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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.315794 (8 seq.)
>WENV170573963
FLYL01053910
[FLYL] hot springs metagenome; Sediment
497
572
+
Asn
GTT
[ENA]
¢þ
>C181070255
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
1936388
1936463
+
Asn
GTT
-
¡û
>C181070265
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
4429622
4429547
-
Asn
GTT
-
¡û
>C181070282
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
4328894
4328819
-
Asn
GTT
-
¡û
>C181070293
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
4319451
4319376
-
Asn
GTT
-
¡û
>C181070319
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
3452503
3452428
-
Asn
GTT
-
¡û
>C181070370
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
2929220
2929145
-
Asn
GTT
-
¡û
>C181070382
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
2608160
2608085
-
Asn
GTT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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