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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.342736 (8 seq.)
>WENV180654739
OCVV010355664
[OCVV] gut metagenome; gut
1733
1806
+
Thr
TGT
[ENA]
¡û
>WENV180654740
OCVV010355664
[OCVV] gut metagenome; gut
1733
1806
+
Thr
TGT
[ENA]
¡û
>WENV180670751
OCVV011305780
[OCVV] gut metagenome; gut
576
651
+
Thr
TGT
[ENA]
¡û
>WENV180670752
OCVV011305780
[OCVV] gut metagenome; gut
576
651
+
Thr
TGT
[ENA]
¡û
>WENV180676336
OCVV011388543
[OCVV] gut metagenome; gut
96
171
+
Thr
TGT
[ENA]
¡û
>WENV180676339
OCVV011388543
[OCVV] gut metagenome; gut
96
171
+
Thr
TGT
[ENA]
¡û
>WENV180681330
OCVV012759611
[OCVV] gut metagenome; gut
171
96
-
Thr
TGT
[ENA]
¡û
>WENV180681333
OCVV012759611
[OCVV] gut metagenome; gut
171
96
-
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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