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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.315795 (18 seq.)
>C171118984
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
1722441
1722516
+
Lys
TTT
-
¡û
>C171119004
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
1828910
1828985
+
Lys
TTT
-
¡û
>C171119014
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
1841610
1841685
+
Lys
TTT
-
¡û
>C171119028
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
1974369
1974444
+
Lys
TTT
-
¡û
>C171119038
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
2003602
2003677
+
Lys
TTT
-
¡û
>C171119049
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
2861206
2861281
+
Lys
TTT
-
¡û
>C171119064
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
3053418
3053493
+
Lys
TTT
-
¡û
>C171119072
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
3057894
3057969
+
Lys
TTT
-
¡û
>C171119078
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
3261637
3261712
+
Lys
TTT
-
¡û
>C171119093
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
3263197
3263272
+
Lys
TTT
-
¡û
>C171119102
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
3304545
3304620
+
Lys
TTT
-
¡û
>C171119103
CP021434
Bacillota
Tumebacillus avium AR23208 [CP021434]
3309812
3309887
+
Lys
TTT
-
¡û
>WENV170573960
FLYL01053910
[FLYL] hot springs metagenome; Sediment
144
219
+
Lys
TTT
[ENA]
¢þ
>C181070335
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
3330110
3330035
-
Lys
TTT
-
¡û
>C181070340
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
3149101
3149026
-
Lys
TTT
-
¡û
>C181070356
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
3147344
3147269
-
Lys
TTT
-
¡û
>C181070362
CP022657
Bacillota
Tumebacillus algifaecis THMBR28 [CP022657]
3119100
3119025
-
Lys
TTT
-
¡û
>W1511694660
LGCD01000005
Bacillota
Bacillus anthracis 3631_1C [LGCD]
507
582
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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