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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.307350 (6 seq.)
>W1711022681
LRAA01000230
Bacillota
Bacillus cereus [LRAA]
8843
8917
+
Met
CAT
[ENA]
¡û
>W1910646239
LWLX01000394
Bacillota
Bacillus cereus P4-1-5 [LWLX]
10557
10483
-
Met
CAT
[ENA]
¡û
>W1911349841
NUWJ01000287
Bacillota
Bacillus cereus AFS083741 [NUWJ]
5080
5154
+
Met
CAT
[ENA]
¡û
>W1911353836
NUYO01000036
Bacillota
Bacillus cereus AFS076904 [NUYO]
244
318
+
Met
CAT
[ENA]
¡û
>W1510741548
CYHR01000342
Bacillota
Bacillus subtilis [CYHR]
1745
1672
-
Met
CAT
[ENA]
¡û
>W1610870926
LRAA01000230
Bacillota
Bacillus cereus [LRAA]
8843
8917
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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