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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.325097 (274 seq.)
>W1710926750
LOEL01000010
Bacteroidota
Porphyromonas gingivalis [LOEL]
39725
39652
-
Thr
CGT
[ENA]
¡û
>W1711066947
LSDJ01000061
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
7304
7231
-
Thr
CGT
[ENA]
¡û
>W1711135261
LUYT01000006
Bacteroidota
Bacteroidales bacterium Bact_02 [LUYT]
144175
144100
-
Thr
CGT
[ENA]
¡û
>W131111420
APMB01000032
Bacteroidota
Porphyromonas gingivalis JCVI SC001 [APMB]
5108
5181
+
Thr
CGT
[ENA]
¡û
>W131165876
ARBY01000001
Bacteroidota
Porphyromonas macacae DSM 20710 [ARBY]
300114
300041
-
Thr
CGT
[ENA]
¡û
>W131175794
ARJN01000040
Bacteroidota
Porphyromonas gulae DSM 15663 [ARJN]
25034
24961
-
Thr
CGT
[ENA]
¡û
>W131240983
BAOU01000009
Bacteroidota
Porphyromonas crevioricanis JCM 15906 [BAOU]
72154
72227
+
Thr
CGT
[ENA]
¡û
>W131241038
BAOV01000012
Bacteroidota
Porphyromonas crevioricanis JCM 13913 [BAOV]
6408
6335
-
Thr
CGT
[ENA]
¡û
>W1712084880
NHRU01000009
Bacteroidota
Porphyromonas gingivalis [NHRU]
87397
87470
+
Thr
CGT
[ENA]
¡û
>C016362
AE015924
Bacteroidota
Porphyromonas gingivalis W83 [AE015924]
1214224
1214296
+
Thr
CGT
[Ensembl]
¡û
>WENV180005701
FLRW01242992
[FLRW] metagenome; saliva
126
53
-
Thr
CGT
[ENA]
¡û
>WENV180005853
FLRX01010094
[FLRX] metagenome; saliva
1
74
+
Thr
CGT
[ENA]
¡û
>WENV180009884
FLSC01143709
[FLSC] metagenome; saliva
90
163
+
Thr
CGT
[ENA]
¡û
>WENV180010895
FLSI01003976
[FLSI] metagenome; saliva
65
138
+
Thr
CGT
[ENA]
¡û
>WENV180118031
OARX01000018
[OARX] human gut metagenome; ENVO:feces
4845
4918
+
Thr
CGT
[ENA]
¡û
>WENV180153970
OAUS01003981
[OAUS] human gut metagenome; faeces
2673
2600
-
Thr
CGT
[ENA]
¡û
>WENV180226194
OBBP01091009
[OBBP] human oral metagenome; human oral
121
194
+
Thr
CGT
[ENA]
¡û
>WENV180503154
OCAM01002676
[OCAM] human gut metagenome; faeces
5056
5129
+
Thr
CGT
[ENA]
¡û
>WENV180519502
OCHE01001562
[OCHE] human gut metagenome; human gut
1428
1501
+
Thr
CGT
[ENA]
¡û
>WENV180520756
OCHF01000063
[OCHF] human gut metagenome; human gut
82156
82083
-
Thr
CGT
[ENA]
¡û
>WENV180523892
OCHH01000031
[OCHH] human gut metagenome; human gut
82155
82082
-
Thr
CGT
[ENA]
¡û
>WENV180525979
OCHI01003394
[OCHI] human gut metagenome; human gut
1466
1539
+
Thr
CGT
[ENA]
¡û
>WENV180535252
OCHN01000106
[OCHN] human gut metagenome; human gut
4311
4384
+
Thr
CGT
[ENA]
¡û
>WENV180550468
OCJA01031154
[OCJA] human oral metagenome; human oral
130
57
-
Thr
CGT
[ENA]
¡û
>WENV180567025
OCLL01002989
[OCLL] human gut metagenome; human gut
2528
2601
+
Thr
CGT
[ENA]
¡û
>WENV180605299
OCPT01000066
[OCPT] human gut metagenome; human gut
82155
82082
-
Thr
CGT
[ENA]
¡û
>WENV180610262
OCPW01000026
[OCPW] human gut metagenome; human gut
82155
82082
-
Thr
CGT
[ENA]
¡û
>WENV180615104
OCPZ01000246
[OCPZ] human gut metagenome; human gut
4432
4505
+
Thr
CGT
[ENA]
¡û
>WENV180642432
OCRP01000136
[OCRP] human gut metagenome; human gut
5802
5875
+
Thr
CGT
[ENA]
¡û
>WENV180708544
ODFJ01002812
[ODFJ] human metagenome; G_DNA_Tongue dorsum
4281
4354
+
Thr
CGT
[ENA]
¡û
>WENV180720765
ODGJ01143258
[ODGJ] human metagenome; G_DNA_Tongue dorsum
83
10
-
Thr
CGT
[ENA]
¡û
>WENV180726789
ODGU01000527
[ODGU] human metagenome; G_DNA_Supragingival plaque
26188
26115
-
Thr
CGT
[ENA]
¡û
>WENV180726929
ODGU01001086
[ODGU] human metagenome; G_DNA_Supragingival plaque
3037
3110
+
Thr
CGT
[ENA]
¡û
>WENV180727064
ODGU01001885
[ODGU] human metagenome; G_DNA_Supragingival plaque
11703
11629
-
Thr
CGT
[ENA]
¡û
>WENV180729130
ODGU01210205
[ODGU] human metagenome; G_DNA_Supragingival plaque
220
147
-
Thr
CGT
[ENA]
¡û
>WENV180731542
ODGW01001822
[ODGW] human metagenome; G_DNA_Supragingival plaque
1139
1066
-
Thr
CGT
[ENA]
¡û
>WENV180746970
ODHN01001147
[ODHN] human metagenome; G_DNA_Stool
4966
5039
+
Thr
CGT
[ENA]
¡û
>WENV180749927
ODHS01000127
[ODHS] human metagenome; G_DNA_Supragingival plaque
33579
33652
+
Thr
CGT
[ENA]
¡û
>WENV180759140
ODHY01000816
[ODHY] human metagenome; G_DNA_Buccal mucosa
8940
8867
-
Thr
CGT
[ENA]
¡û
>WENV180780139
ODIN01054623
[ODIN] human metagenome; G_DNA_Throat
111
38
-
Thr
CGT
[ENA]
¡û
>WENV180782108
ODIP01020760
[ODIP] human metagenome; G_DNA_Supragingival plaque
825
898
+
Thr
CGT
[ENA]
¡û
>WENV180782613
ODIQ01000072
[ODIQ] human metagenome; G_DNA_Tongue dorsum
62844
62917
+
Thr
CGT
[ENA]
¡û
>WENV180790115
ODIT01003987
[ODIT] human metagenome; G_DNA_Tongue dorsum
3610
3537
-
Thr
CGT
[ENA]
¡û
>WENV180795534
ODJB01000027
[ODJB] human metagenome; G_DNA_Supragingival plaque
76182
76255
+
Thr
CGT
[ENA]
¡û
>WENV180803720
ODJG01000023
[ODJG] human metagenome; G_DNA_Supragingival plaque
59214
59287
+
Thr
CGT
[ENA]
¡û
>WENV180807291
ODJI01001198
[ODJI] human metagenome; G_DNA_Tongue dorsum
3371
3444
+
Thr
CGT
[ENA]
¡û
>WENV180808608
ODJK01000287
[ODJK] human metagenome; G_DNA_Subgingival plaque
10783
10710
-
Thr
CGT
[ENA]
¡û
>WENV180810607
ODJM01000011
[ODJM] human metagenome; G_DNA_Buccal mucosa
107
34
-
Thr
CGT
[ENA]
¡û
>WENV180824173
ODJX01001132
[ODJX] human metagenome; G_DNA_Supragingival plaque
2
76
+
Thr
CGT
[ENA]
¡û
>WENV180830410
ODKB01002863
[ODKB] human metagenome; G_DNA_Tongue dorsum
2063
2136
+
Thr
CGT
[ENA]
¡û
>WENV180832021
ODKC01000351
[ODKC] human metagenome; G_DNA_Supragingival plaque
44870
44797
-
Thr
CGT
[ENA]
¡û
>WENV180832214
ODKC01000743
[ODKC] human metagenome; G_DNA_Supragingival plaque
20832
20905
+
Thr
CGT
[ENA]
¡û
>WENV180832290
ODKC01000991
[ODKC] human metagenome; G_DNA_Supragingival plaque
14177
14251
+
Thr
CGT
[ENA]
¡û
>WENV180832788
ODKC01004502
[ODKC] human metagenome; G_DNA_Supragingival plaque
3813
3886
+
Thr
CGT
[ENA]
¡û
>WENV180842655
ODKM01111002
[ODKM] human metagenome; G_DNA_Buccal mucosa
104
31
-
Thr
CGT
[ENA]
¡û
>WENV180845727
ODKT01001716
[ODKT] human metagenome; G_DNA_Supragingival plaque
5067
5140
+
Thr
CGT
[ENA]
¡û
>WENV180845837
ODKT01002421
[ODKT] human metagenome; G_DNA_Supragingival plaque
1847
1774
-
Thr
CGT
[ENA]
¡û
>WENV180845919
ODKT01003015
[ODKT] human metagenome; G_DNA_Supragingival plaque
5814
5741
-
Thr
CGT
[ENA]
¡û
>WENV180846841
ODKT01025346
[ODKT] human metagenome; G_DNA_Supragingival plaque
1858
1931
+
Thr
CGT
[ENA]
¡û
>WENV180855215
ODKX01047911
[ODKX] human metagenome; G_DNA_Tongue dorsum
86
13
-
Thr
CGT
[ENA]
¡û
>WENV180855935
ODKZ01000527
[ODKZ] human metagenome; G_DNA_Tongue dorsum
14746
14673
-
Thr
CGT
[ENA]
¡û
>WENV180858614
ODLC01015127
[ODLC] human metagenome; G_DNA_Tongue dorsum
768
695
-
Thr
CGT
[ENA]
¡û
>WENV180859170
ODLD01000047
[ODLD] human metagenome; G_DNA_Supragingival plaque
57946
57873
-
Thr
CGT
[ENA]
¡û
>WENV180859487
ODLD01000895
[ODLD] human metagenome; G_DNA_Supragingival plaque
10378
10304
-
Thr
CGT
[ENA]
¡û
>WENV180861965
ODLE01021977
[ODLE] human metagenome; G_DNA_Tongue dorsum
901
974
+
Thr
CGT
[ENA]
¡û
>WENV180870068
ODLN01000448
[ODLN] human metagenome; G_DNA_Stool
41941
41868
-
Thr
CGT
[ENA]
¡û
>WENV180882066
ODMB01007245
[ODMB] human metagenome; G_DNA_Buccal mucosa
274
201
-
Thr
CGT
[ENA]
¡û
>WENV180888380
ODMN01000710
[ODMN] human metagenome; G_DNA_Supragingival plaque
15702
15628
-
Thr
CGT
[ENA]
¡û
>WENV180888434
ODMN01000944
[ODMN] human metagenome; G_DNA_Supragingival plaque
8756
8829
+
Thr
CGT
[ENA]
¡û
>WENV180893491
ODMR01007042
[ODMR] human metagenome; G_DNA_Stool
4956
5029
+
Thr
CGT
[ENA]
¡û
>WENV180923592
ODTK01000031
[ODTK] human metagenome; G_DNA_Supragingival plaque
74479
74406
-
Thr
CGT
[ENA]
¡û
>WENV180923750
ODTK01000120
[ODTK] human metagenome; G_DNA_Supragingival plaque
8151
8078
-
Thr
CGT
[ENA]
¡û
>WENV180924211
ODTK01001895
[ODTK] human metagenome; G_DNA_Supragingival plaque
2899
2972
+
Thr
CGT
[ENA]
¡û
>WENV180924698
ODTK01012250
[ODTK] human metagenome; G_DNA_Supragingival plaque
75
2
-
Thr
CGT
[ENA]
¡û
>WENV180934090
ODTR01021948
[ODTR] human metagenome; G_DNA_Supragingival plaque
693
766
+
Thr
CGT
[ENA]
¡û
>WENV180937914
ODTX01000192
[ODTX] human metagenome; G_DNA_Supragingival plaque
8797
8870
+
Thr
CGT
[ENA]
¡û
>WENV180938374
ODTX01001660
[ODTX] human metagenome; G_DNA_Supragingival plaque
1826
1900
+
Thr
CGT
[ENA]
¡û
>WENV180938848
ODTX01008110
[ODTX] human metagenome; G_DNA_Supragingival plaque
3127
3200
+
Thr
CGT
[ENA]
¡û
>WENV180947538
ODUF01023216
[ODUF] human metagenome; G_DNA_Supragingival plaque
98
25
-
Thr
CGT
[ENA]
¡û
>WENV180949643
ODUG01025910
[ODUG] human metagenome; G_DNA_Tongue dorsum
856
783
-
Thr
CGT
[ENA]
¡û
>WENV180950892
ODUH01003528
[ODUH] human metagenome; G_DNA_Subgingival plaque
3231
3158
-
Thr
CGT
[ENA]
¡û
>WENV180954865
ODUJ01012877
[ODUJ] human metagenome; G_DNA_Tongue dorsum
268
195
-
Thr
CGT
[ENA]
¡û
>WENV180974732
ODUX01071117
[ODUX] human metagenome; G_DNA_Buccal mucosa
132
59
-
Thr
CGT
[ENA]
¡û
>WENV180977101
ODUZ01000004
[ODUZ] human metagenome; G_DNA_Tongue dorsum
55884
55811
-
Thr
CGT
[ENA]
¡û
>WENV180982148
ODVE01169906
[ODVE] human metagenome; G_DNA_Supragingival plaque
146
220
+
Thr
CGT
[ENA]
¡û
>WENV180986788
ODVK01000830
[ODVK] human metagenome; G_DNA_Supragingival plaque
1463
1536
+
Thr
CGT
[ENA]
¡û
>WENV180992355
ODVP01001650
[ODVP] human metagenome; G_DNA_Buccal mucosa
3085
3158
+
Thr
CGT
[ENA]
¡û
>WENV180998717
ODVT01001530
[ODVT] human metagenome; G_DNA_Buccal mucosa
8833
8759
-
Thr
CGT
[ENA]
¡û
>WENV181010949
ODWI01001532
[ODWI] human metagenome; G_DNA_Tongue dorsum
991
1064
+
Thr
CGT
[ENA]
¡û
>WENV181021772
ODWV01043316
[ODWV] human metagenome; G_DNA_Tongue dorsum
499
572
+
Thr
CGT
[ENA]
¡û
>WENV181027518
ODXD01005846
[ODXD] human metagenome; G_DNA_Buccal mucosa
912
985
+
Thr
CGT
[ENA]
¡û
>WENV181029342
ODXF01000130
[ODXF] human metagenome; G_DNA_Supragingival plaque
14295
14222
-
Thr
CGT
[ENA]
¡û
>WENV181044085
ODXV01002830
[ODXV] human metagenome; G_DNA_Tongue dorsum
4417
4344
-
Thr
CGT
[ENA]
¡û
>WENV181051728
ODYE01001647
[ODYE] human metagenome; G_DNA_Tongue dorsum
904
977
+
Thr
CGT
[ENA]
¡û
>WENV181062947
ODYP01000010
[ODYP] human metagenome; G_DNA_Supragingival plaque
96736
96663
-
Thr
CGT
[ENA]
¡û
>WENV181062954
ODYP01000012
[ODYP] human metagenome; G_DNA_Supragingival plaque
89614
89687
+
Thr
CGT
[ENA]
¡û
>WENV181065607
ODYT01045004
[ODYT] human metagenome; G_DNA_Buccal mucosa
241
168
-
Thr
CGT
[ENA]
¡û
>WENV181066448
ODZI01000046
[ODZI] human metagenome; G_DNA_Supragingival plaque
55555
55482
-
Thr
CGT
[ENA]
¡û
>WENV181066712
ODZI01001103
[ODZI] human metagenome; G_DNA_Supragingival plaque
3314
3387
+
Thr
CGT
[ENA]
¡û
>WENV181074087
OEAO01003098
[OEAO] human metagenome; G_DNA_Tongue dorsum
1087
1160
+
Thr
CGT
[ENA]
¡û
>WENV181075870
OEAP01000533
[OEAP] human metagenome; G_DNA_Supragingival plaque
23777
23704
-
Thr
CGT
[ENA]
¡û
>WENV181076253
OEAP01003043
[OEAP] human metagenome; G_DNA_Supragingival plaque
3313
3386
+
Thr
CGT
[ENA]
¡û
>WENV181076585
OEAP01008164
[OEAP] human metagenome; G_DNA_Supragingival plaque
4440
4513
+
Thr
CGT
[ENA]
¡û
>WENV181082735
OEAV01000379
[OEAV] human metagenome; G_DNA_Supragingival plaque
8152
8079
-
Thr
CGT
[ENA]
¡û
>WENV181083834
OEAV01026742
[OEAV] human metagenome; G_DNA_Supragingival plaque
980
907
-
Thr
CGT
[ENA]
¡û
>WENV181084951
OEAX01000638
[OEAX] human metagenome; G_DNA_Tongue dorsum
10522
10449
-
Thr
CGT
[ENA]
¡û
>WENV181103835
OECV01005036
[OECV] human metagenome; G_DNA_Throat
721
648
-
Thr
CGT
[ENA]
¡û
>WENV181120917
OEFL01000009
[OEFL] human metagenome; G_DNA_Supragingival plaque
48681
48754
+
Thr
CGT
[ENA]
¡û
>WENV181124258
OEFQ01036483
[OEFQ] human metagenome; G_DNA_Supragingival plaque
225
298
+
Thr
CGT
[ENA]
¡û
>WENV181141592
OEGT01009721
[OEGT] human metagenome; G_DNA_Throat
1355
1282
-
Thr
CGT
[ENA]
¡û
>WENV181144091
OEHM01084980
[OEHM] human metagenome; G_DNA_Supragingival plaque
166
239
+
Thr
CGT
[ENA]
¡û
>WENV181149893
OEHW01000020
[OEHW] human metagenome; G_DNA_Tongue dorsum
55260
55333
+
Thr
CGT
[ENA]
¡û
>WENV181157209
OEIG01000832
[OEIG] human metagenome; G_DNA_Hard palate
7402
7329
-
Thr
CGT
[ENA]
¡û
>WENV181179382
OEJT01004143
[OEJT] human metagenome; G_DNA_Supragingival plaque
5315
5242
-
Thr
CGT
[ENA]
¡û
>WENV181180502
OEJU01000138
[OEJU] human metagenome; G_DNA_Supragingival plaque
29026
28953
-
Thr
CGT
[ENA]
¡û
>WENV181181751
OEJV01000177
[OEJV] human metagenome; G_DNA_Supragingival plaque
10409
10483
+
Thr
CGT
[ENA]
¡û
>WENV181182583
OEJV01019377
[OEJV] human metagenome; G_DNA_Supragingival plaque
1365
1438
+
Thr
CGT
[ENA]
¡û
>WENV181363833
OFOU01003841
[OFOU] human gut metagenome; human gut
4442
4369
-
Thr
CGT
[ENA]
¡û
>WENV181394047
OFRY01007696
[OFRY] human gut metagenome; human gut
78
5
-
Thr
CGT
[ENA]
¡û
>WENV181434211
OGDF01000445
[OGDF] human gut metagenome; human gut
7323
7250
-
Thr
CGT
[ENA]
¡û
>W141145941
AWVC01000013
Bacteroidota
Porphyromonas gingivalis F0185 [AWVC]
9315
9388
+
Thr
CGT
[ENA]
¡û
>WENV181543154
OGIE01007212
[OGIE] metagenome; Human gut stool
5387
5460
+
Thr
CGT
[ENA]
¡û
>WENV181562198
OGJF01000100
[OGJF] metagenome; Human gut stool
4854
4927
+
Thr
CGT
[ENA]
¡û
>WENV181821081
OGUD01019670
[OGUD] metagenome; Human gut stool
19
92
+
Thr
CGT
[ENA]
¡û
>WENV181996567
OHAU01000121
[OHAU] human gut metagenome; faeces
23466
23539
+
Thr
CGT
[ENA]
¡û
>WENV182004630
OHBE01000258
[OHBE] human gut metagenome; faeces
38330
38403
+
Thr
CGT
[ENA]
¡û
>WENV182006762
OHBG01000094
[OHBG] human gut metagenome; feces
920
847
-
Thr
CGT
[ENA]
¡û
>WENV182009506
OHBJ01019648
[OHBJ] human gut metagenome; faeces
889
816
-
Thr
CGT
[ENA]
¡û
>WENV182046114
OHDV01000006
[OHDV] human gut metagenome; feces
211
138
-
Thr
CGT
[ENA]
¡û
>WENV182085475
OHGS01000102
[OHGS] human gut metagenome; feces
48953
49026
+
Thr
CGT
[ENA]
¡û
>WENV182093956
OHHJ01000054
[OHHJ] human gut metagenome; feces
23848
23775
-
Thr
CGT
[ENA]
¡û
>WENV182113674
OHIY01000012
[OHIY] human gut metagenome; feces
26086
26159
+
Thr
CGT
[ENA]
¡û
>WENV182138691
OHKO01000190
[OHKO] human gut metagenome; feces
19615
19542
-
Thr
CGT
[ENA]
¡û
>WENV182140176
OHKQ01000094
[OHKQ] human gut metagenome; feces
920
847
-
Thr
CGT
[ENA]
¡û
>WENV182151867
OHLK01002264
[OHLK] human gut metagenome; feces
2522
2595
+
Thr
CGT
[ENA]
¡û
>WENV182163444
OHMK01000006
[OHMK] human gut metagenome; feces
178807
178880
+
Thr
CGT
[ENA]
¡û
>WENV182171134
OHMX01000012
[OHMX] human gut metagenome; feces
88044
87971
-
Thr
CGT
[ENA]
¡û
>WENV182172181
OHMY01000569
[OHMY] human gut metagenome; feces
16047
15974
-
Thr
CGT
[ENA]
¡û
>WENV182221192
OHQT01000012
[OHQT] human gut metagenome; feces
61214
61141
-
Thr
CGT
[ENA]
¡û
>WENV182235965
OHRU01000219
[OHRU] human gut metagenome; feces
386
313
-
Thr
CGT
[ENA]
¡û
>WENV182262889
OHTO01000189
[OHTO] human gut metagenome; feces
15165
15092
-
Thr
CGT
[ENA]
¡û
>WENV182283747
OHVK01002286
[OHVK] human gut metagenome; feces
42
115
+
Thr
CGT
[ENA]
¡û
>WENV182285031
OHVM01035413
[OHVM] human gut metagenome; feces
485
412
-
Thr
CGT
[ENA]
¡û
>W141226947
BAKQ01000001
Bacteroidota
Porphyromonas macacae JCM 13914 [BAKQ]
314179
314252
+
Thr
CGT
[ENA]
¡û
>WENV182324023
OHYQ01014980
[OHYQ] human gut metagenome; feces
648
721
+
Thr
CGT
[ENA]
¡û
>WENV182326221
OHYU01007181
[OHYU] human gut metagenome; feces
1814
1741
-
Thr
CGT
[ENA]
¡û
>WENV182347619
OIAX01004168
[OIAX] human gut metagenome; feces
1509
1436
-
Thr
CGT
[ENA]
¡û
>WENV182429727
OIID01000008
[OIID] human gut metagenome; human gut
83612
83539
-
Thr
CGT
[ENA]
¡û
>WENV182482221
OIRE01000002
[OIRE] human gut metagenome; human gut
19446
19373
-
Thr
CGT
[ENA]
¡û
>WENV182483339
OIRI01000145
[OIRI] human gut metagenome; human gut
4419
4492
+
Thr
CGT
[ENA]
¡û
>WENV182483683
OIRJ01000082
[OIRJ] human gut metagenome; human gut
26574
26501
-
Thr
CGT
[ENA]
¡û
>WENV182499240
OITT01000006
[OITT] human gut metagenome; human gut
11165
11092
-
Thr
CGT
[ENA]
¡û
>WENV182802660
OJUG01031302
[OJUG] human gut metagenome; human gut
944
1017
+
Thr
CGT
[ENA]
¡û
>WENV182902218
OKSW01002670
[OKSW] human gut metagenome; feces
4821
4894
+
Thr
CGT
[ENA]
¡û
>WENV182984808
OKZN01000238
[OKZN] human gut metagenome; human gut
16497
16424
-
Thr
CGT
[ENA]
¡û
>WENV183009412
OLDR01000005
[OLDR] human gut metagenome; human gut
115073
115146
+
Thr
CGT
[ENA]
¡û
>WENV183027958
OLFV01000651
[OLFV] human gut metagenome; faeces
23621
23694
+
Thr
CGT
[ENA]
¡û
>WENV183043827
OLGE01000079
[OLGE] human gut metagenome; faeces
22456
22383
-
Thr
CGT
[ENA]
¡û
>C08007283
AP009380
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [AP009380]
1376103
1376176
+
Thr
CGT
[Ensembl]
¡û
>WENV183129372
OLNZ01101143
[OLNZ] human gut metagenome; faeces
524
451
-
Thr
CGT
[ENA]
¡û
>WENV183197612
OLPU01083650
[OLPU] human gut metagenome; faeces
500
427
-
Thr
CGT
[ENA]
¡û
>WENV183258263
OLRN01001713
[OLRN] human gut metagenome; faeces
3500
3427
-
Thr
CGT
[ENA]
¡û
>WENV183269670
OLRV01000921
[OLRV] human gut metagenome; faeces
4511
4584
+
Thr
CGT
[ENA]
¡û
>WENV183338493
OLWK01000166
[OLWK] human gut metagenome; feces
26928
27001
+
Thr
CGT
[ENA]
¡û
>WENV183339591
OLWL01000050
[OLWL] human gut metagenome; feces
81551
81624
+
Thr
CGT
[ENA]
¡û
>WENV183431036
OMBQ01000964
[OMBQ] human gut metagenome; feces
12610
12683
+
Thr
CGT
[ENA]
¡û
>WENV183482388
OMFM01000688
[OMFM] human gut metagenome; feces
9104
9177
+
Thr
CGT
[ENA]
¡û
>WENV183500715
OMGR01000119
[OMGR] human gut metagenome; human gut
42719
42646
-
Thr
CGT
[ENA]
¡û
>WENV183507973
OMHA01000035
[OMHA] human oral metagenome; human oral
3761
3834
+
Thr
CGT
[ENA]
¡û
>WENV183509277
OMHH01003991
[OMHH] human oral metagenome; human oral
25
98
+
Thr
CGT
[ENA]
¡û
>WENV183639054
OQVI01003120
[OQVI] human gut metagenome; human gut
7866
7793
-
Thr
CGT
[ENA]
¡û
>WENV183650067
OQVT01010359
[OQVT] human gut metagenome; human gut
4993
5066
+
Thr
CGT
[ENA]
¡û
>WENV183747131
PPCM01000249
[PPCM] marine sediment metagenome; marine sediment
24538
24463
-
Thr
CGT
[ENA]
¡û
>WENV183789223
PPYF01384818
[PPYF] human gut metagenome; stool from patient with Crohn's disease
69405
69332
-
Thr
CGT
[ENA]
¡û
>WENV170005252
AMCI01000953
[AMCI] gut metagenome; fecal sample from gut
565
640
+
Thr
CGT
[ENA]
¡û
>WENV170656692
JTFO01034539
[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
714
789
+
Thr
CGT
[ENA]
¡û
>WENV171002288
NFZJ01007669
[NFZJ] gut metagenome; feces
451
378
-
Thr
CGT
[ENA]
¡û
>C181102066
CP024591
Bacteroidota
Porphyromonas gingivalis KCOM 2802 [CP024591]
178631
178704
+
Thr
CGT
-
¡û
>C181102181
CP024593
Bacteroidota
Porphyromonas gingivalis KCOM 2804 [CP024593]
2319426
2319499
+
Thr
CGT
-
¡û
>C181102222
CP024594
Bacteroidota
Porphyromonas gingivalis KCOM 2805 [CP024594]
1306173
1306246
+
Thr
CGT
-
¡û
>C181102299
CP024595
Bacteroidota
Porphyromonas gingivalis KCOM 3001 [CP024595]
1116194
1116121
-
Thr
CGT
-
¡û
>C181102332
CP024596
Bacteroidota
Porphyromonas gingivalis KCOM 3131 [CP024596]
2082181
2082108
-
Thr
CGT
-
¡û
>C181102486
CP024599
Bacteroidota
Porphyromonas gingivalis KCOM 2800 [CP024599]
2020109
2020182
+
Thr
CGT
-
¡û
>C181102554
CP024601
Bacteroidota
Porphyromonas gingivalis KCOM 2799 [CP024601]
180412
180485
+
Thr
CGT
-
¡û
>C181123587
CP025930
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [CP025930]
1377158
1377231
+
Thr
CGT
-
¡û
>C181123636
CP025931
Bacteroidota
Porphyromonas gingivalis TDC 60 [CP025931]
1044700
1044773
+
Thr
CGT
-
¡û
>C181123712
CP025932
Bacteroidota
Porphyromonas gingivalis W83 [CP025932]
1201437
1201364
-
Thr
CGT
-
¡û
>W141740398
JNOS01000002
Bacteroidota
Porphyromonas sp. KLE 1280 [JNOS]
806342
806269
-
Thr
CGT
[ENA]
¡û
>W1910279778
FQSE01000007
Bacteroidota
Parabacteroides timonensis Marseille-P3236 [FQSE]
946210
946283
+
Thr
CGT
[ENA]
¡û
>W1910371016
FUFB01000021
Bacteroidota
Porphyromonas gingivalis 3_3 [FUFB]
18625
18698
+
Thr
CGT
[ENA]
¡û
>W1910371072
FUFC01000026
Bacteroidota
Porphyromonas gingivalis 3A1 [FUFC]
18049
18122
+
Thr
CGT
[ENA]
¡û
>W1910371165
FUFE01000085
Bacteroidota
Porphyromonas gingivalis 11A [FUFE]
140743
140670
-
Thr
CGT
[ENA]
¡û
>W1910371225
FUFG01000016
Bacteroidota
Porphyromonas gingivalis 84_3 [FUFG]
36380
36307
-
Thr
CGT
[ENA]
¡û
>W1910371265
FUFH01000017
Bacteroidota
Porphyromonas gingivalis ATCC 49417 [FUFH]
43643
43570
-
Thr
CGT
[ENA]
¡û
>W1910371326
FUFI01000027
Bacteroidota
Porphyromonas gingivalis SU60 [FUFI]
47408
47481
+
Thr
CGT
[ENA]
¡û
>W1910372551
FUGF01000002
Bacteroidota
Porphyromonas gingivalis 15_9 [FUGF]
123004
123077
+
Thr
CGT
[ENA]
¡û
>W1910372602
FUGG01000009
Bacteroidota
Porphyromonas gingivalis 13_1 [FUGG]
16841
16768
-
Thr
CGT
[ENA]
¡û
>W1910471902
FXDJ01000006
Bacteroidota
Massilibacteroides vaginae MV12 [FXDJ]
557821
557894
+
Thr
CGT
[ENA]
¡û
>W1911247366
NSLL01000008
Bacteroidota
Porphyromonas gingivalis WW5127 [NSLL]
13042
12969
-
Thr
CGT
[ENA]
¡û
>W1911247402
NSLM01000002
Bacteroidota
Porphyromonas gingivalis WW5019 [NSLM]
5060
5133
+
Thr
CGT
[ENA]
¡û
>W1911247548
NSLP01000018
Bacteroidota
Porphyromonas gingivalis WW3040 [NSLP]
18024
18097
+
Thr
CGT
[ENA]
¡û
>W1911247625
NSLR01000008
Bacteroidota
Porphyromonas gingivalis WW2931 [NSLR]
44325
44398
+
Thr
CGT
[ENA]
¡û
>W1911247777
NSLU01000087
Bacteroidota
Porphyromonas gingivalis WW2881 [NSLU]
2391
2318
-
Thr
CGT
[ENA]
¡û
>W1911247837
NSLW01000002
Bacteroidota
Porphyromonas gingivalis WW2842 [NSLW]
88098
88171
+
Thr
CGT
[ENA]
¡û
>W1810001026
BEWW01000146
Bacteroidota
Prevotella sp. MGM2 [BEWW]
223
296
+
Thr
CGT
[ENA]
¡û
>W1810877231
QUHH01000008
Bacteroidota
Parabacteroides sp. AF14-59 [QUHH]
189005
189078
+
Thr
CGT
[ENA]
¡û
>C151089065
CP011995
Bacteroidota
Porphyromonas gingivalis A7436 [CP011995]
953838
953765
-
Thr
CGT
-
¡û
>C151089081
CP011996
Bacteroidota
Porphyromonas gingivalis AJW4 [CP011996]
915974
916047
+
Thr
CGT
-
¡û
>W2010140300
BLMF01000166
Bacteroidota
Bacteroidaceae bacterium [BLMF]
364
437
+
Thr
CGT
[ENA]
¡û
>W2010393462
FQSE01000007
Bacteroidota
Parabacteroides timonensis Marseille-P3236 [FQSE]
946210
946283
+
Thr
CGT
[ENA]
¡û
>W2010400390
FUFB01000021
Bacteroidota
Porphyromonas gingivalis 3_3 [FUFB]
18625
18698
+
Thr
CGT
[ENA]
¡û
>W2010400446
FUFC01000026
Bacteroidota
Porphyromonas gingivalis 3A1 [FUFC]
18049
18122
+
Thr
CGT
[ENA]
¡û
>W2010400539
FUFE01000085
Bacteroidota
Porphyromonas gingivalis 11A [FUFE]
140743
140670
-
Thr
CGT
[ENA]
¡û
>W2010400599
FUFG01000016
Bacteroidota
Porphyromonas gingivalis 84_3 [FUFG]
36380
36307
-
Thr
CGT
[ENA]
¡û
>W2010400639
FUFH01000017
Bacteroidota
Porphyromonas gingivalis ATCC 49417 [FUFH]
43643
43570
-
Thr
CGT
[ENA]
¡û
>W2010400700
FUFI01000027
Bacteroidota
Porphyromonas gingivalis SU60 [FUFI]
47408
47481
+
Thr
CGT
[ENA]
¡û
>W2010401341
FUGF01000002
Bacteroidota
Porphyromonas gingivalis 15_9 [FUGF]
123004
123077
+
Thr
CGT
[ENA]
¡û
>W2010401392
FUGG01000009
Bacteroidota
Porphyromonas gingivalis 13_1 [FUGG]
16841
16768
-
Thr
CGT
[ENA]
¡û
>W2010410807
FXDJ01000006
Bacteroidota
Massilibacteroides vaginae MV12 [FXDJ]
557821
557894
+
Thr
CGT
[ENA]
¡û
>W2010712066
JACHOC010000001
Bacteroidota
Parabacteroides faecis DSM 102983 [JACHOC]
1035596
1035669
+
Thr
CGT
[ENA]
¡û
>W2011070871
NSLL01000008
Bacteroidota
Porphyromonas gingivalis WW5127 [NSLL]
13042
12969
-
Thr
CGT
[ENA]
¡û
>W2011070907
NSLM01000002
Bacteroidota
Porphyromonas gingivalis WW5019 [NSLM]
5060
5133
+
Thr
CGT
[ENA]
¡û
>W2011071053
NSLP01000018
Bacteroidota
Porphyromonas gingivalis WW3040 [NSLP]
18024
18097
+
Thr
CGT
[ENA]
¡û
>W2011071130
NSLR01000008
Bacteroidota
Porphyromonas gingivalis WW2931 [NSLR]
44325
44398
+
Thr
CGT
[ENA]
¡û
>W2011071282
NSLU01000087
Bacteroidota
Porphyromonas gingivalis WW2881 [NSLU]
2391
2318
-
Thr
CGT
[ENA]
¡û
>W2011071342
NSLW01000002
Bacteroidota
Porphyromonas gingivalis WW2842 [NSLW]
88098
88171
+
Thr
CGT
[ENA]
¡û
>W2011308118
QVMG01000037
Bacteroidota
Parabacteroides sp. 52 [QVMG]
5011
4938
-
Thr
CGT
[ENA]
¡û
>W2011559781
SGBA01000029
Bacteroidota
Porphyromonas gingivalis CP3 [SGBA]
3761
3834
+
Thr
CGT
[ENA]
¡û
>W2011836036
UGTI01000001
Bacteroidota
Porphyromonas macacae NCTC13100 [UGTI]
169775
169848
+
Thr
CGT
[ENA]
¡û
>W2011956225
UYXJ01000001
Bacteroidota
Parabacteroides goldsteinii DSM 19448 = WAL 12034 [UYXJ]
53717
53644
-
Thr
CGT
[ENA]
¡û
>W2110034812
BMPB01000004
Bacteroidota
Parabacteroides faecis JCM 18682 [BMPB]
331146
331219
+
Thr
CGT
[ENA]
¡û
>W2110035741
BMPU01000001
Bacteroidota
Porphyromonas pasteri JCM 30531 [BMPU]
783687
783614
-
Thr
CGT
[ENA]
¡û
>W2110248468
JACRTM010000001
Bacteroidota
Parabacteroides faecis 3BLK-D2-90 [JACRTM]
110043
109970
-
Thr
CGT
[ENA]
¡û
>C211321227
CP073348
Bacteroidota
Porphyromonas gingivalis GMU202011 [CP073348]
1000228
1000155
-
Thr
CGT
-
¡û
>C211321299
CP073350
Bacteroidota
Porphyromonas gingivalis LyG-2 [CP073350]
1394230
1394303
+
Thr
CGT
-
¡û
>C231311388
CP092048
Bacteroidota
Porphyromonas gingivalis W50 [CP092048]
1215421
1215494
+
Thr
CGT
-
¡û
>C231311437
CP092049
Bacteroidota
Porphyromonas gingivalis W50/BE1 [CP092049]
1213795
1213868
+
Thr
CGT
-
¡û
>C231465069
CP103108
Bacteroidota
Parabacteroides faecis BFG-489 [CP103108]
3826116
3826043
-
Thr
CGT
-
¡û
>C231580482
CP116612
Bacteroidota
Porphyromonas gingivalis A7436-C [CP116612]
953825
953752
-
Thr
CGT
-
¡û
>C231580500
CP116613
Bacteroidota
Porphyromonas gingivalis HG1691old [CP116613]
1078795
1078868
+
Thr
CGT
-
¡û
>C241193208
CP098924
Bacteroidota
Porphyromonas gingivalis yellow [CP098924]
1127971
1128044
+
Thr
CGT
-
¡û
>C241193257
CP098925
Bacteroidota
Porphyromonas gingivalis grey [CP098925]
1128016
1128089
+
Thr
CGT
-
¡û
>C241268130
CP126309
Bacteroidota
Porphyromonas gingivalis LyEC01 [CP126309]
1012055
1012128
+
Thr
CGT
-
¡û
>C241274239
CP126983
Bacteroidota
Porphyromonas gingivalis LyEC02 [CP126983]
1010371
1010444
+
Thr
CGT
-
¡û
>W1511328240
JQJB01000006
Bacteroidota
Porphyromonas crevioricanis COT-253 OH2125 [JQJB]
70407
70334
-
Thr
CGT
[ENA]
¡û
>W1511328361
JQJE01000021
Bacteroidota
Porphyromonas gulae OH3161B [JQJE]
164540
164467
-
Thr
CGT
[ENA]
¡û
>W1511336141
JQZY01000027
Bacteroidota
Porphyromonas sp. COT-052 OH4946 [JQZY]
3439
3512
+
Thr
CGT
[ENA]
¡û
>W1511336345
JRAE01000002
Bacteroidota
Porphyromonas gulae COT-052_OH2199 [JRAE]
42756
42683
-
Thr
CGT
[ENA]
¡û
>W1511336417
JRAF01000053
Bacteroidota
Porphyromonas gulae COT-052 OH3498 [JRAF]
17363
17290
-
Thr
CGT
[ENA]
¡û
>W1511336441
JRAG01000012
Bacteroidota
Porphyromonas gulae COT-052 OH1355 [JRAG]
212599
212526
-
Thr
CGT
[ENA]
¡û
>W1511336594
JRAJ01000011
Bacteroidota
Porphyromonas gulae COT-052 OH2179 [JRAJ]
237939
237866
-
Thr
CGT
[ENA]
¡û
>W1511336622
JRAK01000072
Bacteroidota
Porphyromonas gulae COT-052 OH3439 [JRAK]
4417
4490
+
Thr
CGT
[ENA]
¡û
>W1511336679
JRAL01000041
Bacteroidota
Porphyromonas gulae COT-052 OH4119 [JRAL]
112410
112483
+
Thr
CGT
[ENA]
¡û
>W1511336829
JRAQ01000019
Bacteroidota
Porphyromonas gulae COT-052 OH3471 [JRAQ]
105253
105180
-
Thr
CGT
[ENA]
¡û
>W1511336921
JRAT01000002
Bacteroidota
Porphyromonas gulae COT-052 OH3856 [JRAT]
208846
208919
+
Thr
CGT
[ENA]
¡û
>W1511343812
JRFA01000016
Bacteroidota
Porphyromonas macacae COT-192 OH2859 [JRFA]
10012
10085
+
Thr
CGT
[ENA]
¡û
>W1511343865
JRFB01000018
Bacteroidota
Porphyromonas macacae COT-192 OH2631 [JRFB]
305276
305203
-
Thr
CGT
[ENA]
¡û
>W1511343918
JRFD01000015
Bacteroidota
Porphyromonas gulae COT-052 OH2857 [JRFD]
108026
108099
+
Thr
CGT
[ENA]
¡û
>C161018155
CP007756
Bacteroidota
Porphyromonas gingivalis HG66 [CP007756]
1363303
1363230
-
Thr
CGT
[Ensembl]
¡û
>C161046928
CP012889
Bacteroidota
Porphyromonas gingivalis 381 [CP012889]
1375873
1375946
+
Thr
CGT
-
¡û
>W1610060530
BCBV01000031
Bacteroidota
Porphyromonas gingivalis [BCBV]
78467
78540
+
Thr
CGT
[ENA]
¡û
>W1610580627
LBCX01000001
Bacteroidota
Bacteroidales bacterium Barb4 [LBCX]
52825
52898
+
Thr
CGT
[ENA]
¡û
>W1610580702
LBCY01000497
Bacteroidota
Bacteroidales bacterium Barb6 [LBCY]
286
211
-
Thr
CGT
[ENA]
¡û
>W1610784243
LOEL01000010
Bacteroidota
Porphyromonas gingivalis [LOEL]
39725
39652
-
Thr
CGT
[ENA]
¡û
>W1610907517
LSDJ01000061
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
7304
7231
-
Thr
CGT
[ENA]
¡û
>W1610946381
LUYT01000006
Bacteroidota
Bacteroidales bacterium Bact_02 [LUYT]
144175
144100
-
Thr
CGT
[ENA]
¡û
>W1710017886
ASYM01000073
Bacteroidota
Porphyromonas gingivalis SJD4 [ASYM]
4714
4787
+
Thr
CGT
[ENA]
¡û
>W1710017911
ASYN01000023
Bacteroidota
Porphyromonas gingivalis SJD5 [ASYN]
4360
4433
+
Thr
CGT
[ENA]
¡û
>W1710018032
ASYP01000138
Bacteroidota
Porphyromonas gingivalis SJD12 [ASYP]
22888
22961
+
Thr
CGT
[ENA]
¡û
>W1710057785
BCBV01000031
Bacteroidota
Porphyromonas gingivalis [BCBV]
78467
78540
+
Thr
CGT
[ENA]
¡û
>W1710601438
FUXH01000003
Bacteroidota
Porphyromonas crevioricanis [FUXH]
72129
72056
-
Thr
CGT
[ENA]
¡û
>W1710602941
FUYQ01000017
Bacteroidota
Parabacteroides chartae [FUYQ]
17375
17300
-
Thr
CGT
[ENA]
¡û
>W1710699639
LBCX01000001
Bacteroidota
Bacteroidales bacterium Barb4 [LBCX]
52825
52898
+
Thr
CGT
[ENA]
¡û
>W1710699714
LBCY01000497
Bacteroidota
Bacteroidales bacterium Barb6 [LBCY]
286
211
-
Thr
CGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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