG
[ENA]
¡û
>W1910650057
LXZL01000044
Bacillota
Ligilactobacillus salivarius KLF003 [LXZL]
187
112
-
Gln
CTG
[ENA]
¡û
>W1910650148
LXZM01000093
Bacillota
Ligilactobacillus salivarius KLF002 [LXZM]
254
329
+
Gln
CTG
[ENA]
¡û
>W1910650157
LXZO01000022
Bacillota
Ligilactobacillus salivarius KLA006 [LXZO]
30548
30623
+
Gln
CTG
[ENA]
¡û
>W1910650219
LXZP01000004
Bacillota
Ligilactobacillus salivarius KLA005 [LXZP]
17634
17559
-
Gln
CTG
[ENA]
¡û
>W1910650283
LXZQ01000014
Bacillota
Ligilactobacillus salivarius KLA004 [LXZQ]
17635
17560
-
Gln
CTG
[ENA]
¡û
>W1910650325
LXZR01000011
Bacillota
Ligilactobacillus salivarius KLA003 [LXZR]
30548
30623
+
Gln
CTG
[ENA]
¡û
>W1910650390
LXZS01000003
Bacillota
Ligilactobacillus salivarius KLA002 [LXZS]
17634
17559
-
Gln
CTG
[ENA]
¡û
>W1910650455
LXZT01000011
Bacillota
Ligilactobacillus salivarius KLA001 [LXZT]
30544
30619
+
Gln
CTG
[ENA]
¡û
>W1910652386
LYQO01000078
Bacillota
Ligilactobacillus agilis UMNLA6 [LYQO]
33986
34060
+
Gln
CTG
[ENA]
¡û
>W1910652424
LYQP01000042
Bacillota
Ligilactobacillus agilis UMNLA7 [LYQP]
122
48
-
Gln
CTG
[ENA]
¡û
>W1910652554
LYQQ01000053
Bacillota
Ligilactobacillus agilis UMNLA8 [LYQQ]
33595
33669
+
Gln
CTG
[ENA]
¡û
>W1910874527
NDYW01000012
Bacillota
Ligilactobacillus salivarius L28 [NDYW]
22803
22728
-
Gln
CTG
[ENA]
¡û
>W1911569773
PCZA01000002
Bacillota
Lactobacillus sp. UMNPBX9 [PCZA]
106314
106389
+
Gln
CTG
[ENA]
¡û
>W1911570172
PCZH01000001
Bacillota
Lactobacillus sp. UMNPBX2 [PCZH]
34667
34592
-
Gln
CTG
[ENA]
¡û
>W1911754046
QWMU01000081
Bacillota
Ligilactobacillus murinus 510-9 [QWMU]
9992
10065
+
Gln
CTG
[ENA]
¡û
>W1911814465
QZFR01000083
Bacillota
Ligilactobacillus murinus C-30 [QZFR]
10262
10335
+
Gln
CTG
[ENA]
¡û
>W1810070450
PECX01000001
Bacillota
Ligilactobacillus salivarius SGL 03 [PECX]
1111974
1111899
-
Gln
CTG
[ENA]
¡û
>W1810185639
PKGI01000004
Bacillota
Ligilactobacillus agilis 268A [PKGI]
61906
61832
-
Gln
CTG
[ENA]
¡û
>W1810185897
PKGM01000014
Bacillota
Ligilactobacillus agilis 273 [PKGM]
55505
55579
+
Gln
CTG
[ENA]
¡û
>W1810185966
PKGN01000007
Bacillota
Ligilactobacillus salivarius 290 [PKGN]
92814
92739
-
Gln
CTG
[ENA]
¡û
>W1810225259
POVP01000004
Bacillota
Ligilactobacillus animalis NP51 [POVP]
189440
189513
+
Gln
CTG
[ENA]
¡û
>W1810472375
QAGU01000001
Bacillota
Ligilactobacillus salivarius DS2_12 [QAGU]
138976
139051
+
Gln
CTG
[ENA]
¡û
>W1810472446
QAGV01000001
Bacillota
Ligilactobacillus salivarius DS11_12 [QAGV]
383742
383667
-
Gln
CTG
[ENA]
¡û
>W1810488207
QAZF01000001
Bacillota
Ligilactobacillus salivarius DS3_12 [QAZF]
336771
336696
-
Gln
CTG
[ENA]
¡û
>W1810488262
QAZG01000003
Bacillota
Ligilactobacillus salivarius DS13_12 [QAZG]
34869
34794
-
Gln
CTG
[ENA]
¡û
>W1810584333
QFAS01000004
Bacillota
Ligilactobacillus salivarius A3iob [QFAS]
135355
135430
+
Gln
CTG
[ENA]
¡û
>W1810797340
QRMK01000005
Bacillota
Ligilactobacillus salivarius AM09-40 [QRMK]
36095
36170
+
Gln
CTG
[ENA]
¡û
>W1810829778
QSLH01000001
Bacillota
Ligilactobacillus salivarius AM25-8 [QSLH]
134028
134103
+
Gln
CTG
[ENA]
¡û
>W1810834728
QSQR01000002
Bacillota
Ligilactobacillus ruminis TF10-9AT [QSQR]
63462
63387
-
Gln
CTG
[ENA]
¡û
>W1810838148
QSTB01000001
Bacillota
Ligilactobacillus salivarius OM08-20 [QSTB]
51316
51391
+
Gln
CTG
[ENA]
¡û
>C151030937
CP007646
Bacillota
Ligilactobacillus salivarius JCM1046 [CP007646]
628184
628259
+
Gln
CTG
[Ensembl]
¡û
>C151082316
CP011403
Bacillota
Ligilactobacillus salivarius str. Ren [CP011403]
619570
619645
+
Gln
CTG
[Ensembl]
¡û
>W10124288
AEBA01000141
Bacillota
Ligilactobacillus salivarius ACS-116-V-Col5a [AEBA]
4175
4100
-
Gln
CTG
[ENA]
¡û
>C10109053
CP002034
Bacillota
Ligilactobacillus salivarius CECT 5713 [CP002034]
625445
625520
+
Gln
CTG
[Ensembl]
¡û
>W1510650386
CVQY01000022
Bacillota
Ligilactobacillus agilis Marseille [CVQY]
110456
110530
+
Gln
CTG
[ENA]
¡û
>W1511007742
JHAB01000039
Bacillota
Ligilactobacillus ruminis DPC 6830 [JHAB]
60443
60368
-
Gln
CTG
[ENA]
¡û
>W1511008078
JHAJ01000095
Bacillota
Ligilactobacillus ruminis ATCC 27780 [JHAJ]
497
422
-
Gln
CTG
[ENA]
¡û
>W1511441059
JUQA01000063
Bacillota
Ligilactobacillus salivarius 866_LSAL [JUQA]
4230
4155
-
Gln
CTG
[ENA]
¡û
>W1511443830
JUTI01000045
Bacillota
Ligilactobacillus salivarius 778_LSAL [JUTI]
19311
19236
-
Gln
CTG
[ENA]
¡û
>W1511448794
JVAF01000038
Bacillota
Ligilactobacillus salivarius 609_LSAL [JVAF]
12679
12754
+
Gln
CTG
[ENA]
¡û
>W11131175
AEBA01000141
Bacillota
Ligilactobacillus salivarius ACS-116-V-Col5a [AEBA]
4175
4100
-
Gln
CTG
[ENA]
¡û
>W11141796
AEOF01000017
Bacillota
Ligilactobacillus animalis KCTC 3501 [AEOF]
65317
65242
-
Gln
CTG
[ENA]
¡û
>W11167214
AFMN01000001
Bacillota
Ligilactobacillus salivarius NIAS840 [AFMN]
1104052
1104127
+
Gln
CTG
[ENA]
¡û
>W11168616
AFOI01000004
Bacillota
Ligilactobacillus salivarius GJ-24 [AFOI]
296793
296718
-
Gln
CTG
[ENA]
¡û
>W11168640
AFOJ01000002
Bacillota
Ligilactobacillus ruminis SPM0211 [AFOJ]
539893
539968
+
Gln
CTG
[ENA]
¡û
>W11176984
AFYE01000085
Bacillota
Ligilactobacillus ruminis ATCC 25644 [AFYE]
358
433
+
Gln
CTG
[ENA]
¡û
>C121004236
CP003032
Bacillota
Ligilactobacillus ruminis ATCC 27782 [CP003032]
1442969
1443044
+
Gln
CTG
[Ensembl]
¡û
>W121045142
AICL01000003
Bacillota
Ligilactobacillus salivarius SMXD51 [AICL]
801353
801428
+
Gln
CTG
[ENA]
¡û
>W1610029428
AWYA01000059
Bacillota
Ligilactobacillus ruminis DPC 6832 [AWYA]
60472
60397
-
Gln
CTG
[ENA]
¡û
>W1610029470
AWYB01000418
Bacillota
Ligilactobacillus ruminis S23 [AWYB]
1070
1145
+
Gln
CTG
[ENA]
¡û
>W1610030978
AYYL01000024
Bacillota
Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [AYYL]
25496
25571
+
Gln
CTG
[ENA]
¡û
>W1610031047
AYYN01000035
Bacillota
Ligilactobacillus murinus DSM 20452 = NBRC 14221 [AYYN]
10873
10948
+
Gln
CTG
[ENA]
¡û
>W1610031181
AYYP01000026
Bacillota
Ligilactobacillus agilis DSM 20509 [AYYP]
12721
12795
+
Gln
CTG
[ENA]
¡û
>W1610031401
AYYT01000003
Bacillota
Ligilactobacillus salivarius DSM 20555 = ATCC 11741 [AYYT]
137175
137250
+
Gln
CTG
[ENA]
¡û
>W1610031500
AYYW01000002
Bacillota
Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]
1935
2010
+
Gln
CTG
[ENA]
¡û
>W1610036441
AZFH01000057
Bacillota
Ligilactobacillus equi DSM 15833 = JCM 10991 [AZFH]
732
807
+
Gln
CTG
[ENA]
¡û
>W1610037054
AZFT01000053
Bacillota
Ligilactobacillus apodemi DSM 16634 = JCM 16172 [AZFT]
924993
925068
+
Gln
CTG
[ENA]
¡û
>W1610037609
AZGD01000090
Bacillota
Ligilactobacillus hayakitensis DSM 18933 = JCM 14209 [AZGD]
99287
99213
-
Gln
CTG
[ENA]
¡û
>W1610072836
BCVJ01000041
Bacillota
Ligilactobacillus murinus DSM 20452 = NBRC 14221 [BCVJ]
7357
7282
-
Gln
CTG
[ENA]
¡û
>W1610073244
BCVU01000023
Bacillota
Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [BCVU]
207
132
-
Gln
CTG
[ENA]
¡û
>W1710026798
AWYA01000059
Bacillota
Ligilactobacillus ruminis DPC 6832 [AWYA]
60472
60397
-
Gln
CTG
[ENA]
¡û
>W1710026840
AWYB01000418
Bacillota
Ligilactobacillus ruminis S23 [AWYB]
1070
1145
+
Gln
CTG
[ENA]
¡û
>W1710027930
AYYL01000024
Bacillota
Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [AYYL]
25496
25571
+
Gln
CTG
[ENA]
¡û
>W1710027999
AYYN01000035
Bacillota
Ligilactobacillus murinus DSM 20452 = NBRC 14221 [AYYN]
10873
10948
+
Gln
CTG
[ENA]
¡û
>W1710028133
AYYP01000026
Bacillota
Ligilactobacillus agilis DSM 20509 [AYYP]
12721
12795
+
Gln
CTG
[ENA]
¡û
>W1710028427
AYYW01000002
Bacillota
Ligilactobacillus animalis KCTC 3501 = DSM 20602 [AYYW]
1935
2010
+
Gln
CTG
[ENA]
¡û
>W1710033480
AZFH01000057
Bacillota
Ligilactobacillus equi DSM 15833 = JCM 10991 [AZFH]
732
807
+
Gln
CTG
[ENA]
¡û
>W1710034093
AZFT01000053
Bacillota
Ligilactobacillus apodemi DSM 16634 = JCM 16172 [AZFT]
924993
925068
+
Gln
CTG
[ENA]
¡û
>W1710034648
AZGD01000090
Bacillota
Ligilactobacillus hayakitensis DSM 18933 = JCM 14209 [AZGD]
99287
99213
-
Gln
CTG
[ENA]
¡û
>W1710069954
BCVJ01000041
Bacillota
Ligilactobacillus murinus DSM 20452 = NBRC 14221 [BCVJ]
7357
7282
-
Gln
CTG
[ENA]
¡û
>W1710070362
BCVU01000023
Bacillota
Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [BCVU]
207
132
-
Gln
CTG
[ENA]
¡û
>W1710081629
BDFM01000246
Bacillota
Ligilactobacillus murinus [BDFM]
342
267
-
Gln
CTG
[ENA]
¡û
>W1710546290
FOCC01000004
Bacillota
Ligilactobacillus ruminis [FOCC]
44678
44603
-
Gln
CTG
[ENA]
¡û
>W1710562948
FOPI01000007
Bacillota
Ligilactobacillus ruminis DSM 20403 = NBRC 102161 [FOPI]
25747
25822
+
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
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Representative sequence of each cluster
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