tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.323307 (107 seq.)
>W1711129672 LUUF01000103 Gammaproteobacteria Methylomonas methanica [LUUF] 136 61 - Thr GGT [ENA] ¡û
>W1711129701 LUUG01000083 Gammaproteobacteria Methylomonas methanica [LUUG] 9518 9593 + Thr GGT [ENA] ¡û
>W1711129863 LUUK01000054 Gammaproteobacteria Methylomonas koyamae [LUUK] 25180 25255 + Thr GGT [ENA] ¡û
>W1711494845 MKMC01000009 Gammaproteobacteria Methylomonas sp. LWB [MKMC] 114532 114607 + Thr GGT [ENA] ¡û
>W131034050 AJGP01000026 Gammaproteobacteria Isoalcanivorax pacificus W11-5 [AJGP] 273 198 - Thr GGT [ENA] ¡û
>W131182890 ARRC01000005 Gammaproteobacteria gamma proteobacterium SCGC AAA300-D14 [ARRC] 73431 73506 + Thr GGT [ENA] ¡û
>W131155778 AQOV01000002 Gammaproteobacteria Methylomonas sp. MK1 [AQOV] 451208 451283 + Thr GGT [ENA] ¡û
>WENV180046199 MPLT02064846 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 1525 1450 - Thr GGT [ENA] ¡û
>WENV180102239 OAOY01001276 [OAOY] marine metagenome; Water 615 540 - Thr GGT [ENA] ¡û
>WENV180109452 OAPK01004233 [OAPK] marine metagenome; ENVO:00002042 474 549 + Thr GGT [ENA] ¡û
>WENV180209805 OBAL01024499 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 317 392 + Thr GGT [ENA] ¡û
>WENV180368800 OBOG01000769 [OBOG] marine metagenome; seawater 2135 2060 - Thr GGT [ENA] ¡û
>WENV180373364 OBOJ01000015 [OBOJ] marine metagenome; seawater 11681 11606 - Thr GGT [ENA] ¡û
>WENV180378016 OBOO01000994 [OBOO] marine metagenome; ENVO 00002150 2203 2278 + Thr GGT [ENA] ¡û
>W141219941 AZXK01000002 Gammaproteobacteria Methylomonas sp. 11b [AZXK] 1215712 1215637 - Thr GGT [ENA] ¡û
>WENV183698943 OZSS01007589 [OZSS] metagenome; Seawater sample 3518 3443 - Thr GGT [ENA] ¡û
>WENV183703470 PDVJ01016511 [PDVJ] alkali sediment metagenome; glacial lake sediment 1368 1293 - Thr GGT [ENA] ¡û
>WENV170124698 CENP01002490 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 16797 16722 - Thr GGT [ENA] ¡û
>WENV170129328 CENQ01083771 [CENQ] marine metagenome genome assembly TARA_031_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1697 1622 - Thr GGT [ENA] ¡û
>WENV170133080 CENU01002792 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4055 3980 - Thr GGT [ENA] ¡û
>WENV170137837 CENW01062163 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 308 383 + Thr GGT [ENA] ¡û
>WENV170172046 CEOQ01089927 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 428 353 - Thr GGT [ENA] ¡û
>WENV170204772 CEPT01031710 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 904 829 - Thr GGT [ENA] ¡û
>WENV170233119 CEQJ01001647 [CEQJ] marine metagenome genome assembly TARA_076_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 233 158 - Thr GGT [ENA] ¡û
>WENV170247496 CEQQ01042437 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 251 176 - Thr GGT [ENA] ¡û
>WENV170297855 CESF01015179 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 617 542 - Thr GGT [ENA] ¡û
>WENV170300336 CESG01114799 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 241 316 + Thr GGT [ENA] ¡û
>WENV170301308 CESH01023735 [CESH] marine metagenome genome assembly TARA_094_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 107 182 + Thr GGT [ENA] ¡û
>WENV170314543 CESO01005370 [CESO] marine metagenome genome assembly TARA_093_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 111 186 + Thr GGT [ENA] ¡û
>WENV170330833 CESW01005476 [CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1748 1673 - Thr GGT [ENA] ¡û
>WENV170346291 CETG01027593 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 191 116 - Thr GGT [ENA] ¡û
>WENV170350001 CETH01056003 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 862 937 + Thr GGT [ENA] ¡û
>WENV170356302 CETJ01019937 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2430 2355 - Thr GGT [ENA] ¡û
>WENV170366051 CETO01027997 [CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 111 186 + Thr GGT [ENA] ¡û
>WENV170371824 CETS01042607 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6439 6364 - Thr GGT [ENA] ¡û
>WENV170412796 CEUK01056705 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2220 2145 - Thr GGT [ENA] ¡û
>WENV170418438 CEUM01041551 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 685 760 + Thr GGT [ENA] ¡û
>WENV170420996 CEUN01039800 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1599 1674 + Thr GGT [ENA] ¡û
>WENV170421241 CEUN01058892 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 35230 35155 - Thr GGT [ENA] ¡û
>WENV170432552 CEUS01100246 [CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 386 311 - Thr GGT [ENA] ¡û
>WENV170449963 CEUZ01087365 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 587 512 - Thr GGT [ENA] ¡û
>WENV170468334 CEVF01025586 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2408 2483 + Thr GGT [ENA] ¡û
>WENV170474557 CEVH01152270 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 244 319 + Thr GGT [ENA] ¡û
>WENV170521328 CEWG01000461 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 107 182 + Thr GGT [ENA] ¡û
>WENV170532377 CEWO01036688 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 108 183 + Thr GGT [ENA] ¡û
>WENV170577522 FSSH01000114 [FSSH] freshwater metagenome; drinking water 4920 4845 - Thr GGT [ENA] ¡û
>WENV170577939 FSSH01003444 [FSSH] freshwater metagenome; drinking water 1441 1516 + Thr GGT [ENA] ¡û
>WENV170578969 FUFK010037659 [FUFK] metagenome; unknown 18193 18268 + Thr GGT [ENA] ¡û
>WENV170580661 FUFK010049239 [FUFK] metagenome; unknown 1733 1808 + Thr GGT [ENA] ¡û
>WENV170585667 FUFK010312908 [FUFK] metagenome; unknown 194 269 + Thr GGT [ENA] ¡û
>WENV170587108 FUFK010467899 [FUFK] metagenome; unknown 1397 1322 - Thr GGT [ENA] ¡û
>WENV170591239 FUFK010756691 [FUFK] metagenome; unknown 1462 1537 + Thr GGT [ENA] ¡û
>WENV170641939 JFJP01038268 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 13221 13146 - Thr GGT [ENA] ¡û
>WENV170642955 JFJP01047339 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 5620 5545 - Thr GGT [ENA] ¡û
>WENV170646743 JQIA01002531 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 9480 9405 - Thr GGT [ENA] ¡û
>WENV170734800 LULK01020705 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 65 140 + Thr GGT [ENA] ¡û
>WENV170750541 LUMG01022869 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 66 141 + Thr GGT [ENA] ¡û
>WENV170751924 LUMI01016721 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 65 140 + Thr GGT [ENA] ¡û
>WENV170758121 LUMQ01038516 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 373 298 - Thr GGT [ENA] ¡û
>WENV170758686 LUMR01015270 [LUMR] marine metagenome; Red Sea water column Station 12 - depth 10m 64 139 + Thr GGT [ENA] ¡û
>WENV170804024 MDSW01040184 [MDSW] marine metagenome; seawater 9255 9180 - Thr GGT [ENA] ¡û
>WENV170812798 MDSW01189641 [MDSW] marine metagenome; seawater 197 272 + Thr GGT [ENA] ¡û
>WENV170836566 MDSZ01133823 [MDSZ] marine metagenome; seawater 242 317 + Thr GGT [ENA] ¡û
>WENV170848008 MDTA01071647 [MDTA] marine metagenome; seawater 2882 2807 - Thr GGT [ENA] ¡û
>WENV170850309 MDTA01111958 [MDTA] marine metagenome; seawater 3360 3435 + Thr GGT [ENA] ¡û
>WENV170856907 MDTB01001682 [MDTB] marine metagenome; seawater 3243 3318 + Thr GGT [ENA] ¡û
>WENV170858509 MDTB01023836 [MDTB] marine metagenome; seawater 2841 2766 - Thr GGT [ENA] ¡û
>WENV170862052 MDTB01072583 [MDTB] marine metagenome; seawater 1478 1553 + Thr GGT [ENA] ¡û
>WENV170891289 MDTD01022070 [MDTD] marine metagenome; seawater 2 77 + Thr GGT [ENA] ¡û
>WENV170904780 MDTE01016703 [MDTE] marine metagenome; seawater 2455 2530 + Thr GGT [ENA] ¡û
>W09118477 ACCY01000014 Gammaproteobacteria Luminiphilus syltensis NOR51-B [ACCY] 241898 241973 + Thr GGT [ENA] ¡û
>C191105411 CP033381 Gammaproteobacteria Methylomonas sp. LW13 [CP033381] 959776 959851 + Thr GGT - ¡û
>W1810090388 PGFZ01000002 Gammaproteobacteria Methylovulum psychrotolerans Sph1 [PGFZ] 422273 422348 + Thr GGT [ENA] ¡û
>W1810296005 PTIY01000003 Gammaproteobacteria Methylobacter tundripaludum OWC-G53F [PTIY] 169092 169017 - Thr GGT [ENA] ¡û
>W1810518037 QCDB01000001 Gammaproteobacteria SAR86 cluster bacterium AG-349-I13 [QCDB] 36766 36691 - Thr GGT [ENA] ¡û
>W1810525000 QCMX01000011 Gammaproteobacteria SAR86 cluster bacterium AG-422-P06 [QCMX] 2672 2597 - Thr GGT [ENA] ¡û
>SRA1007625 SRR020489.149005 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 71 146 + Thr GGT [SRA]
>W1810885935 QUNR01000002 Gammaproteobacteria Paraperlucidibaca baekdonensis DSM 26022 [QUNR] 2474 2549 + Thr GGT [ENA] ¡û
>C151006521 CP004387 Gammaproteobacteria Isoalcanivorax pacificus W11-5 [CP004387] 596834 596909 + Thr GGT [Ensembl] ¡û
>W2010314819 CACEBC010000018 Gammaproteobacteria Porticoccaceae bacterium [CACEBC] 21375 21450 + Thr GGT [ENA] ¡û
>W2010316463 CACLFZ010000021 Gammaproteobacteria Porticoccaceae bacterium [CACLFZ] 12067 12142 + Thr GGT [ENA] ¡û
>W2011506024 RYFG02000012 Gammaproteobacteria Candidatus Methylobacter oryzae KRF1 [RYFG] 427 352 - Thr GGT [ENA] ¡û
>W2011630988 SMCN01000003 Gammaproteobacteria Methylomonas methanica S-1 [SMCN] 107145 107220 + Thr GGT [ENA] ¡û
>W2011670466 SPIA01000010 Gammaproteobacteria Gammaproteobacteria bacterium LSUCC0057 [SPIA] 677 752 + Thr GGT [ENA] ¡û
>W2011678623 SRLE01000002 Gammaproteobacteria Haliea sp. SAOS-164 [SRLE] 98524 98599 + Thr GGT [ENA] ¡û
>W2110691056 JAIOUB010000006 Gammaproteobacteria Alcanivorax sp. JB21 [JAIOUB] 19725 19800 + Thr GGT [ENA] ¡û
>C211191849 CP064653 Gammaproteobacteria Methylomonas sp. LL1 [CP064653] 4251056 4251131 + Thr GGT - ¡û
>C211276971 CP070494 Gammaproteobacteria Methylomonas sp. EFPC1 [CP070494] 818228 818303 + Thr GGT - ¡û
>C241044710 CP036423 Gammaproteobacteria Aequoribacter fuscus IMCC3088 [CP036423] 409989 410064 + Thr GGT - ¡û
>C241083515 CP043929 Gammaproteobacteria Methylomonas rhizoryzae GJ1 [CP043929] 528250 528325 + Thr GGT - ¡û
>C241250637 CP123897 Gammaproteobacteria Methylomonas sp. UP202 [CP123897] 807668 807743 + Thr GGT - ¡û
>C241290268 CP129884 Gammaproteobacteria Methylomonas montana MW1 [CP129884] 3715413 3715338 - Thr GGT - ¡û
>C241314722 CP133985 Gammaproteobacteria Methylomonas koyamae MY1 [CP133985] 4131082 4131007 - Thr GGT - ¡û
>C11114746 CP002738 Gammaproteobacteria Methylomonas methanica MC09 [CP002738] 4244865 4244790 - Thr GGT [Ensembl] ¡û
>W1511397889 JTDD01000125 Gammaproteobacteria Methylomonas denitrificans FJG1 [JTDD] 41606 41681 + Thr GGT [ENA] ¡û
>W1511569390 LAJX01000026 Gammaproteobacteria Methylocucumis oryzae Sn10-6 [LAJX] 33195 33120 - Thr GGT [ENA] ¡û
>C121016526 FP929140 Gammaproteobacteria gamma proteobacterium HdN1 [FP929140] 448557 448632 + Thr GGT [Ensembl] ¡û
>C161072128 CP014360 Gammaproteobacteria Methylomonas sp. DH-1 [CP014360] 4027602 4027527 - Thr GGT [Ensembl] ¡û
>C161073904 CP014544 Gammaproteobacteria Zhongshania aliphaticivorans SM-2 [CP014544] 482330 482405 + Thr GGT [Ensembl] ¡û
>W121064522 AJMK01000028 Gammaproteobacteria gamma proteobacterium BDW918 [AJMK] 37266 37191 - Thr GGT [ENA] ¡û
>W1610046492 BBCK01000084 Gammaproteobacteria Methylomonas koyamae JCM 16701 [BBCK] 18449 18524 + Thr GGT [ENA] ¡û
>W1610940745 LUUF01000103 Gammaproteobacteria Methylomonas methanica [LUUF] 136 61 - Thr GGT [ENA] ¡û
>W1610940774 LUUG01000083 Gammaproteobacteria Methylomonas methanica [LUUG] 9518 9593 + Thr GGT [ENA] ¡û
>W1610940860 LUUI01000133 Gammaproteobacteria Methylomonas lenta [LUUI] 181 106 - Thr GGT [ENA] ¡û
>W1610940936 LUUK01000054 Gammaproteobacteria Methylomonas koyamae [LUUK] 25180 25255 + Thr GGT [ENA] ¡û
>W1610940971 LUUL01000054 Gammaproteobacteria Methylomonas koyamae [LUUL] 18475 18550 + Thr GGT [ENA] ¡û
>W1710043288 BBCK01000084 Gammaproteobacteria Methylomonas koyamae JCM 16701 [BBCK] 18449 18524 + Thr GGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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