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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.322982 (4 seq.)
>W2010930007
MZMR01000001
Actinomycetota
Mycolicibacterium sp. CBMA 213 [MZMR]
246660
246587
-
Trp
CCA
[ENA]
¡û
>W2011207595
POTN01000023
Actinomycetota
Mycolicibacterium aubagnense DSM 45150 [POTN]
61184
61111
-
Trp
CCA
[ENA]
¡û
>W2012140324
VTHG01000009
Actinomycetota
Mycolicibacterium sp. CBMA 335 CBMA335 [VTHG]
244965
244892
-
Trp
CCA
[ENA]
¡û
>C201017274
AP022577
Actinomycetota
Mycolicibacterium aubagnense JCM 15296 [AP022577]
56195
56122
-
Trp
CCA
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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