tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.305545 (69 seq.)
>W1710913386 LNSK01000004 Alphaproteobacteria Sphingopyxis sp. A083 [LNSK] 285456 285380 - Ile GAT [ENA] ¡û
>W1711127870 LURB01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 1991 1915 - Ile GAT [ENA] ¡û
>W131100408 AOUN01000003 Alphaproteobacteria Sphingopyxis sp. MC1 [AOUN] 387161 387085 - Ile GAT [ENA] ¡û
>W131160241 AQWK01000037 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AQWK] 1844 1920 + Ile GAT [ENA] ¡û
>WENV181170481 OEIV010050318 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 354 430 + Ile GAT [ENA] ¡û
>WENV181402691 OFTY01020086 [OFTY] sludge metagenome; sludge 375 451 + Ile GAT [ENA] ¡û
>WENV181836427 OGVJ01006835 [OGVJ] freshwater metagenome; freshwater 966 890 - Ile GAT [ENA] ¡û
>WENV181840046 OGVO01034727 [OGVO] freshwater metagenome; freshwater 90 166 + Ile GAT [ENA] ¡û
>WENV181840249 OGVO01059500 [OGVO] freshwater metagenome; freshwater 241 317 + Ile GAT [ENA] ¡û
>WENV181850940 OGWE01003332 [OGWE] freshwater metagenome; freshwater 172 96 - Ile GAT [ENA] ¡û
>WENV183726306 PJQF01156733 [PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm 189 265 + Ile GAT [ENA] ¡û
>WENV170009823 APMI01003480 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 357 433 + Ile GAT [ENA] ¡û
>WENV170728081 LULE01008348 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 2093 2017 - Ile GAT [ENA] ¡û
>WENV170729551 LULF01049976 [LULF] marine metagenome; Red Sea water column Station 169 - depth 500m 183 107 - Ile GAT [ENA] ¡û
>WENV170729981 LULG01005575 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 1375 1299 - Ile GAT [ENA] ¡û
>WENV170733155 LULJ01006643 [LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m 1596 1520 - Ile GAT [ENA] ¡û
>WENV170734699 LULK01014686 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 969 893 - Ile GAT [ENA] ¡û
>WENV170735893 LULL01020028 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 1044 970 - Ile GAT [ENA] ¡û
>WENV170736470 LULM01004588 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 1057 981 - Ile GAT [ENA] ¡û
>WENV170737866 LULO01005800 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 1579 1503 - Ile GAT [ENA] ¡û
>WENV170738492 LULP01000485 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 6519 6595 + Ile GAT [ENA] ¡û
>WENV170739602 LULQ01004838 [LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m 227 303 + Ile GAT [ENA] ¡û
>WENV170742748 LULV01000423 [LULV] marine metagenome; Red Sea water column Station 108 - depth 25m 1991 1915 - Ile GAT [ENA] ¡û
>WENV170743826 LULW01004941 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 397 473 + Ile GAT [ENA] ¡û
>WENV170759251 LUMS01007979 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 335 411 + Ile GAT [ENA] ¡û
>WENV170759961 LUMT01001439 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 6341 6417 + Ile GAT [ENA] ¡û
>WENV170761574 LUMV01001704 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 2841 2765 - Ile GAT [ENA] ¡û
>WENV170770581 LXNH01113355 [LXNH] seawater metagenome; marine seawater 116 192 + Ile GAT [ENA] ¡û
>C191170962 CP039695 Alphaproteobacteria Novosphingobium sp. EMRT-2 [CP039695] 2834798 2834874 + Ile GAT - ¡û
>C191170986 CP039695 Alphaproteobacteria Novosphingobium sp. EMRT-2 [CP039695] 985068 984992 - Ile GAT - ¡û
>W1910231980 FPEH01000035 Alphaproteobacteria Novosphingobium sp. NDB2Meth1 [FPEH] 2001 2077 + Ile GAT [ENA] ¡û
>W1910501748 FYAT01000001 Alphaproteobacteria Sphingopyxis sp. P1IMeth2 [FYAT] 900182 900258 + Ile GAT [ENA] ¡û
>W1910822164 MWMO01000013 Alphaproteobacteria Novosphingobium sp. PC22D [MWMO] 54400 54476 + Ile GAT [ENA] ¡û
>W1911411589 NWUR01000014 Alphaproteobacteria Sphingopyxis ummariensis DSM 24316 [NWUR] 4155 4079 - Ile GAT [ENA] ¡û
>W1810121236 PHUF01000004 Alphaproteobacteria Novosphingobium kunmingense CGMCC 1.12274 [PHUF] 247357 247281 - Ile GAT [ENA] ¡û
>W1810195691 PKRT01000001 Alphaproteobacteria Novosphingobium sp. TH158 [PKRT] 1326789 1326713 - Ile GAT [ENA] ¡û
>W1810597618 QGHL01000008 Alphaproteobacteria Novosphingobium meiothermophilum SYSU G00007 [QGHL] 429505 429581 + Ile GAT [ENA] ¡û
>W1810597621 QGHL01000008 Alphaproteobacteria Novosphingobium meiothermophilum SYSU G00007 [QGHL] 435406 435482 + Ile GAT [ENA] ¡û
>W1810789415 QRGP01000002 Alphaproteobacteria Sphingorhabdus pulchriflava GY_G [QRGP] 387118 387194 + Ile GAT [ENA] ¡û
>W2010385523 FPEH01000035 Alphaproteobacteria Novosphingobium sp. NDB2Meth1 [FPEH] 2001 2077 + Ile GAT [ENA] ¡û
>W2010421480 FYAT01000001 Alphaproteobacteria Sphingopyxis sp. P1IMeth2 [FYAT] 900182 900258 + Ile GAT [ENA] ¡û
>W2010438052 JAAAPO010000004 Alphaproteobacteria Novosphingobium sp. FSY-8 [JAAAPO] 463641 463717 + Ile GAT [ENA] ¡û
>W2010746022 JACLAU010000078 Alphaproteobacteria Novosphingobium flavum 4Y4 [JACLAU] 3328 3252 - Ile GAT [ENA] ¡û
>W2010746068 JACLAV010000075 Alphaproteobacteria Novosphingobium flavum 4Y9 [JACLAV] 1664 1740 + Ile GAT [ENA] ¡û
>W2010746094 JACLAW010000007 Alphaproteobacteria Novosphingobium flavum NBRC 111647 [JACLAW] 248963 249039 + Ile GAT [ENA] ¡û
>W2010746161 JACLAX010000039 Alphaproteobacteria Novosphingobium piscinae KCTC 42194 [JACLAX] 1965 2041 + Ile GAT [ENA] ¡û
>W2010918586 MWMO01000013 Alphaproteobacteria Novosphingobium sp. PC22D [MWMO] 54400 54476 + Ile GAT [ENA] ¡û
>W2011138036 NWUR01000014 Alphaproteobacteria Sphingopyxis ummariensis DSM 24316 [NWUR] 4155 4079 - Ile GAT [ENA] ¡û
>W2011479730 RQSI01000100 Alphaproteobacteria Novosphingobium sp. LASN5T [RQSI] 3504 3428 - Ile GAT [ENA] ¡û
>W2011652676 SNZX01000002 Alphaproteobacteria Novosphingobium sp. GV013 [SNZX] 348034 347958 - Ile GAT [ENA] ¡û
>W2011652682 SNZX01000002 Alphaproteobacteria Novosphingobium sp. GV013 [SNZX] 67363 67287 - Ile GAT [ENA] ¡û
>W2011653281 SOAI01000002 Alphaproteobacteria Novosphingobium sp. GV002 [SOAI] 348034 347958 - Ile GAT [ENA] ¡û
>W2011653287 SOAI01000002 Alphaproteobacteria Novosphingobium sp. GV002 [SOAI] 67363 67287 - Ile GAT [ENA] ¡û
>C201110589 CP042345 Alphaproteobacteria Novosphingobium ginsenosidimutans FW-6 [CP042345] 1915377 1915453 + Ile GAT - ¡û
>C211082728 CP050249 Alphaproteobacteria Sphingopyxis terrae subsp. terrae YC-JH3 [CP050249] 3618912 3618836 - Ile GAT - ¡û
>W1510019729 BBXA01000007 Alphaproteobacteria Novosphingobium sp. MD-1 [BBXA] 3504 3428 - Ile GAT [ENA] ¡û
>W1510019732 BBXA01000019 Alphaproteobacteria Novosphingobium sp. MD-1 [BBXA] 85857 85781 - Ile GAT [ENA] ¡û
>W1510019754 BBXA01000030 Alphaproteobacteria Novosphingobium sp. MD-1 [BBXA] 17436 17512 + Ile GAT [ENA] ¡û
>W2110778328 VUOG01000001 Alphaproteobacteria Novosphingobium sp. NBM11 [VUOG] 3543593 3543669 + Ile GAT [ENA] ¡û
>W2110778346 VUOG01000001 Alphaproteobacteria Novosphingobium sp. NBM11 [VUOG] 1571047 1570971 - Ile GAT [ENA] ¡û
>C241328179 CP136575 Alphaproteobacteria Sphingobium sp. [CP136575] 212579 212503 - Ile GAT - ¡û
>W11151088 AEWJ01000057 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AEWJ] 3608 3532 - Ile GAT [ENA] ¡û
>C161055599 CP013342 Alphaproteobacteria Sphingopyxis terrae subsp. terrae NBRC 15098 203-1 [CP013342] 1744609 1744685 + Ile GAT [Ensembl] ¡û
>WENV006122 AACY020168737 Marine microbial communities from Global Ocean Sampling (GOS) 1477 1553 + Ile GAT [ENA]
>W1610077682 BCZQ01000015 Alphaproteobacteria Sphingopyxis terrae NBRC 15098 [BCZQ] 74829 74905 + Ile GAT [ENA] ¡û
>W1610771745 LNSK01000004 Alphaproteobacteria Sphingopyxis sp. A083 [LNSK] 285456 285380 - Ile GAT [ENA] ¡û
>W1610938984 LURB01000004 Alphaproteobacteria Sphingopyxis sp. REDSEA-S23_B6 [LURB] 1991 1915 - Ile GAT [ENA] ¡û
>W1710075320 BCZQ01000015 Alphaproteobacteria Sphingopyxis terrae NBRC 15098 [BCZQ] 74829 74905 + Ile GAT [ENA] ¡û
>W1710609455 FXWL01000004 Alphaproteobacteria Sphingopyxis terrae ummariensis [FXWL] 206426 206502 + Ile GAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK