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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.308395 (235 seq.)
>W1710860813
LMDE01000009
Actinomycetota
Nocardioides sp. Root122 [LMDE]
297744
297820
+
Met
CAT
[ENA]
¡û
>W1710860985
LMDH01000001
Actinomycetota
Aeromicrobium sp. Root344 [LMDH]
759319
759243
-
Met
CAT
[ENA]
¡û
>W1710862892
LMER01000015
Actinomycetota
Angustibacter sp. Root456 [LMER]
193561
193487
-
Met
CAT
[ENA]
¡û
>W1710865642
LMGV01000007
Actinomycetota
Nocardioides sp. Root614 [LMGV]
46797
46871
+
Met
CAT
[ENA]
¡û
>W1710866337
LMHJ01000003
Actinomycetota
Nocardioides sp. Root682 [LMHJ]
46851
46925
+
Met
CAT
[ENA]
¡û
>W1710867117
LMIA01000001
Actinomycetota
Nocardioides sp. Root190 [LMIA]
322426
322352
-
Met
CAT
[ENA]
¡û
>W1710867833
LMIP01000011
Actinomycetota
Nocardioides sp. Root79 [LMIP]
160690
160616
-
Met
CAT
[ENA]
¡û
>W1710867991
LMIS01000001
Actinomycetota
Aeromicrobium sp. Root236 [LMIS]
1702825
1702749
-
Met
CAT
[ENA]
¡û
>W1710868021
LMIT01000010
Actinomycetota
Nocardioides sp. Root240 [LMIT]
252532
252458
-
Met
CAT
[ENA]
¡û
>W1710880654
LMSM01000006
Actinomycetota
Nocardioides sp. Soil774 [LMSM]
765940
766016
+
Met
CAT
[ENA]
¡û
>W1710880701
LMSN01000015
Actinomycetota
Nocardioides sp. Soil777 [LMSN]
228191
228267
+
Met
CAT
[ENA]
¡û
>W1710881066
LMSU01000001
Actinomycetota
Nocardioides sp. Soil805 [LMSU]
1378229
1378153
-
Met
CAT
[ENA]
¡û
>W1711126688
LUPF01000006
Actinomycetota
Nocardioides sp. REDSEA-S22_B2 [LUPF]
122731
122655
-
Met
CAT
[ENA]
¡û
>W1711126779
LUPH01000121
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
7867
7791
-
Met
CAT
[ENA]
¡û
>W1711126816
LUPI01000031
Actinomycetota
Nocardioides sp. REDSEA-S30_B4 [LUPI]
75814
75738
-
Met
CAT
[ENA]
¡û
>W1711126840
LUPJ01000029
Actinomycetota
Nocardioides sp. REDSEA-S31_B4 [LUPJ]
2800
2724
-
Met
CAT
[ENA]
¡û
>W1711126909
LUPK01000054
Actinomycetota
Nocardioides sp. REDSEA-S33_B3 [LUPK]
41477
41553
+
Met
CAT
[ENA]
¡û
>W1711126934
LUPL01000032
Actinomycetota
Nocardioides sp. REDSEA-S34_B5 [LUPL]
5192
5116
-
Met
CAT
[ENA]
¡û
>W1711127032
LUPO01000001
Actinomycetota
Nocardioides sp. REDSEA-S39_B2 [LUPO]
123549
123473
-
Met
CAT
[ENA]
¡û
>W1711127082
LUPP01000026
Actinomycetota
Nocardioides sp. REDSEA-S40_B4 [LUPP]
41311
41387
+
Met
CAT
[ENA]
¡û
>W1711127112
LUPQ01000003
Actinomycetota
Nocardioides sp. REDSEA-S43_B3 [LUPQ]
7930
7854
-
Met
CAT
[ENA]
¡û
>W1711430471
MIJB01000033
Actinomycetota
Aeromicrobium sp. PE09-221 [MIJB]
5965
6041
+
Met
CAT
[ENA]
¡û
>W1712084123
NHQT01000003
Actinomycetota
Nocardioides sp. XL1 [NHQT]
206111
206037
-
Met
CAT
[ENA]
¡û
>W131190776
ASEP01000020
Actinomycetota
Nocardioides sp. CF8 [ASEP]
141785
141861
+
Met
CAT
[ENA]
¡û
>W131226723
AUEP01000004
Actinomycetota
Marmoricola sp. URHB0036 [AUEP]
351624
351550
-
Met
CAT
[ENA]
¡û
>C015187
CP000509
Actinomycetota
Nocardioides sp. JS614 [CP000509]
709389
709462
+
Met
CAT
[Ensembl]
¡û
>WENV180000079
CZKB01000017
[CZKB] metagenome; liquid mineral medium
475045
474969
-
Met
CAT
[ENA]
¡û
>WENV180019292
FTBU01000174
[FTBU] metagenome; soil
6106
6180
+
Met
CAT
[ENA]
¡û
>WENV180039559
LLBY010093203
[LLBY] soil metagenome; soil from tomato rhizosphere
204
130
-
Met
CAT
[ENA]
¡û
>WENV180291078
OBIV01003873
[OBIV] soil metagenome; Clay
101
175
+
Met
CAT
[ENA]
¡û
>WENV180298242
OBJA01230217
[OBJA] soil metagenome; sediment, water from around vicinity
127
53
-
Met
CAT
[ENA]
¡û
>WENV180327745
OBKT01457221
[OBKT] soil metagenome; soil
94
168
+
Met
CAT
[ENA]
¡û
>WENV180331436
OBLA01048383
[OBLA] soil metagenome; Alaskan Permafrost
38
114
+
Met
CAT
[ENA]
¡û
>WENV180344558
OBLL01040114
[OBLL] soil metagenome; soil
199
125
-
Met
CAT
[ENA]
¡û
>WENV180593662
OCOX01131787
[OCOX] marine metagenome; ENVO:00002010
64
140
+
Met
CAT
[ENA]
¡û
>WENV180691423
OCZS010118466
[OCZS] soil metagenome; soil
91
167
+
Met
CAT
[ENA]
¡û
>WENV181192651
OEPS010876174
[OEPS] soil metagenome; soil
152
78
-
Met
CAT
[ENA]
¡û
>WENV181308155
OFIS01000348
[OFIS] sludge metagenome; sludge
29220
29294
+
Met
CAT
[ENA]
¡û
>WENV181401711
OFTX01003541
[OFTX] sludge metagenome; sludge
2587
2513
-
Met
CAT
[ENA]
¡û
>W141241352
CAHG01000004
Actinomycetota
Aeromicrobium massiliense JC14 [CAHG]
70637
70561
-
Met
CAT
[ENA]
¡û
>W141277533
JAER01000006
Actinomycetota
Nocardioides sp. J54 [JAER]
112367
112293
-
Met
CAT
[ENA]
¡û
>WENV170229040
CEQG01068392
[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
592
668
+
Met
CAT
[ENA]
¡û
>WENV170551590
CXWJ01013875
[CXWJ] wastewater metagenome; activated sludge
622
546
-
Met
CAT
[ENA]
¡û
>WENV170551960
CXWJ01032517
[CXWJ] wastewater metagenome; activated sludge
636
560
-
Met
CAT
[ENA]
¡û
>WENV170575272
FLYN01052968
[FLYN] hot springs metagenome; Sediment
381
457
+
Met
CAT
[ENA]
¡û
>WENV170727506
LULE01000267
[LULE] marine metagenome; Red Sea water column Station 192 - depth 10m
1539
1463
-
Met
CAT
[ENA]
¡û
>WENV170732064
LULI01012735
[LULI] marine metagenome; Red Sea water column Station 169 - depth 50m
1297
1221
-
Met
CAT
[ENA]
¡û
>WENV170734061
LULK01001045
[LULK] marine metagenome; Red Sea water column Station 169 - depth 10m
1139
1063
-
Met
CAT
[ENA]
¡û
>WENV170735091
LULL01000005
[LULL] marine metagenome; Red Sea water column Station 149 - depth 500m
41477
41553
+
Met
CAT
[ENA]
¡û
>WENV170737018
LULN01000965
[LULN] marine metagenome; Red Sea water column Station 149 - depth 100m
2800
2724
-
Met
CAT
[ENA]
¡û
>WENV170737422
LULO01000064
[LULO] marine metagenome; Red Sea water column Station 149 - depth 50m
75814
75738
-
Met
CAT
[ENA]
¡û
>WENV170739341
LULQ01000327
[LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m
7867
7791
-
Met
CAT
[ENA]
¡û
>WENV170740662
LULR01026477
[LULR] marine metagenome; Red Sea water column Station 108 - depth 500m
444
368
-
Met
CAT
[ENA]
¡û
>WENV170746413
LULZ01035832
[LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m
778
702
-
Met
CAT
[ENA]
¡û
>WENV170760756
LUMU01000053
[LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m
7930
7854
-
Met
CAT
[ENA]
¡û
>WENV170761944
LUMW01000155
[LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m
7922
7846
-
Met
CAT
[ENA]
¡û
>WENV170961805
MLJW01001511
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
1126
1052
-
Met
CAT
[ENA]
¡û
>C191104181
CP033324
Actinomycetota
Nocardioides pantholopis 603 [CP033324]
474167
474241
+
Met
CAT
-
¡û
>C191158866
CP038267
Actinomycetota
Nocardioides euryhalodurans MMS17-SY117 [CP038267]
1946339
1946265
-
Met
CAT
-
¡û
>C191159478
CP038436
Actinomycetota
Nocardioides seonyuensis MMS17-SY207-3 [CP038436]
990750
990675
-
Met
CAT
-
¡û
>C191183916
CP040899
Actinomycetota
Georgenia wutianyii Z294 [CP040899]
3045334
3045260
-
Met
CAT
-
¡û
>W141564530
JIAV01000020
Actinomycetota
Nocardioides sp. URHA0032 [JIAV]
49859
49933
+
Met
CAT
[ENA]
¡û
>W141815863
JQJL01000015
Actinomycetota
Nocardioides sp. UNC345MFTsu5.1 [JQJL]
189895
189969
+
Met
CAT
[ENA]
¡û
>W09103260
AAJB01000018
Actinomycetota
Nocardioides sp. JS614 [AAJB]
43528
43602
+
Met
CAT
[ENA]
¡û
>W1910141245
BIFF01000002
Actinomycetota
Nocardioides sp. LS1 [BIFF]
657802
657728
-
Met
CAT
[ENA]
¡û
>W1911672119
QGDD01000007
Actinomycetota
Nocardioides sp. CCTCC AB 2018079 [QGDD]
174476
174550
+
Met
CAT
[ENA]
¡û
>W1911693717
QLVF01000617
Actinomycetota
Aeromicrobium sp. CPCC 204604 [QLVF]
247
323
+
Met
CAT
[ENA]
¡û
>W1911768135
QXGH01000010
Actinomycetota
Nocardioides immobilis CCTCC AB 2017083 [QXGH]
113371
113445
+
Met
CAT
[ENA]
¡û
>W1810089841
PGEZ01000001
Actinomycetota
Mumia flava DSM 27763 [PGEZ]
2682356
2682430
+
Met
CAT
[ENA]
¡û
>W1810157287
PJBV01000011
Actinomycetota
Nocardioides alpinus DSM 23325 [PJBV]
504465
504389
-
Met
CAT
[ENA]
¡û
>W1810427500
PYXZ01000001
Actinomycetota
Nocardioides currus IB-3 [PYXZ]
487050
486975
-
Met
CAT
[ENA]
¡û
>W1810462602
PZYX01000001
Actinomycetota
Nocardioides allogilvus KCTC 49020 [PZYX]
262769
262844
+
Met
CAT
[ENA]
¡û
>W1810462648
PZYY01000001
Actinomycetota
Nocardioides terrigena KCTC 19217 [PZYY]
383983
384059
+
Met
CAT
[ENA]
¡û
>W1810462695
PZYZ01000001
Actinomycetota
Nocardioides sediminis KCTC 19271 [PZYZ]
30426
30502
+
Met
CAT
[ENA]
¡û
>W1810504027
QBKO01000027
Actinomycetota
Nocardioides sp. CF167 [QBKO]
7840
7766
-
Met
CAT
[ENA]
¡û
>W1810539921
QDGZ01000009
Actinomycetota
Nocardioides gansuensis WSJ-1 [QDGZ]
124103
124027
-
Met
CAT
[ENA]
¡û
>W1810577899
QEOO01000050
Actinomycetota
Nocardioides speluncae YIM ART13 [QEOO]
12567
12493
-
Met
CAT
[ENA]
¡û
>W1810675445
QKKY01000617
Actinomycetota
Aeromicrobium sp. IBM16_104W [QKKY]
247
323
+
Met
CAT
[ENA]
¡û
>W1810676433
QKLZ01000006
Actinomycetota
Georgenia satyanarayanai CGMCC 1.10826 [QKLZ]
127791
127865
+
Met
CAT
[ENA]
¡û
>W2010083052
BIFF01000002
Actinomycetota
Nocardioides sp. LS1 [BIFF]
657802
657728
-
Met
CAT
[ENA]
¡û
>W2010104785
BJYY01000001
Actinomycetota
Cellulomonas aerilata NBRC 106308 [BJYY]
657081
657155
+
Met
CAT
[ENA]
¡û
>W2010106138
BKAE01000007
Actinomycetota
Nocardioides szechwanensis NBRC 108562 [BKAE]
119752
119826
+
Met
CAT
[ENA]
¡û
>W2010268872
CABKRP020000001
Actinomycetota
Aeromicrobium massiliense [CABKRP]
285859
285784
-
Met
CAT
[ENA]
¡û
>W2010275263
CABKVZ020000009
Actinomycetota
Cellulomonas timonensis [CABKVZ]
126929
127005
+
Met
CAT
[ENA]
¡û
>W2010309718
CABWLN010000041
Actinomycetota
Nocardioides sp. AX2bis [CABWLN]
112733
112657
-
Met
CAT
[ENA]
¡û
>W2010468974
JAAGOB010000002
Actinomycetota
Phytoactinopolyspora alkaliphila CGMCC 4.7225 [JAAGOB]
212690
212615
-
Met
CAT
[ENA]
¡û
>W2010472447
JAAHFJ010000004
Actinomycetota
Mumia sp. ZJ1417 [JAAHFJ]
522346
522420
+
Met
CAT
[ENA]
¡û
>W2010472494
JAAHFK010000003
Actinomycetota
Mumia sp. ZJ430 [JAAHFK]
317755
317681
-
Met
CAT
[ENA]
¡û
>W2010521341
JAANMS010000055
Actinomycetota
Nocardioides sp. IC4_145 [JAANMS]
5820
5746
-
Met
CAT
[ENA]
¡û
>W2010528845
JAAOEN010000023
Actinomycetota
Phytoactinopolyspora sp. HAJB-30 [JAAOEN]
61208
61283
+
Met
CAT
[ENA]
¡û
>W2010603282
JABJQY010000002
Actinomycetota
Nocardioides sp. zg-1308 [JABJQY]
1793471
1793547
+
Met
CAT
[ENA]
¡û
>W2010603319
JABJQZ010000001
Actinomycetota
Nocardioides sp. zg-1230 [JABJQZ]
1609344
1609420
+
Met
CAT
[ENA]
¡û
>W2010603395
JABJRA010000012
Actinomycetota
Nocardioides sp. zg-DK7169 [JABJRA]
50764
50688
-
Met
CAT
[ENA]
¡û
>W2010668198
JACBZI010000001
Actinomycetota
Nocardioides marinus DSM 18248 [JACBZI]
294213
294289
+
Met
CAT
[ENA]
¡û
>W2010668390
JACBZM010000001
Actinomycetota
Nocardioides aromaticivorans DSM 15131 [JACBZM]
2847820
2847894
+
Met
CAT
[ENA]
¡û
>W2010669145
JACCAC010000001
Actinomycetota
Nocardioides perillae DSM 24552 [JACCAC]
20348
20272
-
Met
CAT
[ENA]
¡û
>W2010669170
JACCAD010000001
Actinomycetota
Nocardioides lianchengensis CGMCC 4.6858 [JACCAD]
3015439
3015365
-
Met
CAT
[ENA]
¡û
>W2010670801
JACCBG010000001
Actinomycetota
Nocardioides panaciterrulae DSM 21350 [JACCBG]
3674574
3674500
-
Met
CAT
[ENA]
¡û
>W2010671584
JACCBW010000002
Actinomycetota
Nocardioides cavernae AT2.17 [JACCBW]
610171
610247
+
Met
CAT
[ENA]
¡û
>W2010674816
JACCFP010000001
Actinomycetota
Nocardioides thalensis DSM 103833 [JACCFP]
423243
423317
+
Met
CAT
[ENA]
¡û
>W2010681174
JACEFC010000014
Actinomycetota
Nocardioides sp. 1.0914 [JACEFC]
41293
41367
+
Met
CAT
[ENA]
¡û
>W2010681846
JACEHF010000198
Actinomycetota
Nocardioides pelophilus CGMCC 4.7388 [JACEHF]
6009
5935
-
Met
CAT
[ENA]
¡û
>W2010692043
JACGXA010000001
Actinomycetota
Nocardioides ginsengisegetis DSM 21349 [JACGXA]
3510757
3510683
-
Met
CAT
[ENA]
¡û
>W2011250509
QGDD01000007
Actinomycetota
Nocardioides sp. CCTCC AB 2018079 [QGDD]
174476
174550
+
Met
CAT
[ENA]
¡û
>W2011274025
QLVF01000617
Actinomycetota
Aeromicrobium sp. CPCC 204604 [QLVF]
247
323
+
Met
CAT
[ENA]
¡û
>W2011325730
QXGH01000010
Actinomycetota
Nocardioides immobilis CCTCC AB 2017083 [QXGH]
113371
113445
+
Met
CAT
[ENA]
¡û
>W2011375467
RBLE01000003
Actinomycetota
Nocardioides sp. CF479 [RBLE]
248226
248150
-
Met
CAT
[ENA]
¡û
>W2011408385
RDBF01000003
Actinomycetota
Aeromicrobium sp. 9W16Y-2 [RDBF]
51434
51510
+
Met
CAT
[ENA]
¡û
>W2011417130
RHDV01000001
Actinomycetota
Nocardioides sp. X2025 [RHDV]
252798
252724
-
Met
CAT
[ENA]
¡û
>W2011477746
RQJX01000001
Actinomycetota
Aeromicrobium camelliae YS17T [RQJX]
49026
49102
+
Met
CAT
[ENA]
¡û
>W2011546755
SDKM01000040
Actinomycetota
Nocardioides sp. 130 [SDKM]
10113
10187
+
Met
CAT
[ENA]
¡û
>W2011549714
SDPQ02000002
Actinomycetota
Aeromicrobium ginsengisoli JCM 14732 [SDPQ]
205072
205147
+
Met
CAT
[ENA]
¡û
>W2011549788
SDPU01000007
Actinomycetota
Nocardioides iriomotensis NBRC 105384 [SDPU]
10253
10177
-
Met
CAT
[ENA]
¡û
>W2011553291
SDWS01000010
Actinomycetota
Nocardioides glacieisoli HLT3-15 [SDWS]
165793
165717
-
Met
CAT
[ENA]
¡û
>W2011553329
SDWT01000001
Actinomycetota
Nocardioides oleivorans CGMCC 4.6882 [SDWT]
731994
731918
-
Met
CAT
[ENA]
¡û
>W2011553375
SDWU01000018
Actinomycetota
Nocardioides ganghwensis CGMCC 4.6875 [SDWU]
90341
90417
+
Met
CAT
[ENA]
¡û
>W2011553395
SDWV01000002
Actinomycetota
Nocardioides sp. HLT2-9 [SDWV]
92224
92150
-
Met
CAT
[ENA]
¡û
>W2011553464
SDWW01000022
Actinomycetota
Cellulomonas sp. HLT2-17 [SDWW]
61198
61122
-
Met
CAT
[ENA]
¡û
>W2011615649
SJXM01000001
Actinomycetota
Aeromicrobium sp. IC_218 [SJXM]
417789
417864
+
Met
CAT
[ENA]
¡û
>W2011675915
SPUI01000003
Actinomycetota
Nocardioides sp. 503 [SPUI]
622203
622129
-
Met
CAT
[ENA]
¡û
>W2011680327
SRRO01000001
Actinomycetota
Nocardioides sp. MMS17-SY213 [SRRO]
123469
123393
-
Met
CAT
[ENA]
¡û
>W2011693552
SSXI01000006
Actinomycetota
Nocardioides bacterium 21Sc5-5 [SSXI]
7671
7745
+
Met
CAT
[ENA]
¡û
>W2011694973
STGL01000008
Actinomycetota
Nocardioides sp. GY 10127 [STGL]
83567
83491
-
Met
CAT
[ENA]
¡û
>W2011804945
UETB01000006
Actinomycetota
Georgenia satyanarayanai CGMCC 1.10826 [UETB]
127791
127865
+
Met
CAT
[ENA]
¡û
>W2011982164
VDFQ02000004
Actinomycetota
Mumia sp. Z350 [VDFQ]
146267
146341
+
Met
CAT
[ENA]
¡û
>W2011982212
VDFR01000069
Actinomycetota
Mumia sp. Z527 [VDFR]
70019
70093
+
Met
CAT
[ENA]
¡û
>W2011982253
VDFR01000257
Actinomycetota
Mumia sp. Z527 [VDFR]
26777
26703
-
Met
CAT
[ENA]
¡û
>W2011982269
VDFS01000024
Actinomycetota
Georgenia sp. 311 [VDFS]
45701
45627
-
Met
CAT
[ENA]
¡û
>W2011985500
VDMR01000001
Actinomycetota
Nocardioides litoris DSM 103718 [VDMR]
567917
567993
+
Met
CAT
[ENA]
¡û
>W2011993088
VDUX01000005
Actinomycetota
Aeromicrobium sp. CC-CFT486 [VDUX]
157550
157626
+
Met
CAT
[ENA]
¡û
>W2012080344
VLJQ01000064
Actinomycetota
Nocardioides sp. J9 [VLJQ]
11418
11344
-
Met
CAT
[ENA]
¡û
>W2012084291
VLNT01000005
Actinomycetota
Aeromicrobium sp. Co35 [VLNT]
143095
143019
-
Met
CAT
[ENA]
¡û
>W2012152169
VUJW01000002
Actinomycetota
Nocardioides sp. BN140041 [VUJW]
253730
253804
+
Met
CAT
[ENA]
¡û
>W2012152359
VUKC01000001
Actinomycetota
Georgenia satyanarayanai NBRC 107612 [VUKC]
101057
101131
+
Met
CAT
[ENA]
¡û
>W2012341349
WITM01000001
Actinomycetota
Nocardioides sp. dk4132 [WITM]
301642
301718
+
Met
CAT
[ENA]
¡û
>W2012356840
WJYO01000004
Actinomycetota
Mumia xiangluensis NEAU-KD1 T [WJYO]
146267
146341
+
Met
CAT
[ENA]
¡û
>W2012369155
WLCI01000002
Actinomycetota
Nocardioides sp. zg-579 [WLCI]
318923
318997
+
Met
CAT
[ENA]
¡û
>W2012369206
WLCJ01000003
Actinomycetota
Nocardioides sp. zg-578 [WLCJ]
301392
301466
+
Met
CAT
[ENA]
¡û
>W2012433960
WTFR01000002
Actinomycetota
Nocardioides sp. ZJ1313 [WTFR]
353328
353252
-
Met
CAT
[ENA]
¡û
>W2012433996
WTFS01000001
Actinomycetota
Nocardioides sp. ZJ1307 [WTFS]
780544
780620
+
Met
CAT
[ENA]
¡û
>W2012442206
WUEK01000006
Actinomycetota
Nocardioides sp. YIM 123512 [WUEK]
228026
228100
+
Met
CAT
[ENA]
¡û
>W2110031977
BMMR01000001
Actinomycetota
Nocardioides deserti CGMCC 4.7183 [BMMR]
1702040
1701966
-
Met
CAT
[ENA]
¡û
>W2110051323
BNAD01000002
Actinomycetota
Nocardioides flavus Wang et al. 2016 CGMCC 1.12791 [BNAD]
217953
217877
-
Met
CAT
[ENA]
¡û
>W2110221016
JACJGL010000014
Actinomycetota
Nocardioides dongkuii 406 [JACJGL]
122462
122388
-
Met
CAT
[ENA]
¡û
>W2110221049
JACJGM010000015
Actinomycetota
Nocardioides lijunqiniae S-531 [JACJGM]
8082
8008
-
Met
CAT
[ENA]
¡û
>W2110221108
JACJGN010000040
Actinomycetota
Nocardioides lijunqiniae 1598 [JACJGN]
34410
34484
+
Met
CAT
[ENA]
¡û
>W2110239589
JACMYB010000001
Actinomycetota
Nocardioides sp. zg-1228 [JACMYB]
1435827
1435903
+
Met
CAT
[ENA]
¡û
>W2110239648
JACMYC010000007
Actinomycetota
Nocardioides deserti SC8A-24 [JACMYC]
205819
205745
-
Met
CAT
[ENA]
¡û
>W2110259444
JACSPO010000001
Actinomycetota
Actinomycetaceae bacterium Sa1BUA1 [JACSPO]
1074333
1074259
-
Met
CAT
[ENA]
¡û
>W2110266319
JACUWQ010000003
Actinomycetota
Nocardioides sp. zg-578 [JACUWQ]
301392
301466
+
Met
CAT
[ENA]
¡û
>W2110285415
JACXYX010000005
Actinomycetota
Nocardioides ganghwensis 9920 [JACXYX]
291624
291700
+
Met
CAT
[ENA]
¡û
>W2110285462
JACXYY010000002
Actinomycetota
Nocardioides hwasunensis 19197 [JACXYY]
68607
68683
+
Met
CAT
[ENA]
¡û
>W2110285506
JACXYZ010000001
Actinomycetota
Nocardioides cavernae KCTC 39551 [JACXYZ]
1895005
1895081
+
Met
CAT
[ENA]
¡û
>W2110319759
JADHZD010000001
Actinomycetota
Nocardioides sp. JXJ CY 38 [JADHZD]
202636
202560
-
Met
CAT
[ENA]
¡û
>W2110441148
JAERJA010000004
Actinomycetota
Nocardioides sp. DJM-14 [JAERJA]
210677
210753
+
Met
CAT
[ENA]
¡û
>W2110446385
JAERSG010000001
Actinomycetota
Nocardioides sp. G10 [JAERSG]
63333
63257
-
Met
CAT
[ENA]
¡û
>W2110446502
JAERTX010000012
Actinomycetota
Nocardioides sp. zg-536 [JAERTX]
119801
119727
-
Met
CAT
[ENA]
¡û
>W2110446988
JAERWM010000024
Actinomycetota
Aeromicrobium sp. YIM 150415 [JAERWM]
67988
68064
+
Met
CAT
[ENA]
¡û
>W2110458446
JAFBCA010000001
Actinomycetota
Nocardioides cavernae DSM 29950 [JAFBCA]
4726320
4726244
-
Met
CAT
[ENA]
¡û
>W2110493782
JAFFJT010000018
Actinomycetota
Nocardioides sp. SYSU D00038 [JAFFJT]
63160
63234
+
Met
CAT
[ENA]
¡û
>W2110516075
JAFMSW010000001
Actinomycetota
Nocardioides sp. SYSU D00514 [JAFMSW]
2346045
2346121
+
Met
CAT
[ENA]
¡û
>W2110516126
JAFMSX010000002
Actinomycetota
Nocardioides sp. SYSU D00065 [JAFMSX]
285588
285664
+
Met
CAT
[ENA]
¡û
>W2110516191
JAFMSY010000004
Actinomycetota
Nocardioides sp. SYSU D00778 [JAFMSY]
35713
35789
+
Met
CAT
[ENA]
¡û
>W2110522901
JAGEMK010000005
Actinomycetota
Actinotalea sp. BY-33 [JAGEMK]
167089
167013
-
Met
CAT
[ENA]
¡û
>W2110576052
JAGVQR010000004
Actinomycetota
Nocardioides sp. J2M5 [JAGVQR]
407862
407786
-
Met
CAT
[ENA]
¡û
>W2110584058
JAGYYC010000001
Actinomycetota
Nocardioides sp. zg-ZUI104 [JAGYYC]
827269
827195
-
Met
CAT
[ENA]
¡û
>W2110656842
JAHWCI010000002
Actinomycetota
Mumia sp. zg.B17 [JAHWCI]
78376
78450
+
Met
CAT
[ENA]
¡û
>W2110656888
JAHWCJ010000001
Actinomycetota
Mumia sp. zg.B21 [JAHWCJ]
1376031
1375957
-
Met
CAT
[ENA]
¡û
>W2110656952
JAHWCK010000001
Actinomycetota
Mumia sp. zg.B53 [JAHWCK]
777876
777802
-
Met
CAT
[ENA]
¡û
>W2110669917
JAIEZQ010000001
Actinomycetota
Nocardioides sp. WL0053 [JAIEZQ]
1648887
1648961
+
Met
CAT
[ENA]
¡û
>C201147321
CP044344
Actinomycetota
Nocardioides sp. SB3-45 [CP044344]
2538898
2538824
-
Met
CAT
-
¡û
>W2110695129
JAIQZK010000004
Actinomycetota
Nocardioides sp. TRM66260-LWL [JAIQZK]
238314
238238
-
Met
CAT
[ENA]
¡û
>C201266397
CP053660
Actinomycetota
Nocardioides sp. zg-579 [CP053660]
591178
591252
+
Met
CAT
-
¡û
>C211031979
CP022295
Actinomycetota
Nocardioides aromaticivorans IC177 [CP022295]
753362
753436
+
Met
CAT
-
¡û
>C211032025
CP022296
Actinomycetota
Nocardioides sp. S5 [CP022296]
711946
712020
+
Met
CAT
-
¡û
>C211095275
CP053928
Actinomycetota
Nocardioides sp. WS12 [CP053928]
1170756
1170830
+
Met
CAT
-
¡û
>C211125524
CP059903
Actinomycetota
Nocardioides sp. S-713 [CP059903]
729849
729923
+
Met
CAT
-
¡û
>C211137466
CP060713
Actinomycetota
Nocardioides mesophilus KACC 16243 [CP060713]
2505439
2505513
+
Met
CAT
-
¡û
>C211153018
CP061769
Actinomycetota
Nocardioides sp. ZJ1313 [CP061769]
499214
499290
+
Met
CAT
-
¡û
>C211280934
CP070961
Actinomycetota
Nocardioides sp. zg-1228 [CP070961]
640857
640933
+
Met
CAT
-
¡û
>C211330945
CP074406
Actinomycetota
Nocardioides sp. zg-536 [CP074406]
487563
487637
+
Met
CAT
-
¡û
>C211336940
CP075371
Actinomycetota
Nocardioides aquaticus KCTC 9944 [CP075371]
4174578
4174502
-
Met
CAT
-
¡û
>C211342162
CP076053
Actinomycetota
Nocardioidaceae bacterium TYQ2 [CP076053]
1162287
1162213
-
Met
CAT
-
¡û
>C211394338
CP082273
Actinomycetota
Nocardioides sp. SCSIO 67246 [CP082273]
433915
433989
+
Met
CAT
-
¡û
>C211399654
CP082922
Actinomycetota
Nocardioides rotundus MCCC 1A10561 [CP082922]
427537
427613
+
Met
CAT
-
¡û
>W2110737299
JAJENH010000025
Actinomycetota
Cellulomonas sp. zg-Y338 [JAJENH]
24298
24374
+
Met
CAT
[ENA]
¡û
>W2110737346
JAJENI010000023
Actinomycetota
Cellulomonas sp. zg-Y138 [JAJENI]
24337
24413
+
Met
CAT
[ENA]
¡û
>C231084846
CP060034
Actinomycetota
Nocardioides sp. InS609-2 [CP060034]
3277709
3277783
+
Met
CAT
-
¡û
>C231244833
CP087710
Actinomycetota
Nocardioides okcheonensis MMS20-HV4-12 [CP087710]
3358796
3358872
+
Met
CAT
-
¡û
>C231252283
CP088262
Actinomycetota
Nocardioides sp. cx-173 [CP088262]
3902750
3902676
-
Met
CAT
-
¡û
>C231319175
CP092535
Actinomycetota
Nocardioides sp. TF02-7 [CP092535]
1285836
1285762
-
Met
CAT
-
¡û
>C231445324
CP101988
Actinomycetota
Cellulomonas sp. zg.Y338 [CP101988]
2973932
2973856
-
Met
CAT
-
¡û
>C241098613
CP045649
Actinomycetota
Nocardioides sp. dk884 [CP045649]
607839
607915
+
Met
CAT
-
¡û
>C241138125
CP049866
Actinomycetota
Nocardioides piscis HDW12A [CP049866]
454361
454285
-
Met
CAT
-
¡û
>C241138159
CP049867
Actinomycetota
Nocardioides sp. HDW12B [CP049867]
3356617
3356543
-
Met
CAT
-
¡û
>C241176430
CP059164
Actinomycetota
Nocardioides ungokensis LMG 28591 [CP059164]
686483
686557
+
Met
CAT
-
¡û
>C241180003
CP059901
Actinomycetota
Mumia sp. ZJ1417 [CP059901]
3447743
3447669
-
Met
CAT
-
¡û
>C241221110
CP113431
Actinomycetota
Nocardioides sp. Arc9.136 [CP113431]
692266
692340
+
Met
CAT
-
¡û
>C241314813
CP133990
Actinomycetota
Cellulomonas sp. ATA003 [CP133990]
266147
266221
+
Met
CAT
-
¡û
>C241317230
CP134227
Actinomycetota
Nocardioides marmorisolisilvae YR1 [CP134227]
2215305
2215231
-
Met
CAT
-
¡û
>W1511398088
JTDJ01000064
Actinomycetota
Mumia flava MUSC 201 [JTDJ]
41915
41839
-
Met
CAT
[ENA]
¡û
>W11187353
CAEF01000082
Actinomycetota
Aeromicrobium massiliense JC14 [CAEF]
350
426
+
Met
CAT
[ENA]
¡û
>W1610029650
AXCZ01000112
Actinomycetota
Cellulomonas bogoriensis 69B4 = DSM 16987 [AXCZ]
3771
3695
-
Met
CAT
[ENA]
¡û
>W1610048755
BBEJ01000623
Actinomycetota
Nocardioides sp. DN36 [BBEJ]
245
321
+
Met
CAT
[ENA]
¡û
>W1610051408
BBGV01000783
Actinomycetota
Nocardioides pyridinolyticus JCM 10369 [BBGV]
522
596
+
Met
CAT
[ENA]
¡û
>W1610207186
FCOT01000009
Actinomycetota
Cellulomonas timonensis SN7 [FCOT]
126929
127005
+
Met
CAT
[ENA]
¡û
>W1610723159
LMDE01000009
Actinomycetota
Nocardioides sp. Root122 [LMDE]
297744
297820
+
Met
CAT
[ENA]
¡û
>W1610723331
LMDH01000001
Actinomycetota
Aeromicrobium sp. Root344 [LMDH]
759319
759243
-
Met
CAT
[ENA]
¡û
>W1610725238
LMER01000015
Actinomycetota
Angustibacter sp. Root456 [LMER]
193561
193487
-
Met
CAT
[ENA]
¡û
>W1610727988
LMGV01000007
Actinomycetota
Nocardioides sp. Root614 [LMGV]
46797
46871
+
Met
CAT
[ENA]
¡û
>W1610728683
LMHJ01000003
Actinomycetota
Nocardioides sp. Root682 [LMHJ]
46851
46925
+
Met
CAT
[ENA]
¡û
>W1610729463
LMIA01000001
Actinomycetota
Nocardioides sp. Root190 [LMIA]
322426
322352
-
Met
CAT
[ENA]
¡û
>W1610730179
LMIP01000011
Actinomycetota
Nocardioides sp. Root79 [LMIP]
160690
160616
-
Met
CAT
[ENA]
¡û
>W1610730337
LMIS01000001
Actinomycetota
Aeromicrobium sp. Root236 [LMIS]
1702825
1702749
-
Met
CAT
[ENA]
¡û
>W1610730367
LMIT01000010
Actinomycetota
Nocardioides sp. Root240 [LMIT]
252532
252458
-
Met
CAT
[ENA]
¡û
>W1610743000
LMSM01000006
Actinomycetota
Nocardioides sp. Soil774 [LMSM]
765940
766016
+
Met
CAT
[ENA]
¡û
>W1610743047
LMSN01000015
Actinomycetota
Nocardioides sp. Soil777 [LMSN]
228191
228267
+
Met
CAT
[ENA]
¡û
>W1610743412
LMSU01000001
Actinomycetota
Nocardioides sp. Soil805 [LMSU]
1378229
1378153
-
Met
CAT
[ENA]
¡û
>W1610937802
LUPF01000006
Actinomycetota
Nocardioides sp. REDSEA-S22_B2 [LUPF]
122731
122655
-
Met
CAT
[ENA]
¡û
>W1610937893
LUPH01000121
Actinomycetota
Nocardioides sp. REDSEA-S28_B4 [LUPH]
7867
7791
-
Met
CAT
[ENA]
¡û
>W1610937930
LUPI01000031
Actinomycetota
Nocardioides sp. REDSEA-S30_B4 [LUPI]
75814
75738
-
Met
CAT
[ENA]
¡û
>W1610937954
LUPJ01000029
Actinomycetota
Nocardioides sp. REDSEA-S31_B4 [LUPJ]
2800
2724
-
Met
CAT
[ENA]
¡û
>W1610938023
LUPK01000054
Actinomycetota
Nocardioides sp. REDSEA-S33_B3 [LUPK]
41477
41553
+
Met
CAT
[ENA]
¡û
>W1610938048
LUPL01000032
Actinomycetota
Nocardioides sp. REDSEA-S34_B5 [LUPL]
5192
5116
-
Met
CAT
[ENA]
¡û
>W1610938146
LUPO01000001
Actinomycetota
Nocardioides sp. REDSEA-S39_B2 [LUPO]
123549
123473
-
Met
CAT
[ENA]
¡û
>W1610938196
LUPP01000026
Actinomycetota
Nocardioides sp. REDSEA-S40_B4 [LUPP]
41311
41387
+
Met
CAT
[ENA]
¡û
>W1610938226
LUPQ01000003
Actinomycetota
Nocardioides sp. REDSEA-S43_B3 [LUPQ]
7930
7854
-
Met
CAT
[ENA]
¡û
>W1710027020
AXCZ01000112
Actinomycetota
Cellulomonas bogoriensis 69B4 = DSM 16987 [AXCZ]
3771
3695
-
Met
CAT
[ENA]
¡û
>W1710045227
BBEJ01000623
Actinomycetota
Nocardioides sp. DN36 [BBEJ]
245
321
+
Met
CAT
[ENA]
¡û
>W1710047786
BBGV01000783
Actinomycetota
Nocardioides pyridinolyticus JCM 10369 [BBGV]
522
596
+
Met
CAT
[ENA]
¡û
>W1710207880
FCOT01000009
Actinomycetota
Cellulomonas timonensis SN7 [FCOT]
126929
127005
+
Met
CAT
[ENA]
¡û
>W1710512540
FMZM01000007
Actinomycetota
Nocardioides lianchengensis [FMZM]
221472
221546
+
Met
CAT
[ENA]
¡û
>W1710523565
FNIC01000002
Actinomycetota
Nocardioides szechwanensis [FNIC]
120400
120474
+
Met
CAT
[ENA]
¡û
>W1710534280
FNRT01000002
Actinomycetota
Nocardioides exalbidus [FNRT]
2153057
2153133
+
Met
CAT
[ENA]
¡û
>W1710556294
FOKC01000004
Actinomycetota
Nocardioides alpinus [FOKC]
280909
280833
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
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Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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