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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.291442 (6 seq.)
>W131054682
ANAY01000007
Actinomycetota
Nocardiopsis kunsanensis DSM 44524 [ANAY]
120199
120272
+
Asn
GTT
[ENA]
¡û
>W131054683
ANAY01000007
Actinomycetota
Nocardiopsis kunsanensis DSM 44524 [ANAY]
120420
120493
+
Asn
GTT
[ENA]
¡û
>W131055018
ANBE01000007
Actinomycetota
Nocardiopsis xinjiangensis YIM 90004 [ANBE]
335219
335146
-
Asn
GTT
[ENA]
¡û
>W131055019
ANBE01000007
Actinomycetota
Nocardiopsis xinjiangensis YIM 90004 [ANBE]
334999
334926
-
Asn
GTT
[ENA]
¡û
>W2110047626
BMXL01000001
Actinomycetota
Nocardiopsis litoralis KCTC 19473 [BMXL]
169484
169557
+
Asn
GTT
[ENA]
¡û
>W2110047627
BMXL01000001
Actinomycetota
Nocardiopsis litoralis KCTC 19473 [BMXL]
169705
169778
+
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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