tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.295849 (113 seq.)
>W1710862432 LMEJ01000011 Alphaproteobacteria Sphingomonas sp. Root1294 [LMEJ] 198178 198103 - Trp CCA [ENA] ¡û
>W1710863905 LMFM01000001 Alphaproteobacteria Sphingomonas sp. Root50 [LMFM] 198135 198060 - Trp CCA [ENA] ¡û
>W1710866240 LMHH01000003 Alphaproteobacteria Altererythrobacter sp. Root672 [LMHH] 463536 463611 + Trp CCA [ENA] ¡û
>W1710867305 LMID01000015 Alphaproteobacteria Sphingomonas sp. Root720 [LMID] 329620 329695 + Trp CCA [ENA] ¡û
>W1711074447 LSJO01000019 Alphaproteobacteria Sphingomonas sp. CCH9-F2 [LSJO] 9105 9030 - Trp CCA [ENA] ¡û
>W1711386365 MEFG01000018 Alphaproteobacteria Sphingomonas sp. SCN 67-18 [MEFG] 66856 66931 + Trp CCA [ENA] ¡û
>W1711705054 MSQB01000026 Alphaproteobacteria Novosphingobium panipatense [MSQB] 57990 57915 - Trp CCA [ENA] ¡û
>C171056590 CP017075 Alphaproteobacteria Novosphingobium resinovorum SA1 [CP017075] 1884702 1884627 - Trp CCA - ¡û
>C171075863 CP018221 Alphaproteobacteria Tardibacter chloracetimidivorans JJ-A5 [CP018221] 165739 165814 + Trp CCA - ¡û
>W131213841 ATTI01000001 Alphaproteobacteria Sphingomonas phyllosphaerae 5.2 [ATTI] 3257250 3257325 + Trp CCA [ENA] ¡û
>W131219258 ATYK01000002 Alphaproteobacteria Sphingomonas phyllosphaerae FA2 [ATYK] 1515653 1515728 + Trp CCA [ENA] ¡û
>WENV180020096 FTCV01001805 [FTCV] metagenome; soil 8342 8267 - Trp CCA [ENA] ¡û
>WENV180311013 OBJT01086342 [OBJT] soil metagenome; soil 118 43 - Trp CCA [ENA] ¡û
>WENV183636275 OOKD01000015 [OOKD] human gut metagenome; Skin biopsy 141807 141882 + Trp CCA [ENA] ¡û
>WENV183673399 ORJL011272838 [ORJL] groundwater metagenome; groundwater 5 80 + Leu CAA [ENA] ¡û
>WENV183679845 ORMF010112100 [ORMF] groundwater metagenome; groundwater 192 267 + Trp CCA [ENA] ¡û
>WENV183729155 PJTQ01007369 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 1416 1341 - Trp CCA [ENA] ¡û
>WENV183730406 PJTS01000005 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 103434 103359 - Trp CCA [ENA] ¡û
>WENV183731485 PJTT01000008 [PJTT] soil metagenome; Soil (2) enriched on wood chips 563603 563678 + Trp CCA [ENA] ¡û
>WENV183731557 PJTT01000022 [PJTT] soil metagenome; Soil (2) enriched on wood chips 103434 103359 - Trp CCA [ENA] ¡û
>WENV183740738 PJUF01008177 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 535 610 + Trp CCA [ENA] ¡û
>WENV170003526 AGTN01367344 [AGTN] bioreactor metagenome; poplar biomass 20 95 + Trp CCA [ENA] ¡û
>WENV170121467 CENM01028077 [CENM] marine metagenome genome assembly TARA_032_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 900 825 - Trp CCA [ENA] ¡û
>WENV170668208 LADL02001870 [LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole 12606 12531 - Trp CCA [ENA] ¡û
>WENV170991841 MWWA01344053 [MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil 158 233 + Trp CCA [ENA] ¡û
>W141484924 JFYZ01000002 Alphaproteobacteria Novosphingobium resinovorum [JFYZ] 48131 48206 + Trp CCA [ENA] ¡û
>C181081632 CP023449 Alphaproteobacteria Rhizorhabdus dicambivorans Ndbn-20 [CP023449] 682349 682274 - Trp CCA - ¡û
>C191144175 CP035501 Alphaproteobacteria Sphingosinicella sp. BN140058 [CP035501] 4121307 4121232 - Trp CCA - ¡û
>W141564477 JIAU01000006 Alphaproteobacteria Sphingomonas sp. URHD0057 [JIAU] 271895 271970 + Trp CCA [ENA] ¡û
>C141006087 CP006644 Alphaproteobacteria Sphingomonas sanxanigenens DSM 19645 = NX02 [CP006644] 318821 318896 + Trp CCA [Ensembl] ¡û
>W1910651522 LYMM01000062 Alphaproteobacteria Novosphingobium guangzhouense SA925 [LYMM] 244872 244797 - Trp CCA [ENA] ¡û
>W1911411157 NWUF01000015 Alphaproteobacteria Rhizorhabdus dicambivorans Ndbn-20m [NWUF] 23496 23571 + Trp CCA [ENA] ¡û
>W1911411910 NWVC01000002 Alphaproteobacteria Sphingomonas adhaesiva DSM 7418 [NWVC] 156215 156290 + Trp CCA [ENA] ¡û
>W1911411949 NWVD01000001 Alphaproteobacteria Sphingomonas ginsenosidimutans KACC 14949 [NWVD] 755158 755083 - Trp CCA [ENA] ¡û
>W1911719120 QQWX01000009 Alphaproteobacteria Sphingomonas sp. ABOLF S-NIH.Pt19_1214 [QQWX] 169296 169221 - Trp CCA [ENA] ¡û
>W1911823507 QZVQ01000004 Alphaproteobacteria Croceibacterium ferulae SX2RGS8 [QZVQ] 416889 416964 + Trp CCA [ENA] ¡û
>W1810090320 PGFU01000001 Alphaproteobacteria Sphingomonas carotinifaciens B093034 [PGFU] 244901 244976 + Trp CCA [ENA] ¡û
>W1810858406 QTJP01000001 Alphaproteobacteria Sphingomonas crusticola MIMD3 [QTJP] 1128600 1128525 - Trp CCA [ENA] ¡û
>W2010311512 CABWMU010000005 Alphaproteobacteria Sphingomonas sp. 8AM [CABWMU] 110354 110429 + Trp CCA [ENA] ¡û
>W2010370617 CAHJXD010000179 Alphaproteobacteria Sphingomonas bacterium [CAHJXD] 7983 7908 - Trp CCA [ENA] ¡û
>W2010438017 JAAAPO010000001 Alphaproteobacteria Novosphingobium sp. FSY-8 [JAAAPO] 124214 124289 + Trp CCA [ENA] ¡û
>W2010459402 JAAFZT010000050 Alphaproteobacteria Altererythrobacter sp. SALINAS58 [JAAFZT] 111504 111579 + Trp CCA [ENA] ¡û
>W2010534558 JAAOZC010000001 Alphaproteobacteria Sphingomonas vulcanisoli CECT 8804 [JAAOZC] 115343 115268 - Trp CCA [ENA] ¡û
>W2010567537 JAATJE010000001 Alphaproteobacteria Sphingomonas jejuensis DSM 27651 [JAATJE] 876271 876196 - Trp CCA [ENA] ¡û
>W2010585613 JABAID010000017 Alphaproteobacteria Novosphingobium sp. ERN07 [JABAID] 47335 47410 + Trp CCA [ENA] ¡û
>W2010586943 JABASZ010000032 Alphaproteobacteria Altererythrobacter sp. JL3514 [JABASZ] 209236 209161 - Trp CCA [ENA] ¡û
>W2010694876 JACHBT010000003 Alphaproteobacteria Sphingomonas endophytica AS3.13 [JACHBT] 238900 238975 + Trp CCA [ENA] ¡û
>W2010711933 JACHNZ010000009 Alphaproteobacteria Sphingosinicella soli DSM 17328 [JACHNZ] 84540 84465 - Trp CCA [ENA] ¡û
>W2010719150 JACHZH010000004 Alphaproteobacteria Sphingomonas sp. BK069 [JACHZH] 295909 295984 + Trp CCA [ENA] ¡û
>W2010724160 JACIDD010000001 Alphaproteobacteria Sphingomonas desiccabilis DSM 16792 [JACIDD] 139943 139868 - Trp CCA [ENA] ¡û
>W2010726412 JACIEY010000003 Alphaproteobacteria Sphingomonas carotinifaciens DSM 27347 [JACIEY] 354474 354549 + Trp CCA [ENA] ¡û
>W2010746110 JACLAW010000013 Alphaproteobacteria Novosphingobium flavum NBRC 111647 [JACLAW] 17430 17505 + Trp CCA [ENA] ¡û
>W2011137859 NWUF01000015 Alphaproteobacteria Rhizorhabdus dicambivorans Ndbn-20m [NWUF] 23496 23571 + Trp CCA [ENA] ¡û
>W2011138411 NWVC01000002 Alphaproteobacteria Sphingomonas adhaesiva DSM 7418 [NWVC] 156215 156290 + Trp CCA [ENA] ¡û
>W2011138450 NWVD01000001 Alphaproteobacteria Sphingomonas ginsenosidimutans KACC 14949 [NWVD] 755158 755083 - Trp CCA [ENA] ¡û
>W2011287110 QQWX01000009 Alphaproteobacteria Sphingomonas sp. ABOLF S-NIH.Pt19_1214 [QQWX] 169296 169221 - Trp CCA [ENA] ¡û
>W2011350497 QZVQ01000004 Alphaproteobacteria Croceibacterium ferulae SX2RGS8 [QZVQ] 416889 416964 + Trp CCA [ENA] ¡û
>W2011353772 RAPF01000005 Alphaproteobacteria Altererythrobacter sp. HN-Y73 [RAPF] 135895 135970 + Trp CCA [ENA] ¡û
>W2011549763 SDPT01000001 Alphaproteobacteria Sphingomonas desiccabilis CP1D [SDPT] 139975 139900 - Trp CCA [ENA] ¡û
>W2011623259 SLXN01000003 Alphaproteobacteria Sphingomonas sp. BK235 [SLXN] 91490 91415 - Trp CCA [ENA] ¡û
>W2011652646 SNZX01000001 Alphaproteobacteria Novosphingobium sp. GV013 [SNZX] 305434 305509 + Trp CCA [ENA] ¡û
>W2011653251 SOAI01000001 Alphaproteobacteria Novosphingobium sp. GV002 [SOAI] 305434 305509 + Trp CCA [ENA] ¡û
>W2011706757 SWKR01000002 Alphaproteobacteria Sphingomonas sp. L-1-4w-11 [SWKR] 66492 66417 - Trp CCA [ENA] ¡û
>W2012097938 VNIM01000043 Alphaproteobacteria Sphingomonas sp. R4DWN [VNIM] 27958 28033 + Trp CCA [ENA] ¡û
>W2012432526 WSUT01000005 Alphaproteobacteria Sphingomonas carotinifaciens DSM 27347 [WSUT] 3271891 3271966 + Trp CCA [ENA] ¡û
>W2012439043 WTYK01000006 Alphaproteobacteria Altererythrobacter soli MCCC 1K02066 [WTYK] 94304 94229 - Trp CCA [ENA] ¡û
>W2012468419 WVTD01000003 Alphaproteobacteria Novosphingobium sp. FGD1 [WVTD] 281076 281001 - Trp CCA [ENA] ¡û
