This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.294226 (7 seq.)
>WENV181242197
OFFF01073001
[OFFF] mouse gut metagenome; faeces
411
336
-
Thr
TGT
[ENA]
¡û
>WENV181256786
OFFT01031618
[OFFT] mouse gut metagenome; faeces
979
904
-
Thr
TGT
[ENA]
¡û
>WENV181270133
OFGE01034955
[OFGE] mouse gut metagenome; faeces
221
146
-
Thr
TGT
[ENA]
¡û
>WENV181283630
OFGQ01010302
[OFGQ] mouse gut metagenome; faeces
2379
2454
+
Thr
TGT
[ENA]
¡û
>WENV181284901
OFGR01011962
[OFGR] mouse gut metagenome; faeces
2316
2391
+
Thr
TGT
[ENA]
¡û
>WENV181287911
OFGX01082873
[OFGX] mouse gut metagenome; faeces
111
186
+
Thr
TGT
[ENA]
¡û
>WENV183634869
OOIH01000580
[OOIH] metagenome; unknown
2980
2905
-
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK