This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.328815 (8 seq.)
>W1711404425
MFYK01000014
Unclassified
Candidatus Peribacteria bacterium RIFOXYB1_FULL_57_12 [MFYK]
21371
21446
+
Ala
TGC
[ENA]
¡û
>W1711583003
MNWP01000021
Unclassified
Candidatus Peregrinibacteria bacterium CG1_02_54_53 [MNWP]
24008
24083
+
Ala
TGC
[ENA]
¡û
>WENV183686741
ORMF011044414
[ORMF] groundwater metagenome; groundwater
6595
6670
+
Ala
TGC
[ENA]
¢þ
>C161050443
CP013062
Unclassified
Candidatus Peribacter riflensis [CP013062]
766996
767071
+
Ala
TGC
-
¡û
>C161050487
CP013063
Unclassified
Candidatus Peribacter riflensis [CP013063]
767151
767226
+
Ala
TGC
-
¡û
>C161050531
CP013064
Unclassified
Candidatus Peribacter riflensis [CP013064]
767082
767157
+
Ala
TGC
-
¡û
>C161050575
CP013065
Unclassified
Candidatus Peribacter riflensis [CP013065]
766875
766950
+
Ala
TGC
-
¡û
>C161050619
CP013066
Unclassified
Candidatus Peribacter riflensis [CP013066]
767150
767225
+
Ala
TGC
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK