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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.312922 (162 seq.)
>W1710860529
LMCY01000010
Betaproteobacteria
Massilia sp. Root335 [LMCY]
171
246
+
Trp
CCA
[ENA]
¡û
>W1710861051
LMDJ01000010
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
207
282
+
Trp
CCA
[ENA]
¡û
>W1710862028
LMEC01000003
Betaproteobacteria
Massilia sp. Root418 [LMEC]
96925
96850
-
Trp
CCA
[ENA]
¡û
>W1710863125
LMEW01000013
Betaproteobacteria
Massilia sp. Root133 [LMEW]
105746
105671
-
Trp
CCA
[ENA]
¡û
>W1710864590
LMFZ01000011
Betaproteobacteria
Duganella sp. Root1480D1 [LMFZ]
89174
89099
-
Trp
CCA
[ENA]
¡û
>W1710867233
LMIC01000014
Betaproteobacteria
Duganella sp. Root198D2 [LMIC]
179
254
+
Trp
CCA
[ENA]
¡û
>W1710871780
LMLM01000007
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
81566
81491
-
Trp
CCA
[ENA]
¡û
>W1710874728
LMNW01000001
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
856992
856917
-
Trp
CCA
[ENA]
¡û
>W1710893493
LNEU01000034
Betaproteobacteria
Burkholderiales bacterium Ga0077544 [LNEU]
16592
16517
-
Trp
CCA
[ENA]
¡û
>W1711046610
LROM01000060
Betaproteobacteria
Duganella phyllosphaerae [LROM]
180
255
+
Trp
CCA
[ENA]
¡û
>W131062301
ANJR01000031
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
105404
105329
-
Trp
CCA
[ENA]
¡û
>W131181065
ARNP01000126
Betaproteobacteria
Massilia niastensis DSM 21313 [ARNP]
201
276
+
Trp
CCA
[ENA]
¡û
>W1711430702
MIJG01000001
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
1052007
1051932
-
Trp
CCA
[ENA]
¡û
>W1712110288
NJGU01000022
Betaproteobacteria
Herbaspirillum robiniae HZ10 [NJGU]
20286
20211
-
Trp
CCA
[ENA]
¡û
>W1712110341
NJGV01000038
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
17707
17632
-
Trp
CCA
[ENA]
¡û
>C171085381
CP018845
Betaproteobacteria
Herbaspirillum robiniae AA6 [CP018845]
3438858
3438783
-
Trp
CCA
-
¡û
>C171088485
CP019038
Betaproteobacteria
Massilia putida 6NM-7 [CP019038]
4334649
4334724
+
Trp
CCA
-
¡û
>C171130508
LT671418
Betaproteobacteria
Herminiimonas arsenitoxidans AS8 [LT671418]
2758601
2758676
+
Trp
CCA
-
¡û
>W131176167
ARJV01000020
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [ARJV]
247048
246973
-
Trp
CCA
[ENA]
¡û
>C010372
CU207211
Betaproteobacteria
Herminiimonas arsenicoxydans [CU207211]
3136710
3136635
-
Trp
CCA
[Ensembl]
¡û
>C011136
CP000269
Betaproteobacteria
Janthinobacterium sp. Marseille [CP000269]
3802242
3802167
-
Trp
CCA
[Ensembl]
¡û
>WENV180033838
FTKL01461323
[FTKL] metagenome; soil
106
181
+
Trp
CCA
[ENA]
¡û
>WENV180038777
LLBY010005210
[LLBY] soil metagenome; soil from tomato rhizosphere
118
193
+
Trp
CCA
[ENA]
¡û
>WENV180041192
LLBZ010061927
[LLBZ] soil metagenome; soil from tomato rhizosphere
1433
1358
-
Trp
CCA
[ENA]
¡û
>W141003849
AEEC02000057
Betaproteobacteria
Herbaspirillum frisingense GSF30 [AEEC]
20287
20212
-
Trp
CCA
[ENA]
¡û
>WENV180308826
OBJR01235641
[OBJR] soil metagenome; soil
232
307
+
Trp
CCA
[ENA]
¡û
>WENV180344933
OBLL01355766
[OBLL] soil metagenome; soil
26
101
+
Trp
CCA
[ENA]
¡û
>WENV181162372
OEIN01101087
[OEIN] soil metagenome; soil
94
169
+
Trp
CCA
[ENA]
¡û
>WENV181164641
OEIR01275373
[OEIR] soil metagenome; soil
112
187
+
Trp
CCA
[ENA]
¡û
>WENV181168679
OEIU01641704
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
141
66
-
Trp
CCA
[ENA]
¡û
>WENV181385682
OFRJ01006857
[OFRJ] marine metagenome; seawater
636
711
+
Trp
CCA
[ENA]
¡û
>WENV181836155
OGVJ01001270
[OGVJ] freshwater metagenome; freshwater
955
880
-
Trp
CCA
[ENA]
¡û
>WENV181836850
OGVJ01040420
[OGVJ] freshwater metagenome; freshwater
333
258
-
Trp
CCA
[ENA]
¡û
>WENV181838472
OGVN01000837
[OGVN] freshwater metagenome; freshwater
3457
3382
-
Trp
CCA
[ENA]
¡û
>WENV181843122
OGVU01000944
[OGVU] freshwater metagenome; freshwater
314
239
-
Trp
CCA
[ENA]
¡û
>WENV181850788
OGWE01000142
[OGWE] freshwater metagenome; freshwater
3198
3123
-
Trp
CCA
[ENA]
¡û
>WENV181857456
OGWO01006915
[OGWO] freshwater metagenome; freshwater
285
210
-
Trp
CCA
[ENA]
¡û
>W141188699
AYMW01000001
Betaproteobacteria
Betaproteobacteria bacterium MOLA814 [AYMW]
1089157
1089082
-
Trp
CCA
[ENA]
¡û
>W141223409
BADF01000471
Betaproteobacteria
Herbaspirillum sp. B39 [BADF]
2817
2742
-
Trp
CCA
[ENA]
¡û
>WENV183620987
OOFT01001442
[OOFT] marine metagenome; sea ice
1753
1828
+
Trp
CCA
[ENA]
¡û
>WENV183676341
ORJL011612246
[ORJL] groundwater metagenome; groundwater
97
172
+
Trp
CCA
[ENA]
¡û
>WENV183744260
PJUK01003706
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
196
271
+
Trp
CCA
[ENA]
¡û
>WENV170153384
CEOF01086594
[CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
210
135
-
Trp
CCA
[ENA]
¡û
>WENV170201198
CEPQ01001992
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
16388
16313
-
Trp
CCA
[ENA]
¡û
>WENV170559803
CXWL01152258
[CXWL] groundwater metagenome; biofilm material
1512
1437
-
Trp
CCA
[ENA]
¡û
>WENV170619730
FUWD013020172
[FUWD] metagenome; unknown
329
404
+
Trp
CCA
[ENA]
¡û
>WENV170621054
FUWD013047708
[FUWD] metagenome; unknown
2030
2105
+
Trp
CCA
[ENA]
¡û
>WENV170627852
FUWD013238495
[FUWD] metagenome; unknown
329
404
+
Trp
CCA
[ENA]
¡û
>WENV170629219
FUWD013264513
[FUWD] metagenome; unknown
2030
2105
+
Trp
CCA
[ENA]
¡û
>WENV170711832
LNFM01007670
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
167
242
+
Trp
CCA
[ENA]
¡û
>C181187745
CP030092
Betaproteobacteria
Massilia sp. YMA4 [CP030092]
5208606
5208681
+
Trp
CCA
-
¡û
>C191124225
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
116410
116485
+
Trp
CCA
-
¡û
>C191150814
CP036401
Betaproteobacteria
Pseudoduganella albidiflava DSM 17472 [CP036401]
6538238
6538163
-
Trp
CCA
-
¡û
>C191156613
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
150880
150955
+
Trp
CCA
-
¡û
>C191173970
CP040017
Betaproteobacteria
Pseudoduganella umbonata DSMZ 26121 [CP040017]
5335345
5335420
+
Trp
CCA
-
¡û
>W1910578325
JWJC01000039
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
16815
16740
-
Trp
CCA
[ENA]
¡û
>W1910700094
MESE01000095
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
310
385
+
Trp
CCA
[ENA]
¡û
>W1910942170
NJGG01000001
Betaproteobacteria
Polynucleobacter cosmopolitanus MWH-MoIso2 [NJGG]
446964
447039
+
Trp
CCA
[ENA]
¡û
>W1911636086
PVTV01000012
Betaproteobacteria
beta proteobacterium MWH-P2sevCIIIb [PVTV]
142733
142808
+
Trp
CCA
[ENA]
¡û
>W1911647626
QAJP01000013
Betaproteobacteria
Herminiimonas sp. KBW02 [QAJP]
182
257
+
Trp
CCA
[ENA]
¡û
>W1810297202
PTLZ01000001
Betaproteobacteria
Herminiimonas fonticola S-94 [PTLZ]
423259
423334
+
Trp
CCA
[ENA]
¡û
>W1810486589
QAXZ01000002
Betaproteobacteria
Massilia sp. GV045 [QAXZ]
722920
722995
+
Trp
CCA
[ENA]
¡û
>W1810487093
QAYI01000002
Betaproteobacteria
Massilia sp. GV016 [QAYI]
728900
728975
+
Trp
CCA
[ENA]
¡û
>W1810672458
QJTL01000002
Betaproteobacteria
Duganella sp. GV083 [QJTL]
761523
761598
+
Trp
CCA
[ENA]
¡û
>W1810672580
QJTN01000002
Betaproteobacteria
Massilia sp. GV024 [QJTN]
729095
729170
+
Trp
CCA
[ENA]
¡û
>W1810677166
QKMN01000002
Betaproteobacteria
Duganella sp. GV053 [QKMN]
761523
761598
+
Trp
CCA
[ENA]
¡û
>W1810693402
QLLJ01000002
Betaproteobacteria
Duganella sp. GV066 [QLLJ]
761523
761598
+
Trp
CCA
[ENA]
¡û
>W1810694364
QLLZ01000002
Betaproteobacteria
Duganella sp. GV039 [QLLZ]
761523
761598
+
Trp
CCA
[ENA]
¡û
>W1810787970
QREC01000002
Betaproteobacteria
Duganella sp. GV023 [QREC]
449028
448953
-
Trp
CCA
[ENA]
¡û
>W1810885060
QUNB01000002
Betaproteobacteria
Duganella sp. GV032 [QUNB]
761913
761988
+
Trp
CCA
[ENA]
¡û
>W1810885179
QUND01000002
Betaproteobacteria
Duganella sp. GV046 [QUND]
761913
761988
+
Trp
CCA
[ENA]
¡û
>W1810885813
QUNP01000002
Betaproteobacteria
Duganella sp. GV038 [QUNP]
761913
761988
+
Trp
CCA
[ENA]
¡û
>W1810886070
QUNU01000003
Betaproteobacteria
Duganella sp. GV067 [QUNU]
241496
241571
+
Trp
CCA
[ENA]
¡û
>W2010598646
JABFMQ010000041
Betaproteobacteria
Herbaspirillum sp. C9C3 [JABFMQ]
199
274
+
Trp
CCA
[ENA]
¡û
>W2010598790
JABFMT010000050
Betaproteobacteria
Herbaspirillum robiniae C6C2 [JABFMT]
20223
20148
-
Trp
CCA
[ENA]
¡û
>W2010609468
JABMJK010000003
Betaproteobacteria
Duganella sp. SG902 [JABMJK]
522753
522678
-
Trp
CCA
[ENA]
¡û
>W2010641293
JABWEB010000001
Betaproteobacteria
Massilia sp. BJB1822 [JABWEB]
820636
820711
+
Trp
CCA
[ENA]
¡û
>W2010667431
JACBYS010000010
Betaproteobacteria
Duganella sp. 1224 [JACBYS]
392
467
+
Trp
CCA
[ENA]
¡û
>W2010696440
JACHCU010000007
Betaproteobacteria
Herbaspirillum sp. SJZ102 [JACHCU]
68893
68818
-
Trp
CCA
[ENA]
¡û
>W2010716126
JACHXD010000022
Betaproteobacteria
Massilia violacea CECT 8897 [JACHXD]
84281
84206
-
Trp
CCA
[ENA]
¡û
>W2010717024
JACHXS010000019
Betaproteobacteria
Massilia umbonata CECT 7753 [JACHXS]
202
277
+
Trp
CCA
[ENA]
¡û
>W2010717606
JACHYE010000021
Betaproteobacteria
Herbaspirillum sp. Sphag64 [JACHYE]
174
249
+
Trp
CCA
[ENA]
¡û
>W2010762116
JUGD01000042
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
155
230
+
Trp
CCA
[ENA]
¡û
>W2010762392
JWJC01000039
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
16815
16740
-
Trp
CCA
[ENA]
¡û
>W2010762645
JWZY01000034
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os49 [JWZY]
264
339
+
Trp
CCA
[ENA]
¡û
>W2010833520
MESE01000095
Betaproteobacteria
Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 [MESE]
310
385
+
Trp
CCA
[ENA]
¡û
>W2010984993
NJGG01000001
Betaproteobacteria
Polynucleobacter cosmopolitanus MWH-MoIso2 [NJGG]
446964
447039
+
Trp
CCA
[ENA]
¡û
>W2011229825
PVTV01000012
Betaproteobacteria
beta proteobacterium MWH-P2sevCIIIb [PVTV]
142733
142808
+
Trp
CCA
[ENA]
¡û
>W2011235610
QAJP01000013
Betaproteobacteria
Herminiimonas sp. KBW02 [QAJP]
182
257
+
Trp
CCA
[ENA]
¡û
>W2011375780
RBLK01000004
Betaproteobacteria
Herbaspirillum sp. XFZ15 10_5 [RBLK]
20261
20186
-
Trp
CCA
[ENA]
¡û
>W2011404562
RCWV01000002
Betaproteobacteria
Duganella sp. GV089 [RCWV]
761523
761598
+
Trp
CCA
[ENA]
¡û
>W2011578424
SGXH01000002
Betaproteobacteria
Duganella sp. BK701 [SGXH]
683985
684060
+
Trp
CCA
[ENA]
¡û
>W2011624575
SLYL01000002
Betaproteobacteria
Massilia sp. GV090 [SLYL]
190058
189983
-
Trp
CCA
[ENA]
¡û
>W2011629861
SMBW01000002
Betaproteobacteria
Massilia sp. GV097 [SMBW]
722701
722776
+
Trp
CCA
[ENA]
¡û
>W2011647591
SNWF01000004
Betaproteobacteria
Herminiimonas fonticola DSM 18555 [SNWF]
423227
423302
+
Trp
CCA
[ENA]
¡û
>W2011676277
SPVF01000072
Betaproteobacteria
Massilia sp. MC02 [SPVF]
33177
33102
-
Trp
CCA
[ENA]
¡û
>W2011676325
SPVG01000089
Betaproteobacteria
Duganella sp. DN04 [SPVG]
12339
12264
-
Trp
CCA
[ENA]
¡û
>W2012018778
VFNI01000007
Betaproteobacteria
Herbaspirillum sp. SJZ106 [VFNI]
130394
130469
+
Trp
CCA
[ENA]
¡û
>W2012048191
VIWG01000018
Betaproteobacteria
Herbaspirillum huttiense 1147 [VIWG]
20237
20162
-
Trp
CCA
[ENA]
¡û
>W2012082341
VLLB01000016
Betaproteobacteria
Massilia lurida CGMCC 1.10822 [VLLB]
56800
56725
-
Trp
CCA
[ENA]
¡û
>W2012089072
VMEK01000006
Betaproteobacteria
Zoogloea ramigera ATCC 19544 [VMEK]
108601
108676
+
Trp
CCA
[ENA]
¡û
>W2012135934
VSWE01000012
Betaproteobacteria
Herbaspirillum sp. CAH-3 [VSWE]
72534
72459
-
Trp
CCA
[ENA]
¡û
>SRA1052533
SRR035098.221459
454 Sequencing (SRP001819)
207
282
+
Trp
CCA
[SRA]
>W2012325794
WHIV01000004
Betaproteobacteria
Duganella sp. FT27W [WHIV]
458409
458334
-
Trp
CCA
[ENA]
¡û
>W2012357483
WKJL01000041
Betaproteobacteria
Duganella rivus FT26W [WKJL]
35394
35319
-
Trp
CCA
[ENA]
¡û
>W2012357496
WKJM01000002
Betaproteobacteria
Duganella aquatilis FT25W [WKJM]
35664
35589
-
Trp
CCA
[ENA]
¡û
>W2012357623
WKJN01000041
Betaproteobacteria
Duganella albus FT9W [WKJN]
35582
35507
-
Trp
CCA
[ENA]
¡û
>W2012399122
WNKX01000002
Betaproteobacteria
Pseudoduganella eburnea JCM 31587 [WNKX]
319452
319377
-
Trp
CCA
[ENA]
¡û
>W2012399213
WNKY01000020
Betaproteobacteria
Duganella radicis KCTC 22382 [WNKY]
103355
103280
-
Trp
CCA
[ENA]
¡û
>W2012399282
WNKZ01000028
Betaproteobacteria
Massilia buxea KCTC 52429 [WNKZ]
59633
59558
-
Trp
CCA
[ENA]
¡û
>W2012469398
WWCK01000006
Betaproteobacteria
Duganella sp. FT9W FT55W [WWCK]
159690
159615
-
Trp
CCA
[ENA]
¡û
>W2012469566
WWCN01000001
Betaproteobacteria
Duganella sp. FT135W [WWCN]
437781
437706
-
Trp
CCA
[ENA]
¡û
>W2012469696
WWCO01000020
Betaproteobacteria
Duganella sp. FT94W [WWCO]
517
592
+
Trp
CCA
[ENA]
¡û
>W2012469762
WWCP01000023
Betaproteobacteria
Duganella sp. FT50W [WWCP]
214
289
+
Trp
CCA
[ENA]
¡û
>W2012469823
WWCQ01000002
Betaproteobacteria
Duganella sp. CY15W [WWCQ]
444383
444308
-
Trp
CCA
[ENA]
¡û
>W2012469914
WWCR01000026
Betaproteobacteria
Duganella sp. FT134W [WWCR]
73735
73660
-
Trp
CCA
[ENA]
¡û
>W2012469957
WWCS01000008
Betaproteobacteria
Duganella pernnla FT109W [WWCS]
9268
9343
+
Trp
CCA
[ENA]
¡û
>W2012470039
WWCT01000010
Betaproteobacteria
Duganella levis CY42W [WWCT]
131328
131253
-
Trp
CCA
[ENA]
¡û
>W2012470098
WWCU01000005
Betaproteobacteria
Massilia aquatica FT127W [WWCU]
219306
219231
-
Trp
CCA
[ENA]
¡û
>W2110028782
BMKG01000027
Betaproteobacteria
Massilia buxea CGMCC 1.15931 [BMKG]
157
232
+
Trp
CCA
[ENA]
¡û
>W2110097053
CAJEVT010000001
Betaproteobacteria
Herminiimonas sp. Marseille-P9896 [CAJEVT]
514976
515051
+
Trp
CCA
[ENA]
¡û
>W2110111921
CAJHOC010000008
Betaproteobacteria
Azospira oryzae PS [CAJHOC]
8045
8120
+
Trp
CCA
[ENA]
¡û
>W2110272293
JACVON010000003
Betaproteobacteria
Polynucleobacter sp. 30F-ANTBAC [JACVON]
15323
15248
-
Trp
CCA
[ENA]
¡û
>W2110272511
JACVOT010000001
Betaproteobacteria
Polynucleobacter sp. AM-26B4 [JACVOT]
825724
825649
-
Trp
CCA
[ENA]
¡û
>W2110289233
JACYOX010000017
Betaproteobacteria
Noviherbaspirillum soli SUEMI10 [JACYOX]
1246
1321
+
Trp
CCA
[ENA]
¡û
>W2110331070
JADKYX010000009
Betaproteobacteria
Massilia rhizosphaerae NEAU-GH312 [JADKYX]
147301
147226
-
Trp
CCA
[ENA]
¡û
>W2110360987
JADOEL010000008
Betaproteobacteria
Herminiimonas contaminans Marseille-Q4544 [JADOEL]
44640
44715
+
Trp
CCA
[ENA]
¡û
>W2110392205
JADWMY010000012
Betaproteobacteria
Herbaspirillum sp. AP02 [JADWMY]
68265
68190
-
Trp
CCA
[ENA]
¡û
>W2110426281
JAELUH010000086
Betaproteobacteria
Herbaspirillum sp. ASV7 [JAELUH]
20193
20118
-
Trp
CCA
[ENA]
¡û
>W2110500271
JAFICQ010000007
Betaproteobacteria
Herbaspirillum sp. 1130 [JAFICQ]
201689
201764
+
Trp
CCA
[ENA]
¡û
>W2110555418
JAGIPZ010000006
Betaproteobacteria
Herbaspirillum sp. LeCh32-8 [JAGIPZ]
231877
231952
+
Trp
CCA
[ENA]
¡û
>W2110649326
JAHUWK010000015
Betaproteobacteria
Duganella sp. sic0402 [JAHUWK]
110944
110869
-
Trp
CCA
[ENA]
¡û
>C211144848
CP061294
Betaproteobacteria
Polynucleobacter sp. MWH-Spelu-300-X4 [CP061294]
42605
42680
+
Trp
CCA
-
¡û
>C211145032
CP061299
Betaproteobacteria
Polynucleobacter sp. MWH-CaK5 [CP061299]
41844
41919
+
Trp
CCA
-
¡û
>C231064931
CP053748
Betaproteobacteria
Massilia sp. erpn [CP053748]
1347225
1347150
-
Trp
CCA
-
¡û
>C231181867
CP083589
Betaproteobacteria
Herbaspirillum frisingense AU14559 [CP083589]
95793
95868
+
Trp
CCA
-
¡û
>C231227178
CP086370
Betaproteobacteria
Massilia sp. HC52 [CP086370]
822056
822131
+
Trp
CCA
-
¡û
>C231254099
CP088952
Betaproteobacteria
Massilia sp. DM-R-R2A-13 [CP088952]
4423289
4423214
-
Trp
CCA
-
¡û
>C231617195
CP119083
Betaproteobacteria
Telluria chitinolytica ACM 3522 [CP119083]
5352459
5352534
+
Trp
CCA
-
¡û
>C241016479
CP008956
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [CP008956]
170568
170643
+
Trp
CCA
-
¡û
>C241151527
CP051684
Betaproteobacteria
Duganella dendranthematis AF9R3 [CP051684]
2782984
2783059
+
Trp
CCA
-
¡û
>C241312838
CP133777
Betaproteobacteria
Actimicrobium sp. CCC2.4 [CP133777]
152074
151999
-
Trp
CCA
-
¡û
>C241354699
CP140152
Betaproteobacteria
Duganella zoogloeoides ATCC 25935 [CP140152]
5626389
5626314
-
Trp
CCA
-
¡û
>C10107796
CP002039
Betaproteobacteria
Herbaspirillum seropedicae SmR1 [CP002039]
111690
111765
+
Trp
CCA
[Ensembl]
¡û
>W11143216
AEPR01000342
Betaproteobacteria
Oxalobacteraceae bacterium IMCC9480 [AEPR]
3231
3156
-
Trp
CCA
[ENA]
¡û
>W1511683796
LFLS01000055
Betaproteobacteria
Herbaspirillum autotrophicum IAM 14942 [LFLS]
76
151
+
Trp
CCA
[ENA]
¡û
>W1511683847
LFLT01000059
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
16252
16177
-
Trp
CCA
[ENA]
¡û
>C161060433
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
129086
129161
+
Trp
CCA
[Ensembl]
¡û
>WENV064036
AACY023526572
Marine microbial communities from Global Ocean Sampling (GOS)
1668
1745
+
Trp
CCA
[ENA]
>W121068734
AJVC01000006
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
492527
492602
+
Trp
CCA
[ENA]
¡û
>W1610723397
LMDJ01000010
Betaproteobacteria
Massilia sp. Root351 [LMDJ]
207
282
+
Trp
CCA
[ENA]
¡û
>W1610724374
LMEC01000003
Betaproteobacteria
Massilia sp. Root418 [LMEC]
96925
96850
-
Trp
CCA
[ENA]
¡û
>W1610734126
LMLM01000007
Betaproteobacteria
Duganella sp. Leaf61 [LMLM]
81566
81491
-
Trp
CCA
[ENA]
¡û
>W1610737074
LMNW01000001
Betaproteobacteria
Duganella sp. Leaf126 [LMNW]
856992
856917
-
Trp
CCA
[ENA]
¡û
>W1610753759
LNEU01000034
Betaproteobacteria
Burkholderiales bacterium Ga0077544 [LNEU]
16592
16517
-
Trp
CCA
[ENA]
¡û
>W1710512870
FMZS01000019
Betaproteobacteria
Massilia sp. PDC64 [FMZS]
109737
109662
-
Trp
CCA
[ENA]
¡û
>W1710515886
FNCD01000016
Betaproteobacteria
Duganella sp. OV458 [FNCD]
685
760
+
Trp
CCA
[ENA]
¡û
>W1710519297
FNEQ01000004
Betaproteobacteria
Duganella sp. OV510 [FNEQ]
162924
162849
-
Trp
CCA
[ENA]
¡û
>W1710545176
FOBG01000006
Betaproteobacteria
Duganella sp. CF402 [FOBG]
99480
99405
-
Trp
CCA
[ENA]
¡û
>W1710578440
FPBO01000073
Betaproteobacteria
Pseudoduganella namucuonensis [FPBO]
14499
14424
-
Trp
CCA
[ENA]
¡û
>W1710593046
FRCX01000016
Betaproteobacteria
Duganella sacchari [FRCX]
584
659
+
Trp
CCA
[ENA]
¡û
>W1710610202
FYEX01000001
Betaproteobacteria
Polynucleobacter victoriensis MWH-VicM1 [FYEX]
842976
842901
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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