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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.343027 (8 seq.)
>WENV180659877
OCVV010891311
[OCVV] gut metagenome; gut
495
421
-
Met
CAT
[ENA]
¡û
>WENV180659880
OCVV010891311
[OCVV] gut metagenome; gut
495
421
-
Met
CAT
[ENA]
¡û
>WENV180661571
OCVV011019126
[OCVV] gut metagenome; gut
1241
1167
-
Met
CAT
[ENA]
¡û
>WENV180661573
OCVV011019126
[OCVV] gut metagenome; gut
1241
1167
-
Met
CAT
[ENA]
¡û
>WENV180668271
OCVV011255994
[OCVV] gut metagenome; gut
416
490
+
Met
CAT
[ENA]
¡û
>WENV180668272
OCVV011255994
[OCVV] gut metagenome; gut
416
490
+
Met
CAT
[ENA]
¡û
>WENV180682775
OCVV012830633
[OCVV] gut metagenome; gut
473
548
+
Met
CAT
[ENA]
¡û
>WENV180682776
OCVV012830633
[OCVV] gut metagenome; gut
473
548
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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