This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.286137 (13 seq.)
>WENV181237540
OFFB01000459
[OFFB] mouse gut metagenome; faeces
10847
10773
-
Lys
TTT
[ENA]
¡û
>WENV181246426
OFFJ01058948
[OFFJ] mouse gut metagenome; faeces
176
250
+
Lys
TTT
[ENA]
¡û
>WENV181250019
OFFN01000489
[OFFN] mouse gut metagenome; faeces
28394
28468
+
Lys
TTT
[ENA]
¡û
>WENV181251639
OFFO01058259
[OFFO] mouse gut metagenome; faeces
36
110
+
Lys
TTT
[ENA]
¡û
>WENV181267180
OFGC01001287
[OFGC] mouse gut metagenome; faeces
791
865
+
Lys
TTT
[ENA]
¡û
>WENV181275242
OFGJ01000401
[OFGJ] mouse gut metagenome; faeces
26956
27030
+
Lys
TTT
[ENA]
¡û
>W2010140080
BLLY01000328
Bacillota
Lachnospiraceae bacterium [BLLY]
12888
12962
+
Lys
TTT
[ENA]
¡û
>W2010140140
BLMA01000157
Bacillota
Lachnospiraceae bacterium [BLMA]
563
489
-
Lys
TTT
[ENA]
¡û
>W2011337098
QXWO01000069
Bacillota
Lachnospiraceae bacterium 1XD21-87 [QXWO]
14201
14275
+
Lys
TTT
[ENA]
¡û
>W2011365508
RAYM01000068
Unclassified
bacterium 1xD42-87 [RAYM]
12813
12739
-
Lys
TTT
[ENA]
¡û
>W2110126320
CAJTEN010000058
Bacillota
Clostridia bacterium [CAJTEN]
9692
9618
-
Lys
TTT
[ENA]
¡û
>W2110126497
CAJTET010000053
Bacillota
Clostridia bacterium [CAJTET]
6898
6824
-
Lys
TTT
[ENA]
¡û
>W2110126857
CAJTFE010000053
Bacillota
Clostridia bacterium [CAJTFE]
6824
6750
-
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK