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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.316581 (235 seq.)
>W1710786200
LJIS01000118
Actinomycetota
Rhodococcus sp. ADH [LJIS]
120801
120726
-
Glu
CTC
[ENA]
¡û
>W1710863490
LMFE01000001
Actinomycetota
Nocardia sp. Root136 [LMFE]
1851696
1851771
+
Glu
CTC
[ENA]
¡û
>W1710863501
LMFE01000001
Actinomycetota
Nocardia sp. Root136 [LMFE]
1622837
1622762
-
Glu
CTC
[ENA]
¡û
>W1710879354
LMRP01000004
Actinomycetota
Rhodococcus sp. Leaf247 [LMRP]
518480
518555
+
Glu
CTC
[ENA]
¡û
>W1710879393
LMRQ01000014
Actinomycetota
Rhodococcus sp. Leaf258 [LMRQ]
56217
56142
-
Glu
CTC
[ENA]
¡û
>W1710879422
LMRR01000012
Actinomycetota
Rhodococcus sp. Leaf278 [LMRR]
202210
202285
+
Glu
CTC
[ENA]
¡û
>W1710909549
LNQO01000010
Actinomycetota
Gordonia sp. SGD-V-85 [LNQO]
109611
109536
-
Glu
CTC
[ENA]
¡û
>W1710935824
LOKT01000007
Actinomycetota
Nocardia donostiensis [LOKT]
151830
151903
+
Glu
CTC
[ENA]
¡û
>W1710995007
LPZO01000056
Actinomycetota
Rhodococcus kroppenstedtii [LPZO]
11022
10949
-
Glu
CTC
[ENA]
¡û
>W1711049729
LRQY01000041
Actinomycetota
Prescottella equi [LRQY]
4709
4634
-
Glu
CTC
[ENA]
¡û
>W1711049730
LRQY01000041
Actinomycetota
Prescottella equi [LRQY]
4566
4491
-
Glu
CTC
[ENA]
¡û
>W1711050098
LRRG01000186
Actinomycetota
Rhodococcus opacus [LRRG]
7918
7993
+
Glu
CTC
[ENA]
¡û
>W1711050221
LRRJ01000007
Actinomycetota
Rhodococcus qingshengii [LRRJ]
240303
240228
-
Glu
CTC
[ENA]
¡û
>W1711050369
LRRM01000001
Actinomycetota
Nocardia brasiliensis [LRRM]
395246
395171
-
Glu
CTC
[ENA]
¡û
>W1711091471
LTCZ01000197
Actinomycetota
Rhodococcus sp. LB1 [LTCZ]
13519
13444
-
Glu
CTC
[ENA]
¡û
>W1711138493
LVCW01000127
Actinomycetota
Rhodococcus sp. EPR-279 [LVCW]
26804
26729
-
Glu
CTC
[ENA]
¡û
>W1711179195
LWHK01000180
Actinomycetota
Rhodococcus sp. 1139 [LWHK]
97788
97863
+
Glu
CTC
[ENA]
¡û
>W1711179580
LWHT01000001
Actinomycetota
Prescottella equi [LWHT]
694956
694881
-
Glu
CTC
[ENA]
¡û
>W1711179742
LWHW01000002
Actinomycetota
Prescottella equi [LWHW]
445837
445762
-
Glu
CTC
[ENA]
¡û
>W1711179743
LWHW01000002
Actinomycetota
Prescottella equi [LWHW]
445694
445619
-
Glu
CTC
[ENA]
¡û
>W1711179937
LWIA01000001
Actinomycetota
Prescottella equi [LWIA]
477538
477613
+
Glu
CTC
[ENA]
¡û
>W1711179938
LWIA01000001
Actinomycetota
Prescottella equi [LWIA]
477681
477756
+
Glu
CTC
[ENA]
¡û
>W1711192318
LWTQ01000004
Actinomycetota
Prescottella equi [LWTQ]
377766
377691
-
Glu
CTC
[ENA]
¡û
>W1711192319
LWTQ01000004
Actinomycetota
Prescottella equi [LWTQ]
377622
377547
-
Glu
CTC
[ENA]
¡û
>W1711192356
LWTR01000006
Actinomycetota
Prescottella equi [LWTR]
32304
32229
-
Glu
CTC
[ENA]
¡û
>W1711192357
LWTR01000006
Actinomycetota
Prescottella equi [LWTR]
32161
32086
-
Glu
CTC
[ENA]
¡û
>W1711192450
LWTS01000011
Actinomycetota
Prescottella equi [LWTS]
166658
166583
-
Glu
CTC
[ENA]
¡û
>W1711192451
LWTS01000011
Actinomycetota
Prescottella equi [LWTS]
166515
166440
-
Glu
CTC
[ENA]
¡û
>W1711192470
LWTT01000002
Actinomycetota
Prescottella equi [LWTT]
166233
166158
-
Glu
CTC
[ENA]
¡û
>W1711192471
LWTT01000002
Actinomycetota
Prescottella equi [LWTT]
166090
166015
-
Glu
CTC
[ENA]
¡û
>W1711192510
LWTU01000003
Actinomycetota
Prescottella equi [LWTU]
95244
95319
+
Glu
CTC
[ENA]
¡û
>W1711192511
LWTU01000003
Actinomycetota
Prescottella equi [LWTU]
95387
95462
+
Glu
CTC
[ENA]
¡û
>W1711192564
LWTV01000001
Actinomycetota
Prescottella equi [LWTV]
633514
633439
-
Glu
CTC
[ENA]
¡û
>W1711192565
LWTV01000001
Actinomycetota
Prescottella equi [LWTV]
633371
633296
-
Glu
CTC
[ENA]
¡û
>W1711192660
LWTX01000001
Actinomycetota
Prescottella equi [LWTX]
507482
507557
+
Glu
CTC
[ENA]
¡û
>W1711192661
LWTX01000001
Actinomycetota
Prescottella equi [LWTX]
507625
507700
+
Glu
CTC
[ENA]
¡û
>W1711192717
LWTY01000001
Actinomycetota
Prescottella equi [LWTY]
689335
689260
-
Glu
CTC
[ENA]
¡û
>W1711192718
LWTY01000001
Actinomycetota
Prescottella equi [LWTY]
689192
689117
-
Glu
CTC
[ENA]
¡û
>W1711207287
LXFI01000001
Actinomycetota
Prescottella equi [LXFI]
632724
632649
-
Glu
CTC
[ENA]
¡û
>W1711207288
LXFI01000001
Actinomycetota
Prescottella equi [LXFI]
632580
632505
-
Glu
CTC
[ENA]
¡û
>W1711252858
LYPG01000115
Actinomycetota
Rhodococcus erythropolis [LYPG]
433717
433792
+
Glu
CTC
[ENA]
¡û
>W1711281910
LZMO01000188
Actinomycetota
Gordonia sp. 852002-10350_SCH5691597 [LZMO]
41600
41525
-
Glu
CTC
[ENA]
¡û
>W1711286531
LZTD01000117
Actinomycetota
Gordonia sp. 852002-50816_SCH5313054-a [LZTD]
8391
8316
-
Glu
CTC
[ENA]
¡û
>W1711492147
MKKD01000048
Actinomycetota
Rhodococcus sp. CUA-806 [MKKD]
301957
301882
-
Glu
CTC
[ENA]
¡û
>W1711518844
MLKO01000002
Actinomycetota
Rhodococcus erythropolis [MLKO]
509569
509644
+
Glu
CTC
[ENA]
¡û
>W1711666267
MRBQ01000019
Actinomycetota
Rhodococcus erythropolis [MRBQ]
4560
4485
-
Glu
CTC
[ENA]
¡û
>W1711739087
MUBO01000165
Actinomycetota
Streptomyces daghestanicus [MUBO]
77161
77088
-
Glu
CTC
[ENA]
¡û
>W1711750399
MUMY01000005
Actinomycetota
Nocardia donostiensis [MUMY]
152069
152142
+
Glu
CTC
[ENA]
¡û
>W1711766932
MUZB01000019
Actinomycetota
Rhodococcus sp. 66b [MUZB]
50761
50686
-
Glu
CTC
[ENA]
¡û
>W1711784519
MVPX01000302
Actinomycetota
Gordonia sp. i37 [MVPX]
16044
15971
-
Glu
CTC
[ENA]
¡û
>W1712061707
NGFO01000020
Actinomycetota
Gordonia lacunae [NGFO]
76643
76568
-
Glu
CTC
[ENA]
¡û
>C171060510
CP017299
Actinomycetota
Rhodococcus sp. YL-1 [CP017299]
2491464
2491539
+
Glu
CTC
-
¡û
>C171072540
CP018082
Actinomycetota
Nocardia mangyaensis Y48 [CP018082]
5192212
5192285
+
Glu
CTC
-
¡û
>C171072552
CP018082
Actinomycetota
Nocardia mangyaensis Y48 [CP018082]
4885942
4885867
-
Glu
CTC
-
¡û
>W131087797
AODN01000020
Actinomycetota
Rhodococcus qingshengii BKS 20-40 [AODN]
58233
58158
-
Glu
CTC
[ENA]
¡û
>W131087864
AODO01000030
Actinomycetota
Rhodococcus triatomae BKS 15-14 [AODO]
14130
14055
-
Glu
CTC
[ENA]
¡û
>W131087865
AODO01000030
Actinomycetota
Rhodococcus triatomae BKS 15-14 [AODO]
13988
13913
-
Glu
CTC
[ENA]
¡û
>W131109086
APHK01000280
Actinomycetota
Gordonia sp. NB41Y NB4-1Y [APHK]
208
135
-
Glu
CTC
[ENA]
¡û
>W131156541
AQPW01000003
Actinomycetota
Gordonia terrae C-6 [AQPW]
205497
205422
-
Glu
CTC
[ENA]
¡û
>W131185144
ARTM01000035
Actinomycetota
Nocardia sp. 348MFTsu5.1 [ARTM]
222654
222729
+
Glu
CTC
[ENA]
¡û
>W131186249
ARVZ01000001
Actinomycetota
Gordonia polyisoprenivorans HW436 [ARVZ]
1836618
1836691
+
Glu
CTC
[ENA]
¡û
>W131215932
ATVK01000041
Actinomycetota
Gordonia hirsuta DSM 44140 = NBRC 16056 [ATVK]
313
240
-
Glu
CTC
[ENA]
¡û
>W131239443
BANR01000008
Actinomycetota
Gordonia aichiensis NBRC 108223 [BANR]
90178
90253
+
Glu
CTC
[ENA]
¡û
>W131239468
BANS01000004
Actinomycetota
Gordonia amicalis NBRC 100051 [BANS]
21164
21237
+
Glu
CTC
[ENA]
¡û
>W131239517
BANT01000004
Actinomycetota
Gordonia hirsuta DSM 44140 = NBRC 16056 [BANT]
313
240
-
Glu
CTC
[ENA]
¡û
>W131239681
BANX01000002
Actinomycetota
Gordonia soli NBRC 108243 [BANX]
31355
31282
-
Glu
CTC
[ENA]
¡û
>W131240854
BAOP01000011
Actinomycetota
Gordonia malaquae NBRC 108250 [BAOP]
668
593
-
Glu
CTC
[ENA]
¡û
>W141000357
ACQP01000326
Actinomycetota
Kutzneria sp. 744 [ACQP]
61793
61866
+
Glu
CTC
[ENA]
¡û
>W141091854
AUZK01000009
Actinomycetota
Rhodococcus erythropolis DN1 [AUZK]
161301
161226
-
Glu
CTC
[ENA]
¡û
>W141168789
AXVF01000002
Actinomycetota
Rhodococcus sp. JG-3 [AXVF]
589351
589426
+
Glu
CTC
[ENA]
¡û
>W141170050
AXWW01000002
Actinomycetota
Actinokineospora inagensis DSM 44258 [AXWW]
282599
282526
-
Glu
CTC
[ENA]
¡û
>W141231423
BAUA01000076
Actinomycetota
Nocardia brasiliensis IFM 10847 [BAUA]
11381
11456
+
Glu
CTC
[ENA]
¡û
>W141233956
BAWF01000097
Actinomycetota
Rhodococcus wratislaviensis NBRC 100605 [BAWF]
207847
207922
+
Glu
CTC
[ENA]
¡û
>W141238674
BBLL01000197
Actinomycetota
Rhodococcus erythropolis [BBLL]
316494
316419
-
Glu
CTC
[ENA]
¡û
>W141278574
JAFQ01000004
Actinomycetota
Nocardia sp. BMG51109 [JAFQ]
2760264
2760337
+
Glu
CTC
[ENA]
¡û
>W141278588
JAFQ01000004
Actinomycetota
Nocardia sp. BMG51109 [JAFQ]
8456230
8456157
-
Glu
CTC
[ENA]
¡û
>WENV170300812
CESG01187474
[CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
519
594
+
Glu
CTC
[ENA]
¢þ
>WENV170566243
FKKE01011611
[FKKE] freshwater metagenome; freshwater
7637
7562
-
Glu
CTC
[ENA]
¢þ
>C181181631
CP029604
Actinomycetota
Gordonia terrae NRRL B-16283 [CP029604]
3697578
3697505
-
Glu
CTC
-
¡û
>C191005741
AP018920
Actinomycetota
Pseudonocardia autotrophica NBRC 12743 [AP018920]
5638630
5638555
-
Glu
CTC
-
¡û
>C191020796
CP022580
Actinomycetota
Gordonia rubripertincta CWB2 [CP022580]
3663896
3663823
-
Glu
CTC
-
¡û
>C191020797
CP022580
Actinomycetota
Gordonia rubripertincta CWB2 [CP022580]
3663722
3663649
-
Glu
CTC
-
¡û
>C191050794
CP027114
Actinomycetota
Gordonia alkanivorans YC-RL2 [CP027114]
2523970
2524043
+
Glu
CTC
-
¡û
>C191050795
CP027114
Actinomycetota
Gordonia alkanivorans YC-RL2 [CP027114]
2524145
2524218
+
Glu
CTC
-
¡û
>C191166019
CP039432
Actinomycetota
Rhodococcus sp. SGAir0479 [CP039432]
2517449
2517374
-
Glu
CTC
-
¡û
>C191166020
CP039432
Actinomycetota
Rhodococcus sp. SGAir0479 [CP039432]
2517310
2517237
-
Glu
CTC
-
¡û
>W141702526
JMLO01000001
Actinomycetota
Rhodococcus sp. UNC363MFTsu5.1 [JMLO]
107996
108071
+
Glu
CTC
[ENA]
¡û
>W141755718
JNWS01000018
Actinomycetota
Rhodococcus rhodochrous [JNWS]
101178
101103
-
Glu
CTC
[ENA]
¡û
>W141756194
JNXA01000003
Actinomycetota
Gordonia terrae [JNXA]
385200
385125
-
Glu
CTC
[ENA]
¡û
>W141758772
JNYV01000005
Actinomycetota
Kitasatospora arboriphila [JNYV]
262913
262838
-
Glu
CTC
[ENA]
¡û
>W141773417
JOIL01000003
Actinomycetota
Rhodococcus erythropolis [JOIL]
504754
504829
+
Glu
CTC
[ENA]
¡û
>W1910129233
BHYM01000037
Actinomycetota
Rhodococcus wratislaviensis C31-06 [BHYM]
51683
51756
+
Glu
CTC
[ENA]
¡û
>C141001820
CP003761
Actinomycetota
Rhodococcus erythropolis CCM2595 [CP003761]
2432493
2432568
+
Glu
CTC
[Ensembl]
¡û
>C09108717
AP008957
Actinomycetota
Rhodococcus erythropolis PR4 [AP008957]
2601746
2601821
+
Glu
CTC
[Ensembl]
¡û
>W1910637672
LQWU01000003
Actinomycetota
Rhodococcus erythropolis B7g [LQWU]
120324
120251
-
Glu
CTC
[ENA]
¡û
>W1910910532
NHBD01000003
Actinomycetota
Rhodococcus erythropolis AV96 [NHBD]
500511
500584
+
Glu
CTC
[ENA]
¡û
>W1911139634
NOYB01000032
Actinomycetota
Rhodococcus sp. 06-470-2 [NOYB]
573008
572935
-
Glu
CTC
[ENA]
¡û
>W1911139731
NOYD01000038
Actinomycetota
Rhodococcus sp. 06-462-5 [NOYD]
201106
201179
+
Glu
CTC
[ENA]
¡û
>W1911139752
NOYE01000012
Actinomycetota
Rhodococcus sp. 06-418-5 [NOYE]
200872
200945
+
Glu
CTC
[ENA]
¡û
>W1911139803
NOYF01000011
Actinomycetota
Rhodococcus sp. 06-418-1B [NOYF]
640527
640454
-
Glu
CTC
[ENA]
¡û
>W1911140026
NOYJ01000033
Actinomycetota
Rhodococcus sp. 06-221-2 [NOYJ]
246008
245935
-
Glu
CTC
[ENA]
¡û
>W1911140211
NOYN01000025
Actinomycetota
Rhodococcus sp. 06-156-3b [NOYN]
653107
653034
-
Glu
CTC
[ENA]
¡û
>W1911140421
NOYQ01000029
Actinomycetota
Rhodococcus sp. 06-1477-1A [NOYQ]
204107
204180
+
Glu
CTC
[ENA]
¡û
>W1911140735
NOYX01000048
Actinomycetota
Rhodococcus sp. 05-2256-B4 [NOYX]
248584
248511
-
Glu
CTC
[ENA]
¡û
>W1911140981
NOZC01000036
Actinomycetota
Rhodococcus sp. 05-2255-3B1 [NOZC]
686221
686148
-
Glu
CTC
[ENA]
¡û
>W1911141159
NOZG01000026
Actinomycetota
Rhodococcus sp. 05-2254-5 [NOZG]
216120
216193
+
Glu
CTC
[ENA]
¡û
>W1911141213
NOZH01000030
Actinomycetota
Rhodococcus sp. 05-2254-4 [NOZH]
772070
771997
-
Glu
CTC
[ENA]
¡û
>W1911141253
NOZI01000026
Actinomycetota
Rhodococcus sp. 05-2254-3 [NOZI]
342474
342401
-
Glu
CTC
[ENA]
¡û
>W1911141334
NOZK01000023
Actinomycetota
Rhodococcus sp. 05-2254-1 [NOZK]
216120
216193
+
Glu
CTC
[ENA]
¡û
>W1911141395
NOZL01000054
Actinomycetota
Rhodococcus sp. 05-2221-1B [NOZL]
202195
202122
-
Glu
CTC
[ENA]
¡û
>W1911141414
NOZM01000004
Actinomycetota
Rhodococcus sp. 02-925g [NOZM]
722513
722440
-
Glu
CTC
[ENA]
¡û
>W1911141539
NOZO01000022
Actinomycetota
Rhodococcus fascians A2 [NOZO]
309997
309924
-
Glu
CTC
[ENA]
¡û
>W1911149038
NPFL01000020
Actinomycetota
Rhodococcus sp. 15-725-2-2b [NPFL]
261424
261351
-
Glu
CTC
[ENA]
¡û
>W1911149181
NPFO01000018
Actinomycetota
Rhodococcus fascians 15-508-1b [NPFO]
309997
309924
-
Glu
CTC
[ENA]
¡û
>W1911149276
NPFQ01000037
Actinomycetota
Rhodococcus sp. 15-1189-1-1a [NPFQ]
536335
536262
-
Glu
CTC
[ENA]
¡û
>W1911149375
NPFS01000032
Actinomycetota
Rhodococcus sp. 14-2686-1-2 [NPFS]
203278
203205
-
Glu
CTC
[ENA]
¡û
>W1911149420
NPFT01000022
Actinomycetota
Rhodococcus fascians 14-2632-D2 [NPFT]
309561
309488
-
Glu
CTC
[ENA]
¡û
>W1911149616
NPFX01000023
Actinomycetota
Rhodococcus sp. 14-2483-1-1 [NPFX]
237094
237021
-
Glu
CTC
[ENA]
¡û
>W1911149713
NPFZ01000034
Actinomycetota
Rhodococcus sp. 14-2470-1a [NPFZ]
213991
213918
-
Glu
CTC
[ENA]
¡û
>W1911149786
NPGB01000018
Actinomycetota
Rhodococcus sp. 06-156-4 [NPGB]
642038
641965
-
Glu
CTC
[ENA]
¡û
>W1911155389
NPJZ01000001
Actinomycetota
Rhodococcus sp. OK302 [NPJZ]
3153321
3153394
+
Glu
CTC
[ENA]
¡û
>W1911239649
NSDY01000001
Actinomycetota
Rhodococcus sp. ACPA4 [NSDY]
316144
316217
+
Glu
CTC
[ENA]
¡û
>W1911239704
NSDZ01000001
Actinomycetota
Rhodococcus sp. ACS1 [NSDZ]
967293
967220
-
Glu
CTC
[ENA]
¡û
>W1911422478
NXEH01000009
Actinomycetota
Nocardia farcinica CNM20080921 [NXEH]
47652
47725
+
Glu
CTC
[ENA]
¡û
>W1911492059
OBDL01000019
Actinomycetota
Rhodococcus sp. OK270 [OBDL]
16212
16139
-
Glu
CTC
[ENA]
¡û
>W1911647271
QAJJ01000002
Actinomycetota
Rhodococcus sp. KBW08 [QAJJ]
252587
252514
-
Glu
CTC
[ENA]
¡û
>W1810189527
PKJC01000003
Actinomycetota
Gordonia terrae UMB0777 [PKJC]
94498
94571
+
Glu
CTC
[ENA]
¡û
>W1810295985
PTIX01000020
Actinomycetota
Actinokineospora auranticolor YU 961-1 [PTIX]
46663
46736
+
Glu
CTC
[ENA]
¡û
>W1810577758
QEOM01000001
Actinomycetota
Williamsia marianensis DSM 44944 [QEOM]
493415
493342
-
Glu
CTC
[ENA]
¡û
>W1810605750
QGNK01000012
Actinomycetota
Rhodococcus sp. Eu-32 [QGNK]
175255
175182
-
Glu
CTC
[ENA]
¡û
>W1810659635
QJKF01000005
Actinomycetota
Nocardia tenerifensis DSM 44704 [QJKF]
327277
327204
-
Glu
CTC
[ENA]
¡û
>W1810870072
QUAI01000001
Actinomycetota
Rhodococcus erythropolis ATCC 15903 [QUAI]
1806001
1805928
-
Glu
CTC
[ENA]
¡û
>W1810885260
QUNE01000004
Actinomycetota
Rhodococcus sp. OK551 [QUNE]
402899
402972
+
Glu
CTC
[ENA]
¡û
>C151005052
CP003949
Actinomycetota
Rhodococcus opacus PD630 [CP003949]
3363933
3364008
+
Glu
CTC
[Ensembl]
¡û
>C151017641
CP007155
Actinomycetota
Kutzneria albida DSM 43870 [CP007155]
8376458
8376385
-
Glu
CTC
[Ensembl]
¡û
>W1510091171
CEDU01000033
Actinomycetota
Rhodococcus globerulus 4J2A2 [CEDU]
470228
470153
-
Glu
CTC
[ENA]
¡û
>W10116549
ADNW01000022
Actinomycetota
Prescottella equi ATCC 33707 [ADNW]
16817
16742
-
Glu
CTC
[ENA]
¡û
>W10116550
ADNW01000022
Actinomycetota
Prescottella equi ATCC 33707 [ADNW]
16674
16599
-
Glu
CTC
[ENA]
¡û
>W1510649819
CVQP01000011
Actinomycetota
Rhodococcus sp. RD6.2 [CVQP]
99553
99628
+
Glu
CTC
[ENA]
¡û
>W1510649820
CVQP01000011
Actinomycetota
Rhodococcus sp. RD6.2 [CVQP]
99697
99772
+
Glu
CTC
[ENA]
¡û
>W1511186096
JMEO01000039
Actinomycetota
Rhodococcus fascians LMG 3616 [JMEO]
339898
339973
+
Glu
CTC
[ENA]
¡û
>W1511186139
JMEP01000022
Actinomycetota
Rhodococcus fascians LMG 3605 [JMEP]
669353
669428
+
Glu
CTC
[ENA]
¡û
>W1511186181
JMEQ01000020
Actinomycetota
Rhodococcus fascians LMG 3602 [JMEQ]
261630
261705
+
Glu
CTC
[ENA]
¡û
>W1511186401
JMEV01000004
Actinomycetota
Rhodococcus fascians A76 [JMEV]
700577
700502
-
Glu
CTC
[ENA]
¡û
>W1511186452
JMEW01000014
Actinomycetota
Rhodococcus fascians A73a [JMEW]
631333
631260
-
Glu
CTC
[ENA]
¡û
>W1511186699
JMFB01000029
Actinomycetota
Rhodococcus fascians 05-561-1 [JMFB]
200895
200970
+
Glu
CTC
[ENA]
¡û
>W1511186746
JMFC01000021
Actinomycetota
Rhodococcus fascians 05-339-1 [JMFC]
592132
592207
+
Glu
CTC
[ENA]
¡û
>W1511186873
JMFF01000023
Actinomycetota
Rhodococcus fascians 02-815 [JMFF]
499541
499468
-
Glu
CTC
[ENA]
¡û
>W11121220
ADNW02000013
Actinomycetota
Prescottella equi ATCC 33707 [ADNW]
638830
638905
+
Glu
CTC
[ENA]
¡û
>W11121221
ADNW02000013
Actinomycetota
Prescottella equi ATCC 33707 [ADNW]
638973
639048
+
Glu
CTC
[ENA]
¡û
>W1511535415
JYOP01000002
Actinomycetota
Rhodococcus sp. AD45 [JYOP]
380998
381073
+
Glu
CTC
[ENA]
¡û
>W1511543374
JZIS01000027
Actinomycetota
Rhodococcus sp. PML026 [JZIS]
450822
450747
-
Glu
CTC
[ENA]
¡û
>W11148961
AEUD01000001
Actinomycetota
Gordonia neofelifaecis NRRL B-59395 [AEUD]
258818
258893
+
Glu
CTC
[ENA]
¡û
>W1511639807
LDPN01000097
Actinomycetota
Rhodococcus erythropolis CAS922i [LDPN]
56023
56098
+
Glu
CTC
[ENA]
¡û
>W1511678802
LFDS01000003
Actinomycetota
Rhodococcus fascians F7 [LFDS]
43467
43542
+
Glu
CTC
[ENA]
¡û
>W11177979
AGCF01000002
Actinomycetota
Rhodococcus erythropolis XP [AGCF]
661703
661778
+
Glu
CTC
[ENA]
¡û
>C161005724
CP007255
Actinomycetota
Rhodococcus erythropolis R138 [CP007255]
4447581
4447506
-
Glu
CTC
[Ensembl]
¡û
>C161037627
CP011853
Actinomycetota
Gordonia phthalatica QH-11 [CP011853]
3024201
3024126
-
Glu
CTC
[Ensembl]
¡û
>C161084577
CP015219
Actinomycetota
Rhodococcus sp. PBTS 1 [CP015219]
1425159
1425232
+
Glu
CTC
[Ensembl]
¡û
>C161085306
CP015235
Actinomycetota
Rhodococcus fascians D188 [CP015235]
4990463
4990388
-
Glu
CTC
[Ensembl]
¡û
>W121020603
AGVD01000036
Actinomycetota
Rhodococcus opacus PD630 [AGVD]
6870
6945
+
Glu
CTC
[ENA]
¡û
>W121062329
AJJH01000039
Actinomycetota
Rhodococcus opacus RKJ300 [AJJH]
120236
120311
+
Glu
CTC
[ENA]
¡û
>W121071598
AJYC01000015
Actinomycetota
Rhodococcus opacus M213 [AJYC]
7016
7091
+
Glu
CTC
[ENA]
¡û
>W121086889
AKKP01000114
Actinomycetota
Rhodococcus sp. JVH1 [AKKP]
23930
24005
+
Glu
CTC
[ENA]
¡û
>W121123633
BAED01000009
Actinomycetota
Gordonia amarae NBRC 15530 [BAED]
22917
22842
-
Glu
CTC
[ENA]
¡û
>W121123901
BAEI01000066
Actinomycetota
Gordonia polyisoprenivorans NBRC 16320 [BAEI]
38398
38471
+
Glu
CTC
[ENA]
¡û
>W121124282
BAFB01000121
Actinomycetota
Gordonia otitidis NBRC 100426 [BAFB]
17927
18002
+
Glu
CTC
[ENA]
¡û
>W121125087
BAFT01000063
Actinomycetota
Nocardia brasiliensis NBRC 14402 [BAFT]
105582
105507
-
Glu
CTC
[ENA]
¡û
>W121125766
BAGG01000093
Actinomycetota
Nocardia takedensis NBRC 100417 [BAGG]
69507
69434
-
Glu
CTC
[ENA]
¡û
>W121126600
BAHC01000177
Actinomycetota
Gordonia rhizosphera NBRC 16068 [BAHC]
1453
1380
-
Glu
CTC
[ENA]
¡û
>W121126675
BAHE01000009
Actinomycetota
Gordonia namibiensis NBRC 108229 [BAHE]
104761
104834
+
Glu
CTC
[ENA]
¡û
>W121126676
BAHE01000009
Actinomycetota
Gordonia namibiensis NBRC 108229 [BAHE]
104937
105010
+
Glu
CTC
[ENA]
¡û
>W1610050153
BBFO01000458
Actinomycetota
Rhodococcus opacus RKJ300 = JCM 13270 [BBFO]
3025
3100
+
Glu
CTC
[ENA]
¡û
>W1610050555
BBFZ01000452
Actinomycetota
Rhodococcus sp. JCM 3009 [BBFZ]
2926
3001
+
Glu
CTC
[ENA]
¡û
>W1610050726
BBGD01001428
Actinomycetota
Gordonia polyisoprenivorans NBRC 16320 = JCM 10675 [BBGD]
869
796
-
Glu
CTC
[ENA]
¡û
>W1610068562
BCRL01000001
Actinomycetota
Prescottella equi NBRC 101255 = C 7 [BCRL]
16521
16446
-
Glu
CTC
[ENA]
¡û
>W1610068563
BCRL01000001
Actinomycetota
Prescottella equi NBRC 101255 = C 7 [BCRL]
16378
16303
-
Glu
CTC
[ENA]
¡û
>W1610073966
BCWH01000003
Actinomycetota
Rhodococcus sp. YH3-3 [BCWH]
287114
287189
+
Glu
CTC
[ENA]
¡û
>W1610078563
BDAZ01000017
Actinomycetota
Nocardia anaemiae NBRC 100462 [BDAZ]
55969
55894
-
Glu
CTC
[ENA]
¡û
>W1610078752
BDBD01000005
Actinomycetota
Nocardia coubleae NBRC 108252 [BDBD]
65047
64972
-
Glu
CTC
[ENA]
¡û
>W1610078753
BDBD01000007
Actinomycetota
Nocardia coubleae NBRC 108252 [BDBD]
74466
74539
+
Glu
CTC
[ENA]
¡û
>W1610078991
BDBH01000012
Actinomycetota
Nocardia harenae NBRC 108248 [BDBH]
166085
166158
+
Glu
CTC
[ENA]
¡û
>W1610079234
BDBM01000009
Actinomycetota
Nocardia gamkensis NBRC 108242 [BDBM]
126319
126246
-
Glu
CTC
[ENA]
¡û
>W1610082677
BDGK01000019
Actinomycetota
Rhodococcus sp. Br-6 [BDGK]
709969
709894
-
Glu
CTC
[ENA]
¡û
>W1610082678
BDGK01000019
Actinomycetota
Rhodococcus sp. Br-6 [BDGK]
709826
709751
-
Glu
CTC
[ENA]
¡û
>C131008860
CP003876
Actinomycetota
Nocardia brasiliensis ATCC 700358 HUJEG-1 [CP003876]
7172980
7172905
-
Glu
CTC
[Ensembl]
¡û
>W1610527628
JPYZ01000008
Actinomycetota
Gordonia sp. QH-12 [JPYZ]
50121
50048
-
Glu
CTC
[ENA]
¡û
>W1610638762
LIYC01000010
Actinomycetota
Gordonia sp. HS-NH1 [LIYC]
116852
116777
-
Glu
CTC
[ENA]
¡û
>W1610650006
LJIS01000118
Actinomycetota
Rhodococcus sp. ADH [LJIS]
120801
120726
-
Glu
CTC
[ENA]
¡û
>W1610725836
LMFE01000001
Actinomycetota
Nocardia sp. Root136 [LMFE]
1851696
1851771
+
Glu
CTC
[ENA]
¡û
>W1610725847
LMFE01000001
Actinomycetota
Nocardia sp. Root136 [LMFE]
1622837
1622762
-
Glu
CTC
[ENA]
¡û
>W1610741700
LMRP01000004
Actinomycetota
Rhodococcus sp. Leaf247 [LMRP]
518480
518555
+
Glu
CTC
[ENA]
¡û
>W1610741739
LMRQ01000014
Actinomycetota
Rhodococcus sp. Leaf258 [LMRQ]
56217
56142
-
Glu
CTC
[ENA]
¡û
>W1610741768
LMRR01000012
Actinomycetota
Rhodococcus sp. Leaf278 [LMRR]
202210
202285
+
Glu
CTC
[ENA]
¡û
>W1610767908
LNQO01000010
Actinomycetota
Gordonia sp. SGD-V-85 [LNQO]
109611
109536
-
Glu
CTC
[ENA]
¡û
>W1610849561
LPZM01000045
Actinomycetota
Rhodococcus sp. AJR001 [LPZM]
122663
122588
-
Glu
CTC
[ENA]
¡û
>W1610849664
LPZO01000056
Actinomycetota
Rhodococcus kroppenstedtii [LPZO]
11022
10949
-
Glu
CTC
[ENA]
¡û
>W1610890858
LRQY01000041
Actinomycetota
Prescottella equi [LRQY]
4709
4634
-
Glu
CTC
[ENA]
¡û
>W1610890859
LRQY01000041
Actinomycetota
Prescottella equi [LRQY]
4566
4491
-
Glu
CTC
[ENA]
¡û
>W1610891227
LRRG01000186
Actinomycetota
Rhodococcus opacus [LRRG]
7918
7993
+
Glu
CTC
[ENA]
¡û
>W1610891350
LRRJ01000007
Actinomycetota
Rhodococcus qingshengii [LRRJ]
240303
240228
-
Glu
CTC
[ENA]
¡û
>W1610891498
LRRM01000001
Actinomycetota
Nocardia brasiliensis [LRRM]
395246
395171
-
Glu
CTC
[ENA]
¡û
>W1610925615
LTCZ01000197
Actinomycetota
Rhodococcus sp. LB1 [LTCZ]
13519
13444
-
Glu
CTC
[ENA]
¡û
>W1610949533
LVCW01000127
Actinomycetota
Rhodococcus sp. EPR-279 [LVCW]
26804
26729
-
Glu
CTC
[ENA]
¡û
>W1611040897
LZMI01000035
Actinomycetota
Gordonia sp. 852002-51296_SCH5728562-b [LZMI]
81917
81842
-
Glu
CTC
[ENA]
¡û
>W1611041195
LZMO01000188
Actinomycetota
Gordonia sp. 852002-10350_SCH5691597 [LZMO]
41600
41525
-
Glu
CTC
[ENA]
¡û
>W1611044092
LZTD01000117
Actinomycetota
Gordonia sp. 852002-50816_SCH5313054-a [LZTD]
8391
8316
-
Glu
CTC
[ENA]
¡û
>W1710046552
BBFO01000458
Actinomycetota
Rhodococcus opacus RKJ300 = JCM 13270 [BBFO]
3025
3100
+
Glu
CTC
[ENA]
¡û
>W1710046954
BBFZ01000452
Actinomycetota
Rhodococcus sp. JCM 3009 [BBFZ]
2926
3001
+
Glu
CTC
[ENA]
¡û
>W1710047125
BBGD01001428
Actinomycetota
Gordonia polyisoprenivorans NBRC 16320 = JCM 10675 [BBGD]
869
796
-
Glu
CTC
[ENA]
¡û
>W1710065935
BCRL01000001
Actinomycetota
Prescottella equi NBRC 101255 = C 7 [BCRL]
16521
16446
-
Glu
CTC
[ENA]
¡û
>W1710065936
BCRL01000001
Actinomycetota
Prescottella equi NBRC 101255 = C 7 [BCRL]
16378
16303
-
Glu
CTC
[ENA]
¡û
>W1710071084
BCWH01000003
Actinomycetota
Rhodococcus sp. YH3-3 [BCWH]
287114
287189
+
Glu
CTC
[ENA]
¡û
>W1710071877
BCWY01000006
Actinomycetota
Rhodococcus jostii NBRC 16295 [BCWY]
33970
33895
-
Glu
CTC
[ENA]
¡û
>W1710071920
BCWZ01000008
Actinomycetota
Rhodococcus koreensis JCM 10743 = NBRC 100607 [BCWZ]
185914
185989
+
Glu
CTC
[ENA]
¡û
>W1710071973
BCXA01000006
Actinomycetota
Rhodococcus maanshanensis NBRC 100610 [BCXA]
132375
132300
-
Glu
CTC
[ENA]
¡û
>W1710072136
BCXD01000009
Actinomycetota
Rhodococcus rhodnii NBRC 100604 [BCXD]
91624
91699
+
Glu
CTC
[ENA]
¡û
>W1710077122
BDAZ01000017
Actinomycetota
Nocardia anaemiae NBRC 100462 [BDAZ]
55969
55894
-
Glu
CTC
[ENA]
¡û
>W1710077311
BDBD01000005
Actinomycetota
Nocardia coubleae NBRC 108252 [BDBD]
65047
64972
-
Glu
CTC
[ENA]
¡û
>W1710077312
BDBD01000007
Actinomycetota
Nocardia coubleae NBRC 108252 [BDBD]
74466
74539
+
Glu
CTC
[ENA]
¡û
>W1710077550
BDBH01000012
Actinomycetota
Nocardia harenae NBRC 108248 [BDBH]
166085
166158
+
Glu
CTC
[ENA]
¡û
>W1710077793
BDBM01000009
Actinomycetota
Nocardia gamkensis NBRC 108242 [BDBM]
126319
126246
-
Glu
CTC
[ENA]
¡û
>W1710081851
BDGK01000019
Actinomycetota
Rhodococcus sp. Br-6 [BDGK]
709969
709894
-
Glu
CTC
[ENA]
¡û
>W1710081852
BDGK01000019
Actinomycetota
Rhodococcus sp. Br-6 [BDGK]
709826
709751
-
Glu
CTC
[ENA]
¡û
>W1710082982
BDIV01000001
Actinomycetota
Rhodococcus sp. Br-6 [BDIV]
456764
456839
+
Glu
CTC
[ENA]
¡û
>W1710082983
BDIV01000001
Actinomycetota
Rhodococcus sp. Br-6 [BDIV]
456907
456982
+
Glu
CTC
[ENA]
¡û
>W1710507184
FMVB01000003
Actinomycetota
Rhodococcus erythropolis 164Chir2E [FMVB]
63631
63556
-
Glu
CTC
[ENA]
¡û
>W1710527921
FNLM01000034
Actinomycetota
Gordonia westfalica [FNLM]
1289166
1289093
-
Glu
CTC
[ENA]
¡û
>W1710527922
FNLM01000034
Actinomycetota
Gordonia westfalica [FNLM]
1288992
1288919
-
Glu
CTC
[ENA]
¡û
>W1710534637
FNRZ01000004
Actinomycetota
Gordonia malaquae [FNRZ]
1029776
1029701
-
Glu
CTC
[ENA]
¡û
>W1710535897
FNSV01000005
Actinomycetota
Rhodococcus koreensis [FNSV]
1533263
1533188
-
Glu
CTC
[ENA]
¡û
>W1710551744
FOGI01000004
Actinomycetota
Actinokineospora terrae [FOGI]
239784
239711
-
Glu
CTC
[ENA]
¡û
>W1710555492
FOJN01000001
Actinomycetota
Rhodococcus kroppenstedtii [FOJN]
17051
16978
-
Glu
CTC
[ENA]
¡û
>W1710629130
JPYZ01000008
Actinomycetota
Gordonia sp. QH-12 [JPYZ]
50121
50048
-
Glu
CTC
[ENA]
¡û
>W1710774593
LIYC01000010
Actinomycetota
Gordonia sp. HS-NH1 [LIYC]
116852
116777
-
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
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Start
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Direction
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Representative sequence of each cluster
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