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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.311726 (173 seq.)
>W1710867082
LMHZ01000013
Betaproteobacteria
Noviherbaspirillum sp. Root189 [LMHZ]
61556
61632
+
Met
CAT
[ENA]
¡û
>W1710875450
LMOJ01000025
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
656904
656828
-
Met
CAT
[ENA]
¡û
>W1710875451
LMOJ01000025
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
656756
656680
-
Met
CAT
[ENA]
¡û
>W1711394672
MEQN01000087
Betaproteobacteria
Betaproteobacteria bacterium RBG_16_58_11 [MEQN]
4463
4539
+
Met
CAT
[ENA]
¡û
>W1711413740
MGWS01000033
Betaproteobacteria
Gallionellales bacterium GWA2_60_18 [MGWS]
69825
69749
-
Met
CAT
[ENA]
¡û
>W1711582078
MNUX01000095
Betaproteobacteria
Gallionellaceae bacterium CG1_02_60_325 [MNUX]
77
1
-
Met
CAT
[ENA]
¡û
>W1711583483
MNXH01000032
Betaproteobacteria
Gallionellaceae bacterium CG1_02_60_948 [MNXH]
1668
1592
-
Met
CAT
[ENA]
¡û
>W131219579
ATYR01000018
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
97208
97132
-
Met
CAT
[ENA]
¡û
>W131219580
ATYR01000018
Betaproteobacteria
Massilia alkalitolerans DSM 17462 [ATYR]
97058
96982
-
Met
CAT
[ENA]
¡û
>WENV180017421
FSWY01000046
[FSWY] metagenome; soil
351
275
-
Met
CAT
[ENA]
¡û
>WENV180018313
FSYV01000526
[FSYV] metagenome; soil
31076
31152
+
Met
CAT
[ENA]
¡û
>WENV180022331
FTFY01000950
[FTFY] metagenome; soil
11125
11201
+
Met
CAT
[ENA]
¡û
>WENV180026707
FTIU01033320
[FTIU] metagenome; soil
291
367
+
Met
CAT
[ENA]
¡û
>WENV180032847
FTKD01002117
[FTKD] metagenome; soil
12709
12633
-
Met
CAT
[ENA]
¡û
>WENV180035752
FTLB01003649
[FTLB] metagenome; soil
2
78
+
Met
CAT
[ENA]
¡û
>WENV180035768
FTLB01005477
[FTLB] metagenome; soil
100937
100861
-
Met
CAT
[ENA]
¡û
>WENV180041390
LLBZ010117231
[LLBZ] soil metagenome; soil from tomato rhizosphere
2153
2229
+
Met
CAT
[ENA]
¡û
>WENV180248431
OBEQ010108141
[OBEQ] groundwater metagenome; groundwater
710
786
+
Met
CAT
[ENA]
¡û
>WENV180255388
OBEQ010720570
[OBEQ] groundwater metagenome; groundwater
827
751
-
Met
CAT
[ENA]
¡û
>WENV180260750
OBEQ011227970
[OBEQ] groundwater metagenome; groundwater
4
80
+
Met
CAT
[ENA]
¡û
>WENV180260871
OBEQ011240151
[OBEQ] groundwater metagenome; groundwater
596
672
+
Met
CAT
[ENA]
¡û
>WENV180292960
OBIV01730757
[OBIV] soil metagenome; Clay
117
193
+
Met
CAT
[ENA]
¡û
>WENV180311292
OBJT01207515
[OBJT] soil metagenome; soil
153
229
+
Met
CAT
[ENA]
¡û
>WENV180350928
OBLQ010016544
[OBLQ] soil metagenome; soil
1750
1826
+
Met
CAT
[ENA]
¡û
>W141258897
CBXX010000007
Betaproteobacteria
Herbaspirillum sp. RV1423 [CBXX]
79806
79882
+
Met
CAT
[ENA]
¡û
>WENV183695560
ORMF012409418
[ORMF] groundwater metagenome; groundwater
321
397
+
Met
CAT
[ENA]
¡û
>WENV183697739
OUNK010050420
[OUNK] metagenome; soil
396
472
+
Met
CAT
[ENA]
¡û
>WENV183726689
PJTO01000068
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
121921
121845
-
Met
CAT
[ENA]
¡û
>WENV183726690
PJTO01000068
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
121771
121695
-
Met
CAT
[ENA]
¡û
>WENV183727918
PJTP01005460
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
977
1053
+
Met
CAT
[ENA]
¡û
>WENV183727919
PJTP01005460
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
1127
1203
+
Met
CAT
[ENA]
¡û
>WENV183728504
PJTQ01000090
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
121921
121845
-
Met
CAT
[ENA]
¡û
>WENV183728505
PJTQ01000090
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
121771
121695
-
Met
CAT
[ENA]
¡û
>WENV183730099
PJTR01000664
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
1132
1208
+
Met
CAT
[ENA]
¡û
>WENV183733745
PJTY01020373
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
370
294
-
Met
CAT
[ENA]
¡û
>WENV183735931
PJUB01012834
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
128
204
+
Met
CAT
[ENA]
¡û
>WENV183737269
PJUD01002342
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3758
3682
-
Met
CAT
[ENA]
¡û
>WENV183737270
PJUD01002342
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
3608
3532
-
Met
CAT
[ENA]
¡û
>WENV183739181
PJUE01002721
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
1657
1581
-
Met
CAT
[ENA]
¡û
>WENV183740427
PJUF01002019
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
6290
6214
-
Met
CAT
[ENA]
¡û
>WENV183740428
PJUF01002019
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
6140
6064
-
Met
CAT
[ENA]
¡û
>WENV183744213
PJUK01002131
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
2282
2206
-
Met
CAT
[ENA]
¡û
>WENV170558014
CXWL01046314
[CXWL] groundwater metagenome; biofilm material
65836
65760
-
Met
CAT
[ENA]
¡û
>WENV170558879
CXWL01097677
[CXWL] groundwater metagenome; biofilm material
3599
3675
+
Met
CAT
[ENA]
¡û
>WENV170559256
CXWL01116217
[CXWL] groundwater metagenome; biofilm material
2817
2741
-
Met
CAT
[ENA]
¡û
>WENV170621750
FUWD013071632
[FUWD] metagenome; unknown
98
22
-
Met
CAT
[ENA]
¡û
>WENV170629937
FUWD013287319
[FUWD] metagenome; unknown
98
22
-
Met
CAT
[ENA]
¡û
>WENV170711066
LNFM01003428
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
2909
2985
+
Met
CAT
[ENA]
¡û
>WENV170712500
LNFM01014122
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
4305
4229
-
Met
CAT
[ENA]
¡û
>WENV170961334
MLJW01000008
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
335081
335005
-
Met
CAT
[ENA]
¡û
>WENV170961450
MLJW01000047
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
36570
36646
+
Met
CAT
[ENA]
¡û
>WENV170961486
MLJW01000077
[MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for
91554
91630
+
Met
CAT
[ENA]
¡û
>C181071842
CP022736
Betaproteobacteria
Herbaspirillum sp. meg3 [CP022736]
4409256
4409332
+
Met
CAT
-
¡û
>C191125967
CP034464
Betaproteobacteria
Undibacterium parvum DSM 23061 [CP034464]
3471839
3471763
-
Met
CAT
-
¡û
>C191138928
CP035311
Betaproteobacteria
Janthinobacterium sp. 17J80-10 [CP035311]
3679243
3679319
+
Met
CAT
-
¡û
>C191173959
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
3868022
3868098
+
Met
CAT
-
¡û
>W09134964
ACVF01000006
Betaproteobacteria
Sideroxydans lithotrophicus ES-1 [ACVF]
101694
101770
+
Met
CAT
[ENA]
¡û
>W1910548783
FZOT01000015
Betaproteobacteria
Noviherbaspirillum humi U15 [FZOT]
58561
58485
-
Met
CAT
[ENA]
¡û
>W1910698926
MEQR01000069
Betaproteobacteria
Betaproteobacteria bacterium RBG_19FT_COMBO_58_11 [MEQR]
4773
4849
+
Met
CAT
[ENA]
¡û
>W1910700082
MESE01000057
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
136745
136821
+
Met
CAT
[ENA]
¡û
>W1911572357
PDBX01000001
Betaproteobacteria
Collimonas sp. PA-H2 [PDBX]
1284270
1284346
+
Met
CAT
[ENA]
¡û
>W1911647623
QAJP01000010
Betaproteobacteria
Herminiimonas sp. KBW02 [QAJP]
79841
79917
+
Met
CAT
[ENA]
¡û
>W1911802741
QYUN01000002
Betaproteobacteria
Herbaspirillum sp. K2R10-39 [QYUN]
3089350
3089426
+
Met
CAT
[ENA]
¡û
>W1911802787
QYUO01000001
Betaproteobacteria
Herbaspirillum sp. K1R23-30 [QYUO]
2851038
2851114
+
Met
CAT
[ENA]
¡û
>W1810399995
PYFP01000001
Betaproteobacteria
Glaciimonas sp. PCH181 [PYFP]
2496207
2496283
+
Met
CAT
[ENA]
¡û
>W1810659456
QJKB01000004
Betaproteobacteria
Undibacterium pigrum DSM 19792 [QJKB]
46498
46422
-
Met
CAT
[ENA]
¡û
>C151082392
CP011409
Betaproteobacteria
Herbaspirillum hiltneri N3 [CP011409]
1528285
1528209
-
Met
CAT
-
¡û
>W2010309989
CABWLS010000016
Betaproteobacteria
Massilia sp. 9I [CABWLS]
535715
535639
-
Met
CAT
[ENA]
¡û
>W2010430544
FZOT01000015
Betaproteobacteria
Noviherbaspirillum humi U15 [FZOT]
58561
58485
-
Met
CAT
[ENA]
¡û
>W2010488520
JAAIVB010000021
Betaproteobacteria
Noviherbaspirillum sp. 17J57-3 [JAAIVB]
21730
21654
-
Met
CAT
[ENA]
¡û
>W2010652068
JABXYJ010000009
Betaproteobacteria
Undibacterium oligocarboniphilum EM 1 [JABXYJ]
9341
9265
-
Met
CAT
[ENA]
¡û
>W2010695140
JACHBX010000004
Betaproteobacteria
Massilia aurea AT3.2 [JACHBX]
471100
471024
-
Met
CAT
[ENA]
¡û
>W2010695141
JACHBX010000004
Betaproteobacteria
Massilia aurea AT3.2 [JACHBX]
470964
470888
-
Met
CAT
[ENA]
¡û
>W2010696397
JACHCU010000001
Betaproteobacteria
Herbaspirillum sp. SJZ102 [JACHCU]
666575
666499
-
Met
CAT
[ENA]
¡û
>W2010716969
JACHXS010000002
Betaproteobacteria
Massilia umbonata CECT 7753 [JACHXS]
621149
621073
-
Met
CAT
[ENA]
¡û
>W2010717602
JACHYE010000011
Betaproteobacteria
Herbaspirillum sp. Sphag64 [JACHYE]
69161
69085
-
Met
CAT
[ENA]
¡û
>W2010717652
JACHYF010000013
Betaproteobacteria
Herbaspirillum sp. Sphag1AN [JACHYF]
69227
69303
+
Met
CAT
[ENA]
¡û
>W2010832352
MEQR01000069
Betaproteobacteria
Betaproteobacteria bacterium RBG_19FT_COMBO_58_11 [MEQR]
4773
4849
+
Met
CAT
[ENA]
¡û
>W2010833508
MESE01000057
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
136745
136821
+
Met
CAT
[ENA]
¡û
>W2011182778
PDBX01000001
Betaproteobacteria
Collimonas sp. PA-H2 [PDBX]
1284270
1284346
+
Met
CAT
[ENA]
¡û
>W2011235607
QAJP01000010
Betaproteobacteria
Herminiimonas sp. KBW02 [QAJP]
79841
79917
+
Met
CAT
[ENA]
¡û
>W2011344372
QYUN01000002
Betaproteobacteria
Herbaspirillum sp. K2R10-39 [QYUN]
3089350
3089426
+
Met
CAT
[ENA]
¡û
>W2011344418
QYUO01000001
Betaproteobacteria
Herbaspirillum sp. K1R23-30 [QYUO]
2851038
2851114
+
Met
CAT
[ENA]
¡û
>W2011353330
RAIL01000001
Betaproteobacteria
Collimonas fungivorans ES_Al-A1 [RAIL]
1291406
1291330
-
Met
CAT
[ENA]
¡û
>W2011497031
RXKK01000003
Betaproteobacteria
Undibacterium sp. S11R28 [RXKK]
2746411
2746335
-
Met
CAT
[ENA]
¡û
>W2011626369
SLZQ01000002
Betaproteobacteria
Paucimonas lemoignei DSM 7445 [SLZQ]
69816
69740
-
Met
CAT
[ENA]
¡û
>W2011673684
SPQI01000156
Betaproteobacteria
Oxalobacteraceae bacterium OM1 [SPQI]
359
435
+
Met
CAT
[ENA]
¡û
>W2012012902
VFAH01000010
Betaproteobacteria
Noviherbaspirillum sp. 122213-3 [VFAH]
74324
74248
-
Met
CAT
[ENA]
¡û
>W2012018625
VFNG01000007
Betaproteobacteria
Herbaspirillum sp. SJZ130 [VFNG]
329590
329666
+
Met
CAT
[ENA]
¡û
>W2012018745
VFNI01000002
Betaproteobacteria
Herbaspirillum sp. SJZ106 [VFNI]
666575
666499
-
Met
CAT
[ENA]
¡û
>W2012045605
VIUO01000005
Betaproteobacteria
Herbaspirillum sp. SJZ099 [VIUO]
321931
322007
+
Met
CAT
[ENA]
¡û
>W2012047545
VIVV01000008
Betaproteobacteria
Collimonas arenae 515 [VIVV]
120506
120582
+
Met
CAT
[ENA]
¡û
>W2012048014
VIWD01000003
Betaproteobacteria
Herbaspirillum hiltneri 3195 [VIWD]
32431
32507
+
Met
CAT
[ENA]
¡û
>W2012144264
VTTH01000005
Betaproteobacteria
Oxalobacteraceae bacterium CHu64-6-4 [VTTH]
390090
390166
+
Met
CAT
[ENA]
¡û
>W2012337181
WINI01000001
Betaproteobacteria
Glaciimonas sp. GS1 [WINI]
1159617
1159541
-
Met
CAT
[ENA]
¡û
>W2012400503
WNWM01000002
Betaproteobacteria
Massilia dura DSM 17513 [WNWM]
4120550
4120474
-
Met
CAT
[ENA]
¡û
>W2012509443
WXXL01000064
Betaproteobacteria
PMB3(1) [WXXL]
65630
65706
+
Met
CAT
[ENA]
¡û
>W2110018762
BMCG01000005
Betaproteobacteria
Oxalicibacterium flavum CCM 7086 [BMCG]
292533
292457
-
Met
CAT
[ENA]
¡û
>W2110020103
BMDI01000003
Betaproteobacteria
Oxalicibacterium faecigallinarum CCM 2767 [BMDI]
281372
281296
-
Met
CAT
[ENA]
¡û
>W2110020329
BMDP01000004
Betaproteobacteria
Oxalicibacterium solurbis CCM 7664 [BMDP]
162590
162514
-
Met
CAT
[ENA]
¡û
>W2110021000
BMED01000003
Betaproteobacteria
Undibacterium terreum CGMCC 1.10998 [BMED]
591089
591013
-
Met
CAT
[ENA]
¡û
>W2110046858
BMWU01000086
Betaproteobacteria
Massilia dura KCTC 12342 [BMWU]
5997
6073
+
Met
CAT
[ENA]
¡û
>W2110049646
BMYU01000010
Betaproteobacteria
Undibacterium squillarum KCTC 23917 [BMYU]
17737
17661
-
Met
CAT
[ENA]
¡û
>W2110097089
CAJEVT010000004
Betaproteobacteria
Herminiimonas sp. Marseille-P9896 [CAJEVT]
238685
238609
-
Met
CAT
[ENA]
¡û
>ENV09004055
ADIG01001566
Groundwater metagenome 4000601.lucy.pga.C1
370
294
-
Met
CAT
[ENA]
¡û
>W2110241558
JACOFS010000010
Betaproteobacteria
Undibacterium oligocarboniphilum CGMCC 1.12448 [JACOFS]
101585
101661
+
Met
CAT
[ENA]
¡û
>W2110241703
JACOFV010000021
Betaproteobacteria
Undibacterium jejuense KACC 12607 [JACOFV]
39326
39402
+
Met
CAT
[ENA]
¡û
>W2110241786
JACOFX010000002
Betaproteobacteria
Undibacterium sp. NL8W [JACOFX]
392210
392134
-
Met
CAT
[ENA]
¡û
>W2110241879
JACOFY010000006
Betaproteobacteria
Undibacterium sp. LX40W [JACOFY]
75441
75365
-
Met
CAT
[ENA]
¡û
>W2110241926
JACOFZ010000006
Betaproteobacteria
Undibacterium sp. LX22W [JACOFZ]
75441
75365
-
Met
CAT
[ENA]
¡û
>W2110242080
JACOGC010000008
Betaproteobacteria
Undibacterium sp. FT31W [JACOGC]
9411
9335
-
Met
CAT
[ENA]
¡û
>W2110242260
JACOGF010000023
Betaproteobacteria
Undibacterium sp. CY18W [JACOGF]
47554
47478
-
Met
CAT
[ENA]
¡û
>W2110289216
JACYOX010000002
Betaproteobacteria
Noviherbaspirillum soli SUEMI10 [JACYOX]
303630
303554
-
Met
CAT
[ENA]
¡û
>W2110290369
JACYUA010000039
Betaproteobacteria
Massilia sp. CFBP 13647 CFBP13647 [JACYUA]
7750
7674
-
Met
CAT
[ENA]
¡û
>W2110290370
JACYUA010000039
Betaproteobacteria
Massilia sp. CFBP 13647 CFBP13647 [JACYUA]
7616
7540
-
Met
CAT
[ENA]
¡û
>W2110290440
JACYUC010000002
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8763 CFBP8763 [JACYUC]
613340
613416
+
Met
CAT
[ENA]
¡û
>W2110290441
JACYUC010000002
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8763 CFBP8763 [JACYUC]
613476
613552
+
Met
CAT
[ENA]
¡û
>W2110290566
JACYUE010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8761 CFBP8761 [JACYUE]
510542
510466
-
Met
CAT
[ENA]
¡û
>W2110290567
JACYUE010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8761 CFBP8761 [JACYUE]
510406
510330
-
Met
CAT
[ENA]
¡û
>W2110290752
JACYUN010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8755 CFBP8755 [JACYUN]
483698
483622
-
Met
CAT
[ENA]
¡û
>W2110290753
JACYUN010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8755 CFBP8755 [JACYUN]
483562
483486
-
Met
CAT
[ENA]
¡û
>W2110290927
JACYUQ010000003
Betaproteobacteria
Oxalobacteraceae sp. CFBP 13730 CFBP13730 [JACYUQ]
984881
984957
+
Met
CAT
[ENA]
¡û
>W2110290928
JACYUQ010000003
Betaproteobacteria
Oxalobacteraceae sp. CFBP 13730 CFBP13730 [JACYUQ]
985017
985093
+
Met
CAT
[ENA]
¡û
>W2110291261
JACYUX010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8753 CFBP8753 [JACYUX]
459358
459282
-
Met
CAT
[ENA]
¡û
>W2110291262
JACYUX010000001
Betaproteobacteria
Oxalobacteraceae sp. CFBP 8753 CFBP8753 [JACYUX]
459222
459146
-
Met
CAT
[ENA]
¡û
>W2110291337
JACYUY010000039
Betaproteobacteria
Massilia sp. CFBP 13721 CFBP13721 [JACYUY]
7738
7662
-
Met
CAT
[ENA]
¡û
>W2110291338
JACYUY010000039
Betaproteobacteria
Massilia sp. CFBP 13721 CFBP13721 [JACYUY]
7604
7528
-
Met
CAT
[ENA]
¡û
>W2110291716
JACYVK010000003
Betaproteobacteria
Oxalobacteraceae sp. CFBP 13708 CFBP13708 [JACYVK]
584051
584127
+
Met
CAT
[ENA]
¡û
>W2110291717
JACYVK010000003
Betaproteobacteria
Oxalobacteraceae sp. CFBP 13708 CFBP13708 [JACYVK]
584187
584263
+
Met
CAT
[ENA]
¡û
>W2110292663
JACYXF010000023
Betaproteobacteria
Noviherbaspirillum malthae CC-AFH3 [JACYXF]
16330
16406
+
Met
CAT
[ENA]
¡û
>W2110360978
JADOEL010000004
Betaproteobacteria
Herminiimonas contaminans Marseille-Q4544 [JADOEL]
238235
238159
-
Met
CAT
[ENA]
¡û
>W2110437936
JAEPBG010000001
Betaproteobacteria
Noviherbaspirillum pedocola DKR-6 [JAEPBG]
496389
496465
+
Met
CAT
[ENA]
¡û
>W2110566796
JAGQED010000027
Betaproteobacteria
Collimonas antrihumi DSM 104040 [JAGQED]
6288
6212
-
Met
CAT
[ENA]
¡û
>W2110566829
JAGQEE010000004
Betaproteobacteria
Collimonas sp. RLT1W51 [JAGQEE]
209001
209077
+
Met
CAT
[ENA]
¡û
>W2110566856
JAGQEF010000003
Betaproteobacteria
Collimonas sp. RXD172-2 [JAGQEF]
339715
339791
+
Met
CAT
[ENA]
¡û
>W2110566938
JAGQEG010000177
Betaproteobacteria
Collimonas sp. RXD178 [JAGQEG]
4343
4419
+
Met
CAT
[ENA]
¡û
>W2110570617
JAGSPJ010000002
Betaproteobacteria
Undibacterium sp. FT137W [JAGSPJ]
107204
107280
+
Met
CAT
[ENA]
¡û
>W2110570837
JAGSPN010000014
Betaproteobacteria
Undibacterium sp. LFS511W [JAGSPN]
110653
110729
+
Met
CAT
[ENA]
¡û
>W2110696216
JAIUCY010000005
Betaproteobacteria
Herbaspirillum seropedicae alder98 [JAIUCY]
209309
209385
+
Met
CAT
[ENA]
¡û
>C211085875
CP051152
Betaproteobacteria
Undibacterium piscinae S11R28 [CP051152]
3896420
3896344
-
Met
CAT
-
¡û
>C211168357
CP062941
Betaproteobacteria
Massilia sp. LPB0304 [CP062941]
2077432
2077356
-
Met
CAT
-
¡û
>C211168358
CP062941
Betaproteobacteria
Massilia sp. LPB0304 [CP062941]
2077294
2077218
-
Met
CAT
-
¡û
>C231003916
AP023423
Betaproteobacteria
Sideroxyarcus emersonii MIZ01 [AP023423]
372918
372994
+
Met
CAT
-
¡û
>C231468949
CP103371
Betaproteobacteria
Massilia sp. H6 [CP103371]
3779268
3779344
+
Met
CAT
-
¡û
>C231468950
CP103371
Betaproteobacteria
Massilia sp. H6 [CP103371]
3779416
3779492
+
Met
CAT
-
¡û
>C241007179
AP022853
Betaproteobacteria
Sulfurimicrobium lacus skT11 [AP022853]
802876
802800
-
Met
CAT
-
¡û
>C241145445
CP050451
Betaproteobacteria
Massilia sp. Se16.2.3 [CP050451]
42574
42650
+
Met
CAT
-
¡û
>C241145446
CP050451
Betaproteobacteria
Massilia sp. Se16.2.3 [CP050451]
42711
42787
+
Met
CAT
-
¡û
>C241145604
CP050454
Betaproteobacteria
Massilia sp. Dwa41.01b [CP050454]
4596719
4596795
+
Met
CAT
-
¡û
>C241145605
CP050454
Betaproteobacteria
Massilia sp. Dwa41.01b [CP050454]
4596856
4596932
+
Met
CAT
-
¡û
>C241380694
LR699166
Betaproteobacteria
Sideroxydans sp. CL21 [LR699166]
463010
463086
+
Met
CAT
-
¡û
>C10111854
CP001965
Betaproteobacteria
Sideroxydans lithotrophicus ES-1 [CP001965]
464460
464536
+
Met
CAT
[Ensembl]
¡û
>C11105070
CP002745
Betaproteobacteria
Collimonas fungivorans Ter331 [CP002745]
4165411
4165487
+
Met
CAT
[Ensembl]
¡û
>W1511657395
LELH02000001
Betaproteobacteria
Massilia sp. WF1 [LELH]
441917
441841
-
Met
CAT
[ENA]
¡û
>W1511683839
LFLT01000026
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
62994
63070
+
Met
CAT
[ENA]
¡û
>C161043179
CP012640
Betaproteobacteria
Massilia sp. WG5 [CP012640]
5461201
5461277
+
Met
CAT
-
¡û
>C161053591
CP013232
Betaproteobacteria
Collimonas fungivorans Ter6 [CP013232]
4600118
4600194
+
Met
CAT
[Ensembl]
¡û
>C161053646
CP013233
Betaproteobacteria
Collimonas arenae Ter10 [CP013233]
3668650
3668726
+
Met
CAT
-
¡û
>C161053690
CP013234
Betaproteobacteria
Collimonas pratensis Ter91 [CP013234]
4554384
4554460
+
Met
CAT
[Ensembl]
¡û
>C161053742
CP013235
Betaproteobacteria
Collimonas arenae Ter282 [CP013235]
3653872
3653948
+
Met
CAT
[Ensembl]
¡û
>C161053790
CP013236
Betaproteobacteria
Collimonas pratensis Ter291 [CP013236]
4579952
4580028
+
Met
CAT
[Ensembl]
¡û
>W121061950
AJHH01000014
Betaproteobacteria
Herbaspirillum lusitanum P6-12 [AJHH]
641
717
+
Met
CAT
[ENA]
¡û
>W121085183
AKJA01000129
Betaproteobacteria
Herbaspirillum sp. YR522 [AKJA]
69221
69297
+
Met
CAT
[ENA]
¡û
>W1610070449
BCTG01000049
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
13332
13408
+
Met
CAT
[ENA]
¡û
>W1610729428
LMHZ01000013
Betaproteobacteria
Noviherbaspirillum sp. Root189 [LMHZ]
61556
61632
+
Met
CAT
[ENA]
¡û
>W1610737796
LMOJ01000025
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
656904
656828
-
Met
CAT
[ENA]
¡û
>W1610737797
LMOJ01000025
Betaproteobacteria
Massilia sp. Leaf139 [LMOJ]
656756
656680
-
Met
CAT
[ENA]
¡û
>W1710067822
BCTG01000049
Betaproteobacteria
Herbaspirillum chlorophenolicum NBRC 102525 [BCTG]
13332
13408
+
Met
CAT
[ENA]
¡û
>W1710530356
FNOR01000005
Betaproteobacteria
Collimonas sp. OK242 [FNOR]
170289
170213
-
Met
CAT
[ENA]
¡û
>W1710557537
FOLC01000010
Betaproteobacteria
Collimonas sp. OK412 [FOLC]
93712
93636
-
Met
CAT
[ENA]
¡û
>W1710557612
FOLD01000037
Betaproteobacteria
Massilia yuzhufengensis [FOLD]
4420
4344
-
Met
CAT
[ENA]
¡û
>W1710557613
FOLD01000037
Betaproteobacteria
Massilia yuzhufengensis [FOLD]
4283
4207
-
Met
CAT
[ENA]
¡û
>W1710564226
FOQI01000013
Betaproteobacteria
Collimonas sp. OK307 [FOQI]
119164
119240
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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