>W2110196005 JABXWS010000046 Alphaproteobacteria Novosphingobium sp. HR1a [JABXWS] 17440 17365 - Trp CCA [ENA] ¡û
>W2110319252 JADHDT010000003 Alphaproteobacteria Sphingomonas sp. REN5 [JADHDT] 265730 265805 + Trp CCA [ENA] ¡û
>W2110372069 JADQDC010000014 Alphaproteobacteria Novosphingobium jiangmenense 1Y9A [JADQDC] 39174 39099 - Trp CCA [ENA] ¡û
>W2110446163 JAERSC010000002 Alphaproteobacteria Sphingomonas sp. REN5-1 [JAERSC] 392447 392522 + Trp CCA [ENA] ¡û
>W2110600282 JAHFVK010000002 Alphaproteobacteria Croceibacterium sp. LX-88 [JAHFVK] 443766 443691 - Trp CCA [ENA] ¡û
>W2110663342 JAHXZL010000007 Alphaproteobacteria Sphingomonas sp. RHCKR7 [JAHXZL] 216572 216497 - Trp CCA [ENA] ¡û
>W2110663437 JAHXZN010000002 Alphaproteobacteria Sphingomonas sp. RRHST34 [JAHXZN] 301152 301227 + Trp CCA [ENA] ¡û
>W2110663585 JAHXZS010000001 Alphaproteobacteria Aquisediminimonas sediminicola CH68-4 [JAHXZS] 1153969 1154044 + Trp CCA [ENA] ¡û
>W2110690833 JAIOKB010000003 Alphaproteobacteria Sphingomonas yunnanensis YIM 3 [JAIOKB] 77647 77572 - Trp CCA [ENA] ¡û
>C201182052 CP046535 Alphaproteobacteria Sphingomonas sp. LMO-1 [CP046535] 2499706 2499781 + Trp CCA - ¡û
>C211031784 CP021247 Alphaproteobacteria Novosphingobium sp. KA1 [CP021247, CP021248] 2527144 2527219 + Trp CCA - ¡û
>C211136848 CP060697 Alphaproteobacteria Sphingomonas sp. sand1-3 [CP060697] 2419319 2419244 - Trp CCA - ¡û
>C211137732 CP060718 Alphaproteobacteria Sphingomonas lutea KCTC 23642 [CP060718] 652729 652656 - Trp CCA - ¡û
>C211138786 CP060782 Alphaproteobacteria Sphingomonas sediminicola KACC 15039 [CP060782] 537695 537620 - Trp CCA - ¡û
>C211177384 CP063445 Alphaproteobacteria Novosphingobium sp. ES2-1 [CP063445] 2517518 2517443 - Trp CCA - ¡û
>C231259927 CP089301 Alphaproteobacteria Novosphingobium sp. Sx8-5 NBRC [CP089301] 2530326 2530251 - Trp CCA - ¡û
>C231441514 CP101740 Alphaproteobacteria Sphingomonas qomolangmaensis S5-59 [CP101740] 225331 225256 - Trp CCA - ¡û
>C231536472 CP110678 Alphaproteobacteria Sphingomonas sp. S1-29 [CP110678] 3213190 3213115 - Trp CCA - ¡û
>C231595902 CP117411 Alphaproteobacteria Sphingomonas naphthae KACC 18716 [CP117411] 258299 258224 - Trp CCA - ¡û
>C241105717 CP046120 Alphaproteobacteria Novosphingobium sp. Gsoil 351 [CP046120] 2017580 2017505 - Trp CCA - ¡û
>C241282393 CP128492 Alphaproteobacteria Novosphingobium resinovorum HR1a [CP128491, CP128492] 2462730 2462655 - Trp CCA - ¡û
>C241365929 CP141588 Alphaproteobacteria Sphingomonas sp. LY54 [CP141588] 855082 855157 + Trp CCA - ¡û
>W2310022537 BSFC01000044 Alphaproteobacteria Novosphingobium resinovorum VKM B-1172 [BSFC] 333977 334052 + Trp CCA [ENA] ¡û
>W1511352565 JROH01000015 Alphaproteobacteria Sphingomonas sp. 37zxx [JROH] 9538 9613 + Trp CCA [ENA] ¡û
>W1511356992 JRVC01000003 Alphaproteobacteria Novosphingobium subterraneum DSM 12447 [JRVC] 236146 236221 + Trp CCA [ENA] ¡û
>W1511398357 JTDN01000001 Alphaproteobacteria Croceibacterium mercuriale Coronado [JTDN] 1344358 1344283 - Trp CCA [ENA] ¡û
>W1511581098 LARW01000052 Alphaproteobacteria Sphingomonas sp. SRS2 [LARW] 41420 41495 + Trp CCA [ENA] ¡û
>W11167375 AFMP01000065 Alphaproteobacteria Sphingomonas sp. KC8 [AFMP] 3688 3613 - Trp CCA [ENA] ¡û
>W121086731 AKKE01000095 Alphaproteobacteria Novosphingobium sp. AP12 [AKKE] 29572 29497 - Trp CCA [ENA] ¡û
>W121119237 ALVC01000203 Alphaproteobacteria Sphingomonas sp. LH128 [ALVC] 9011 8936 - Trp CCA [ENA] ¡û
>W1610074536 BCWT01000137 Alphaproteobacteria Sphingomonas adhaesiva NBRC 15099 [BCWT] 2171 2246 + Trp CCA [ENA] ¡û
>W1610077024 BCZF01000003 Alphaproteobacteria Novosphingobium subterraneum NBRC 16086 [BCZF] 165040 165115 + Trp CCA [ENA] ¡û
>W1610590984 LDRW01000016 Alphaproteobacteria Novosphingobium barchaimii [LDRW] 73076 73001 - Trp CCA [ENA] ¡û
>W1610592875 LDTB01000064 Alphaproteobacteria Sphingomonas endophytica [LDTB] 53992 54067 + Trp CCA [ENA] ¡û
>W1610724778 LMEJ01000011 Alphaproteobacteria Sphingomonas sp. Root1294 [LMEJ] 198178 198103 - Trp CCA [ENA] ¡û
>W1610726251 LMFM01000001 Alphaproteobacteria Sphingomonas sp. Root50 [LMFM] 198135 198060 - Trp CCA [ENA] ¡û
>W1610728586 LMHH01000003 Alphaproteobacteria Altererythrobacter sp. Root672 [LMHH] 463536 463611 + Trp CCA [ENA] ¡û
>W1610729651 LMID01000015 Alphaproteobacteria Sphingomonas sp. Root720 [LMID] 329620 329695 + Trp CCA [ENA] ¡û
>W1610913752 LSJO01000019 Alphaproteobacteria Sphingomonas sp. CCH9-F2 [LSJO] 9105 9030 - Trp CCA [ENA] ¡û
>W1710071654 BCWT01000137 Alphaproteobacteria Sphingomonas adhaesiva NBRC 15099 [BCWT] 2171 2246 + Trp CCA [ENA] ¡û
>W1710074713 BCZF01000003 Alphaproteobacteria Novosphingobium subterraneum NBRC 16086 [BCZF] 165040 165115 + Trp CCA [ENA] ¡û
>W1710514912 FNBI01000001 Alphaproteobacteria Sphingomonas carotinifaciens S7-754 [FNBI] 354720 354795 + Trp CCA [ENA] ¡û
>W1710606009 FWXL01000012 Alphaproteobacteria Novosphingobium sp. B1 [FWXL] 45103 45028 - Trp CCA [ENA] ¡û
>W1710710264 LDRW01000016 Alphaproteobacteria Novosphingobium barchaimii [LDRW] 73076 73001 - Trp CCA [ENA] ¡û
>W1710712155 LDTB01000064 Alphaproteobacteria Sphingomonas endophytica [LDTB] 53992 54067 + Trp CCA [ENA] ¡û
>W1710743483 LGVA01000039 Alphaproteobacteria Sphingomonas sp. Ndbn-20 [LGVA] 23419 23494 + Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK