This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.369111 (21 seq.)
>W1910857505
NBWZ01000001
Actinomycetota
Subtercola boreus K300 [NBWZ]
2310371
2310445
+
Arg
CCG
[ENA]
¡û
>W1910857558
NBXA01000022
Actinomycetota
Subtercola boreus P27444 [NBXA]
155267
155341
+
Arg
CCG
[ENA]
¡û
>W1910857602
NBXB01000028
Actinomycetota
Subtercola boreus P27479 [NBXB]
158818
158890
+
Arg
CCG
[ENA]
¡û
>W1910857644
NBXC01000018
Actinomycetota
Subtercola boreus P27924 [NBXC]
93440
93514
+
Arg
CCG
[ENA]
¡û
>W1910857687
NBXD01000019
Actinomycetota
Subtercola boreus P27979 [NBXD]
93440
93514
+
Arg
CCG
[ENA]
¡û
>W1910857730
NBXE01000023
Actinomycetota
Subtercola boreus P28004 [NBXE]
93440
93514
+
Arg
CCG
[ENA]
¡û
>W1911798592
QYRT01000025
Actinomycetota
Subtercola vilae DB165 [QYRT]
30257
30183
-
Arg
CCG
[ENA]
¡û
>W1810277328
PSTT01000064
Actinomycetota
Subtercola sp. Z020 [PSTT]
29185
29257
+
Arg
CCG
[ENA]
¡û
>W2010936244
NBWZ01000001
Actinomycetota
Subtercola boreus K300 [NBWZ]
2310371
2310445
+
Arg
CCG
[ENA]
¡û
>W2010936297
NBXA01000022
Actinomycetota
Subtercola boreus P27444 [NBXA]
155267
155341
+
Arg
CCG
[ENA]
¡û
>W2010936341
NBXB01000028
Actinomycetota
Subtercola boreus P27479 [NBXB]
158818
158890
+
Arg
CCG
[ENA]
¡û
>W2010936383
NBXC01000018
Actinomycetota
Subtercola boreus P27924 [NBXC]
93440
93514
+
Arg
CCG
[ENA]
¡û
>W2010936426
NBXD01000019
Actinomycetota
Subtercola boreus P27979 [NBXD]
93440
93514
+
Arg
CCG
[ENA]
¡û
>W2010936469
NBXE01000023
Actinomycetota
Subtercola boreus P28004 [NBXE]
93440
93514
+
Arg
CCG
[ENA]
¡û
>W2011343560
QYRT01000025
Actinomycetota
Subtercola vilae DB165 [QYRT]
30257
30183
-
Arg
CCG
[ENA]
¡û
>W2012020571
VFOO01000001
Actinomycetota
Subtercola boreus DSM 13056 [VFOO]
851126
851052
-
Arg
CCG
[ENA]
¡û
>W2110024092
BMGP01000003
Actinomycetota
Subtercola lobariae CGMCC 1.12976 [BMGP]
332222
332296
+
Arg
CCG
[ENA]
¡û
>W2110201581
JACDTW010000001
Actinomycetota
Subtercola lobariae 9583b [JACDTW]
1114668
1114594
-
Arg
CCG
[ENA]
¡û
>W2110458172
JAFBBU010000001
Actinomycetota
Subtercola frigoramans DSM 13057 [JAFBBU]
1627518
1627444
-
Arg
CCG
[ENA]
¡û
>C211346912
CP076547
Actinomycetota
Subtercola sp. PAMC28395 [CP076547]
2797408
2797480
+
Arg
CCG
-
¡û
>C231248218
CP087997
Actinomycetota
Subtercola sp. AK-R2A1-2 [CP087997]
910637
910563
-
Arg
CCG
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK