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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.370977 (188 seq.)
>W1711385720
MEEN01000017
Bacteroidota
Niastella sp. SCN 39-18 [MEEN]
16352
16280
-
Glu
TTC
[ENA]
¡û
>W1711501995
MKSF01000026
Bacteroidota
Bacteroidetes bacterium 47-18 [MKSF]
31098
31026
-
Glu
TTC
[ENA]
¡û
>W1711501996
MKSF01000026
Bacteroidota
Bacteroidetes bacterium 47-18 [MKSF]
25204
25130
-
Glu
TTC
[ENA]
¡û
>W1711501997
MKSF01000026
Bacteroidota
Bacteroidetes bacterium 47-18 [MKSF]
5442
5370
-
Glu
TTC
[ENA]
¡û
>W1711502822
MKTB01000005
Bacteroidota
Bacteroidetes bacterium 43-16 [MKTB]
121031
120959
-
Glu
TTC
[ENA]
¡û
>W1711502844
MKTB01000019
Bacteroidota
Bacteroidetes bacterium 43-16 [MKTB]
28214
28142
-
Glu
TTC
[ENA]
¡û
>W1711503787
MKTX01000015
Bacteroidota
Sphingobacteriales bacterium 39-19 [MKTX]
18249
18177
-
Glu
TTC
[ENA]
¡û
>WENV180041170
LLBZ010057172
[LLBZ] soil metagenome; soil from tomato rhizosphere
330
258
-
Glu
TTC
[ENA]
¡û
>WENV180284054
OBID01012919
[OBID] metagenome; sludge
2217
2145
-
Glu
TTC
[ENA]
¡û
>WENV180297851
OBJA01100384
[OBJA] soil metagenome; sediment, water from around vicinity
482
410
-
Glu
TTC
[ENA]
¡û
>WENV180691794
OCZS010219988
[OCZS] soil metagenome; soil
149
77
-
Glu
TTC
[ENA]
¡û
>WENV181308075
OFIS01000183
[OFIS] sludge metagenome; sludge
60245
60317
+
Glu
TTC
[ENA]
¡û
>WENV181402163
OFTY01000169
[OFTY] sludge metagenome; sludge
24616
24688
+
Glu
TTC
[ENA]
¡û
>WENV183092323
OLKZ01000139
[OLKZ] soil metagenome; soil
1848
1920
+
Glu
TTC
[ENA]
¡û
>WENV183092955
OLLO01000832
[OLLO] soil metagenome; soil
1652
1724
+
Glu
TTC
[ENA]
¡û
>WENV183726957
PJTO01000864
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
2068
1996
-
Glu
TTC
[ENA]
¡û
>WENV183726958
PJTO01000864
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
1957
1882
-
Glu
TTC
[ENA]
¡û
>WENV183728595
PJTQ01000167
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
60435
60507
+
Glu
TTC
[ENA]
¡û
>WENV183728596
PJTQ01000167
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
60546
60621
+
Glu
TTC
[ENA]
¡û
>WENV183734723
PJTZ01050609
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
201
129
-
Glu
TTC
[ENA]
¡û
>WENV183734724
PJTZ01050609
[PJTZ] soil metagenome; Soil enriched (2) on filter paper
89
17
-
Glu
TTC
[ENA]
¡û
>WENV183734893
PJUA01000106
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
60452
60524
+
Glu
TTC
[ENA]
¡û
>WENV183734894
PJUA01000106
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
60563
60638
+
Glu
TTC
[ENA]
¡û
>WENV183736163
PJUC01000078
[PJUC] soil metagenome; Soil enriched on filter paper
60451
60523
+
Glu
TTC
[ENA]
¡û
>WENV183736164
PJUC01000078
[PJUC] soil metagenome; Soil enriched on filter paper
60562
60637
+
Glu
TTC
[ENA]
¡û
>WENV183741851
PJUG01032038
[PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment
12
84
+
Glu
TTC
[ENA]
¡û
>WENV183742870
PJUI01002684
[PJUI] feces metagenome; Chicken feces (2) enriched on wood chips
462
390
-
Glu
TTC
[ENA]
¡û
>WENV183742895
PJUI01005293
[PJUI] feces metagenome; Chicken feces (2) enriched on wood chips
396
324
-
Glu
TTC
[ENA]
¡û
>WENV183743272
PJUJ01000297
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
12668
12596
-
Glu
TTC
[ENA]
¡û
>WENV183743273
PJUJ01000297
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
12559
12484
-
Glu
TTC
[ENA]
¡û
>WENV183744595
PJUL01000022
[PJUL] feces metagenome; Chicken feces enriched on filter paper
230568
230640
+
Glu
TTC
[ENA]
¡û
>WENV183744596
PJUL01000022
[PJUL] feces metagenome; Chicken feces enriched on filter paper
230677
230752
+
Glu
TTC
[ENA]
¡û
>WENV183749238
PPFU01140686
[PPFU] hypolithon metagenome; Antarctic Hypolithon
674
748
+
Glu
TTC
[ENA]
¡û
>WENV170009305
APMI01000062
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
658919
658845
-
Glu
TTC
[ENA]
¡û
>WENV170009610
APMI01000876
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
601516
601590
+
Glu
TTC
[ENA]
¡û
>WENV170010050
APMI01007500
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
5877
5803
-
Glu
TTC
[ENA]
¡û
>WENV170551705
CXWJ01018367
[CXWJ] wastewater metagenome; activated sludge
595
523
-
Glu
TTC
[ENA]
¡û
>WENV170559246
CXWL01115765
[CXWL] groundwater metagenome; biofilm material
417
343
-
Glu
TTC
[ENA]
¡û
>WENV170645756
JPYU01041662
[JPYU] wastewater metagenome; domestic wastewater sediment without any treatment
97
171
+
Glu
TTC
[ENA]
¡û
>WENV170650784
JRYE01019281
[JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO
3597
3523
-
Glu
TTC
[ENA]
¡û
>WENV170680978
LFEF01039598
[LFEF] freshwater metagenome; waterbloom
2209300
2209226
-
Glu
TTC
[ENA]
¡û
>WENV170725523
LSQX01345590
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
25
99
+
Glu
TTC
[ENA]
¡û
>WENV170981260
MWVT01051764
[MWVT] soil metagenome; TG5-1 sample; Antarctic (ecotone) soil
361
289
-
Glu
TTC
[ENA]
¡û
>WENV170981514
MWVT01115738
[MWVT] soil metagenome; TG5-1 sample; Antarctic (ecotone) soil
129
57
-
Glu
TTC
[ENA]
¡û
>WENV170982442
MWVU01101295
[MWVU] soil metagenome; TG1-5 sample; Antarctic (ecotone) soil
145
71
-
Glu
TTC
[ENA]
¡û
>WENV170983161
MWVV01009363
[MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil
2310
2382
+
Glu
TTC
[ENA]
¡û
>WENV170983242
MWVV01014720
[MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil
363
291
-
Glu
TTC
[ENA]
¡û
>WENV170983939
MWVV01125007
[MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil
145
71
-
Glu
TTC
[ENA]
¡û
>WENV170984798
MWVW01000089
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
6451
6525
+
Glu
TTC
[ENA]
¡û
>WENV170984959
MWVW01005372
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
158
84
-
Glu
TTC
[ENA]
¡û
>WENV170985110
MWVW01023372
[MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil
166
92
-
Glu
TTC
[ENA]
¡û
>WENV170985857
MWVX01004799
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
1489
1563
+
Glu
TTC
[ENA]
¡û
>WENV170985934
MWVX01007611
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
408
336
-
Glu
TTC
[ENA]
¡û
>WENV170986070
MWVX01014313
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
1118
1044
-
Glu
TTC
[ENA]
¡û
>WENV170986118
MWVX01016877
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
497
423
-
Glu
TTC
[ENA]
¡û
>WENV170986628
MWVX01058375
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
1065
993
-
Glu
TTC
[ENA]
¡û
>WENV170986734
MWVX01072902
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
198
126
-
Glu
TTC
[ENA]
¡û
>WENV170987463
MWVX01194581
[MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil
322
394
+
Glu
TTC
[ENA]
¡û
>WENV170989798
MWVZ01106391
[MWVZ] soil metagenome; MS6-5 sample; Antarctic (ecotone) soil
389
463
+
Glu
TTC
[ENA]
¡û
>WENV170990464
MWWA01008204
[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil
1280
1206
-
Glu
TTC
[ENA]
¡û
>WENV170991103
MWWA01110932
[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil
245
317
+
Glu
TTC
[ENA]
¡û
>WENV170991897
MWWA01367211
[MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil
274
202
-
Glu
TTC
[ENA]
¡û
>WENV170992333
MWWB01017277
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
779
707
-
Glu
TTC
[ENA]
¡û
>WENV170992907
MWWB01122666
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
575
503
-
Glu
TTC
[ENA]
¡û
>WENV170992917
MWWB01125261
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
467
395
-
Glu
TTC
[ENA]
¡û
>WENV170992919
MWWB01126155
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
186
260
+
Glu
TTC
[ENA]
¡û
>WENV170992961
MWWB01140195
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
99
25
-
Glu
TTC
[ENA]
¡û
>WENV170993630
MWWB01379185
[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
169
95
-
Glu
TTC
[ENA]
¡û
>WENV170994271
MWWD01053837
[MWWD] soil metagenome; MS2-2 sample; Antarctic (ecotone) soil
14
86
+
Glu
TTC
[ENA]
¡û
>WENV170994822
MWWE01062545
[MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil
152
226
+
Glu
TTC
[ENA]
¡û
>WENV170995200
MWWE01202674
[MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil
119
45
-
Glu
TTC
[ENA]
¡û
>WENV170995220
MWWE01211949
[MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil
360
288
-
Glu
TTC
[ENA]
¡û
>WENV170995560
MWWF01021375
[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
403
331
-
Glu
TTC
[ENA]
¡û
>WENV170995620
MWWF01029059
[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
912
838
-
Glu
TTC
[ENA]
¡û
>WENV170995731
MWWF01044925
[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
286
212
-
Glu
TTC
[ENA]
¡û
>WENV170995732
MWWF01044925
[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
74
2
-
Glu
TTC
[ENA]
¡û
>WENV170995815
MWWF01067250
[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
329
255
-
Glu
TTC
[ENA]
¡û
>WENV170995879
MWWF01082340
[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
261
333
+
Glu
TTC
[ENA]
¡û
>WENV170996046
MWWF01127466
[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
448
520
+
Glu
TTC
[ENA]
¡û
>WENV170997036
MWWG01021537
[MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil
73
1
-
Glu
TTC
[ENA]
¡û
>WENV170997052
MWWG01023926
[MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil
802
728
-
Glu
TTC
[ENA]
¡û
>WENV170997169
MWWG01042197
[MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil
171
99
-
Glu
TTC
[ENA]
¡û
>WENV170997837
MWWH01061921
[MWWH] soil metagenome; MG3-2 sample; Antarctic (ecotone) soil
288
362
+
Glu
TTC
[ENA]
¡û
>WENV170998343
MWWJ01006732
[MWWJ] soil metagenome; CN-4 sample; Antarctic (ecotone) soil
1082
1154
+
Glu
TTC
[ENA]
¡û
>WENV170999341
MWWK01028591
[MWWK] soil metagenome; BG12-3 sample; Antarctic (ecotone) soil
123
49
-
Glu
TTC
[ENA]
¡û
>C181090245
CP023777
Bacteroidota
Chitinophaga caeni 13 [CP023777]
2026809
2026737
-
Glu
TTC
-
¡û
>C181090246
CP023777
Bacteroidota
Chitinophaga caeni 13 [CP023777]
2026666
2026594
-
Glu
TTC
-
¡û
>C181090247
CP023777
Bacteroidota
Chitinophaga caeni 13 [CP023777]
2026523
2026451
-
Glu
TTC
-
¡û
>W1911647247
QAJI01000003
Bacteroidota
Taibaiella sp. KBW10 [QAJI]
274096
274024
-
Glu
TTC
[ENA]
¡û
>W1911647248
QAJI01000003
Bacteroidota
Taibaiella sp. KBW10 [QAJI]
273995
273922
-
Glu
TTC
[ENA]
¡û
>W1911741140
QUZZ01000002
Bacteroidota
Taibaiella sp. F-4 [QUZZ]
510030
510102
+
Glu
TTC
[ENA]
¡û
>W1911741155
QUZZ01000006
Bacteroidota
Taibaiella sp. F-4 [QUZZ]
93795
93867
+
Glu
TTC
[ENA]
¡û
>W1911744261
QVNU01000001
Bacteroidota
Taibaiella koreensis THG-DT86 [QVNU]
1488835
1488763
-
Glu
TTC
[ENA]
¡û
>W1911744286
QVNU01000007
Bacteroidota
Taibaiella koreensis THG-DT86 [QVNU]
380600
380672
+
Glu
TTC
[ENA]
¡û
>SRA1002915
SRR002326.100146
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
4
76
+
Glu
TTC
[SRA]
>SRA1003951
SRR002328.57847
The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
91
19
-
Glu
TTC
[SRA]
>W1810393023
PYAW01000001
Bacteroidota
Chitinophaga niastensis DSM 24859 [PYAW]
40123
40051
-
Glu
TTC
[ENA]
¡û
>W1810393024
PYAW01000001
Bacteroidota
Chitinophaga niastensis DSM 24859 [PYAW]
33439
33367
-
Glu
TTC
[ENA]
¡û
>W1810400491
PYGD01000004
Bacteroidota
Taibaiella chishuiensis CGMCC 1.12700 [PYGD]
363925
363997
+
Glu
TTC
[ENA]
¡û
>W1810400503
PYGD01000008
Bacteroidota
Taibaiella chishuiensis CGMCC 1.12700 [PYGD]
233003
232931
-
Glu
TTC
[ENA]
¡û
>W1810586437
QFFJ01000001
Bacteroidota
Chitinophaga flava GDMCC 1.1325 [QFFJ]
3985648
3985720
+
Glu
TTC
[ENA]
¡û
>W1810586438
QFFJ01000001
Bacteroidota
Chitinophaga flava GDMCC 1.1325 [QFFJ]
3986810
3986882
+
Glu
TTC
[ENA]
¡û
>W1810693514
QLLL01000005
Bacteroidota
Chitinophaga skermanii DSM 23857 [QLLL]
570196
570124
-
Glu
TTC
[ENA]
¡û
>W1810693515
QLLL01000005
Bacteroidota
Chitinophaga skermanii DSM 23857 [QLLL]
570063
569991
-
Glu
TTC
[ENA]
¡û
>W1810694444
QLMA01000002
Bacteroidota
Chitinophaga dinghuensis DSM 29821 [QLMA]
846362
846434
+
Glu
TTC
[ENA]
¡û
>W1810694445
QLMA01000002
Bacteroidota
Chitinophaga dinghuensis DSM 29821 [QLMA]
848678
848750
+
Glu
TTC
[ENA]
¡û
>W1810695405
QLNL01000008
Bacteroidota
Chitinophaga ginsengisegetis 28_1 [QLNL]
275414
275486
+
Glu
TTC
[ENA]
¡û
>W1810695406
QLNL01000008
Bacteroidota
Chitinophaga ginsengisegetis 28_1 [QLNL]
283699
283771
+
Glu
TTC
[ENA]
¡û
>W1810721966
QNTR01000008
Bacteroidota
Chitinophaga arvensicola 10_5 24_1 [QNTR]
40887
40815
-
Glu
TTC
[ENA]
¡û
>W1810721967
QNTR01000008
Bacteroidota
Chitinophaga arvensicola 10_5 24_1 [QNTR]
32602
32530
-
Glu
TTC
[ENA]
¡û
>W1810762403
QPMM01000017
Bacteroidota
Chitinophaga silvatica GDMCC 1.1288 [QPMM]
40265
40193
-
Glu
TTC
[ENA]
¡û
>W1810762404
QPMM01000017
Bacteroidota
Chitinophaga silvatica GDMCC 1.1288 [QPMM]
30002
29930
-
Glu
TTC
[ENA]
¡û
>W2010106721
BKAT01000021
Bacteroidota
Chitinophaga terrae Kim and Jung 2007 NBRC 109751 [BKAT]
40922
40848
-
Glu
TTC
[ENA]
¡û
>W2010106722
BKAT01000021
Bacteroidota
Chitinophaga terrae Kim and Jung 2007 NBRC 109751 [BKAT]
32004
31932
-
Glu
TTC
[ENA]
¡û
>W2010169476
CABFVU010000002
Bacteroidota
Chitinophaga polysaccharea CSUR P9684 [CABFVU]
230466
230538
+
Glu
TTC
[ENA]
¡û
>W2010169477
CABFVU010000002
Bacteroidota
Chitinophaga polysaccharea CSUR P9684 [CABFVU]
239512
239584
+
Glu
TTC
[ENA]
¡û
>W2010213367
CABHMS010000011
Bacteroidota
Chitinophaga sp. BD 01 [CABHMS]
30913
30841
-
Glu
TTC
[ENA]
¡û
>W2010213368
CABHMS010000011
Bacteroidota
Chitinophaga sp. BD 01 [CABHMS]
30686
30614
-
Glu
TTC
[ENA]
¡û
>W2010213425
CABHMT010000021
Bacteroidota
Chitinophaga sp. VP 7442 [CABHMT]
279569
279497
-
Glu
TTC
[ENA]
¡û
>W2010213426
CABHMT010000021
Bacteroidota
Chitinophaga sp. VP 7442 [CABHMT]
279342
279270
-
Glu
TTC
[ENA]
¡û
>W2010445845
JAABOK010000006
Bacteroidota
Chitinophaga sp. O9 [JAABOK]
39293
39221
-
Glu
TTC
[ENA]
¡û
>W2010445846
JAABOK010000006
Bacteroidota
Chitinophaga sp. O9 [JAABOK]
37491
37419
-
Glu
TTC
[ENA]
¡û
>W2010585531
JABAIA010000001
Bacteroidota
Chitinophaga varians Ae27 [JABAIA]
3528073
3528145
+
Glu
TTC
[ENA]
¡û
>W2010585532
JABAIA010000001
Bacteroidota
Chitinophaga varians Ae27 [JABAIA]
3529834
3529906
+
Glu
TTC
[ENA]
¡û
>W2010586279
JABAOB010000006
Bacteroidota
Chitinophaga sp. Ak27 [JABAOB]
543575
543647
+
Glu
TTC
[ENA]
¡û
>W2010586306
JABAOB010000015
Bacteroidota
Chitinophaga sp. Ak27 [JABAOB]
9577
9649
+
Glu
TTC
[ENA]
¡û
>W2011235231
QAJI01000003
Bacteroidota
Taibaiella sp. KBW10 [QAJI]
274096
274024
-
Glu
TTC
[ENA]
¡û
>W2011235232
QAJI01000003
Bacteroidota
Taibaiella sp. KBW10 [QAJI]
273995
273922
-
Glu
TTC
[ENA]
¡û
>W2011306522
QUZZ01000002
Bacteroidota
Taibaiella sp. F-4 [QUZZ]
510030
510102
+
Glu
TTC
[ENA]
¡û
>W2011306537
QUZZ01000006
Bacteroidota
Taibaiella sp. F-4 [QUZZ]
93795
93867
+
Glu
TTC
[ENA]
¡û
>W2011308989
QVNU01000001
Bacteroidota
Taibaiella koreensis THG-DT86 [QVNU]
1488835
1488763
-
Glu
TTC
[ENA]
¡û
>W2011309014
QVNU01000007
Bacteroidota
Taibaiella koreensis THG-DT86 [QVNU]
380600
380672
+
Glu
TTC
[ENA]
¡û
>W2011429031
RIAR02000001
Bacteroidota
Chitinophaga sp. Mgbs1 [RIAR]
6526936
6527008
+
Glu
TTC
[ENA]
¡û
>W2011429032
RIAR02000001
Bacteroidota
Chitinophaga sp. Mgbs1 [RIAR]
6528370
6528442
+
Glu
TTC
[ENA]
¡û
>W2011524246
SAIQ01000001
Bacteroidota
Chitinophagaceae bacterium HME-24 [SAIQ]
276008
275934
-
Glu
TTC
[ENA]
¡û
>W2011524247
SAIQ01000001
Bacteroidota
Chitinophagaceae bacterium HME-24 [SAIQ]
275906
275834
-
Glu
TTC
[ENA]
¡û
>W2011544623
SDHW01000012
Bacteroidota
Lacibacter sp. TTM-7 [SDHW]
1078
1006
-
Glu
TTC
[ENA]
¡û
>W2011652394
SNZS01000002
Bacteroidota
Chitinophaga sp. OK723 [SNZS]
178
106
-
Glu
TTC
[ENA]
¡û
>W2011652436
SNZS01000027
Bacteroidota
Chitinophaga sp. OK723 [SNZS]
9961
10033
+
Glu
TTC
[ENA]
¡û
>W2012048631
VIWO01000001
Bacteroidota
Chitinophaga polysaccharea 1209 [VIWO]
39437
39365
-
Glu
TTC
[ENA]
¡û
>W2012048632
VIWO01000001
Bacteroidota
Chitinophaga polysaccharea 1209 [VIWO]
29883
29811
-
Glu
TTC
[ENA]
¡û
>W2012082451
VLLE01000004
Bacteroidota
Lacibacter cauensis CGMCC 1.7271 [VLLE]
16732
16804
+
Glu
TTC
[ENA]
¡û
>W2012202875
VWWO01000001
Bacteroidota
Chitinophaga sp. Cy-1792 [VWWO]
35743
35815
+
Glu
TTC
[ENA]
¡û
>W2012202907
VWWO01000001
Bacteroidota
Chitinophaga sp. Cy-1792 [VWWO]
39963
39891
-
Glu
TTC
[ENA]
¡û
>W2012208577
VYQF01000001
Bacteroidota
Chitinophagaceae bacterium BR5-29 [VYQF]
1337434
1337360
-
Glu
TTC
[ENA]
¡û
>W2012349116
WJFD01000004
Bacteroidota
Chitinophaga sp. SYP-B3965 [WJFD]
550681
550607
-
Glu
TTC
[ENA]
¡û
>W2012349117
WJFD01000004
Bacteroidota
Chitinophaga sp. SYP-B3965 [WJFD]
457468
457394
-
Glu
TTC
[ENA]
¡û
>W2110269427
JACVFB010000002
Bacteroidota
Chitinophaga varians KACC 19415 [JACVFB]
36330
36258
-
Glu
TTC
[ENA]
¡û
>W2110269428
JACVFB010000002
Bacteroidota
Chitinophaga varians KACC 19415 [JACVFB]
34556
34484
-
Glu
TTC
[ENA]
¡û
>W2110269507
JACVFC010000004
Bacteroidota
Chitinophaga qingshengii JCM 30026 [JACVFC]
600805
600877
+
Glu
TTC
[ENA]
¡û
>W2110269508
JACVFC010000004
Bacteroidota
Chitinophaga qingshengii JCM 30026 [JACVFC]
608353
608425
+
Glu
TTC
[ENA]
¡û
>W2110426509
JAELUL010000031
Bacteroidota
Chitinophaga sp. ASV3 [JAELUL]
34174
34102
-
Glu
TTC
[ENA]
¡û
>W2110426510
JAELUL010000031
Bacteroidota
Chitinophaga sp. ASV3 [JAELUL]
31869
31797
-
Glu
TTC
[ENA]
¡û
>W2110575347
JAGTXB010000032
Bacteroidota
Chitinophaga sp. 2R12 [JAGTXB]
36404
36332
-
Glu
TTC
[ENA]
¡û
>W2110575348
JAGTXB010000032
Bacteroidota
Chitinophaga sp. 2R12 [JAGTXB]
30254
30182
-
Glu
TTC
[ENA]
¡û
>W2110649244
JAHUWJ010000016
Bacteroidota
Chitinophaga sp. sic0106 [JAHUWJ]
33331
33259
-
Glu
TTC
[ENA]
¡û
>W2110649245
JAHUWJ010000016
Bacteroidota
Chitinophaga sp. sic0106 [JAHUWJ]
30130
30058
-
Glu
TTC
[ENA]
¡û
>C201306227
CP060007
Bacteroidota
Lacibacter sp. S13-6-6 [CP060007]
853248
853176
-
Glu
TTC
-
¡û
>C201307659
LR632928
Bacteroidota
Chitinophaga pinensis [LR632928, LR632929, LR632930]
6334545
6334471
-
Glu
TTC
-
¡û
>C201307712
LR632929
Bacteroidota
Chitinophaga pinensis [LR632928, LR632929, LR632930]
6334786
6334712
-
Glu
TTC
-
¡û
>C201307732
LR632930
Bacteroidota
Chitinophaga pinensis [LR632928, LR632929, LR632930]
19799
19873
+
Glu
TTC
-
¡û
>C211198436
CP065012
Bacteroidota
Chitinophagaceae bacterium [CP065012]
2438166
2438238
+
Glu
TTC
-
¡û
>C211325022
CP073766
Bacteroidota
Chitinophaga sp. KRA15-503 [CP073766]
4491585
4491513
-
Glu
TTC
-
¡û
>C211325023
CP073766
Bacteroidota
Chitinophaga sp. KRA15-503 [CP073766]
4490573
4490501
-
Glu
TTC
-
¡û
>C211401702
CP083388
Bacteroidota
Ferruginibacter sp. KIS38-8 [CP083388]
3206373
3206445
+
Glu
TTC
-
¡û
>C231156259
CP077769
Bacteroidota
Chitinophaga sp. MD30B [CP077769]
5606013
5606085
+
Glu
TTC
-
¡û
>C231156260
CP077769
Bacteroidota
Chitinophaga sp. MD30B [CP077769]
5606145
5606217
+
Glu
TTC
-
¡û
>C231220689
CP086063
Bacteroidota
Ferruginibacter lapsinanis KACC 15035 [CP086063]
376748
376820
+
Glu
TTC
-
¡û
>C231507263
CP107006
Bacteroidota
Chitinophaga sp. R8 [CP107006]
6213043
6212971
-
Glu
TTC
-
¡û
>C231507264
CP107006
Bacteroidota
Chitinophaga sp. R8 [CP107006]
6186666
6186594
-
Glu
TTC
-
¡û
>W2110776319
VOSI01000004
Bacteroidota
Edaphocola aurantiacus H2 [VOSI]
342918
342992
+
Glu
TTC
[ENA]
¡û
>W2110776320
VOSI01000004
Bacteroidota
Edaphocola aurantiacus H2 [VOSI]
343020
343092
+
Glu
TTC
[ENA]
¡û
>C241149297
CP051204
Bacteroidota
Chitinophaga oryzae 1303 [CP051204]
7833291
7833219
-
Glu
TTC
-
¡û
>C241149298
CP051204
Bacteroidota
Chitinophaga oryzae 1303 [CP051204]
7832008
7831936
-
Glu
TTC
-
¡û
>C241149369
CP051205
Bacteroidota
Chitinophaga oryzae 1310 [CP051205]
5822643
5822571
-
Glu
TTC
-
¡û
>C241149370
CP051205
Bacteroidota
Chitinophaga oryzae 1310 [CP051205]
5821360
5821288
-
Glu
TTC
-
¡û
>W1710533837
FNRL01000002
Bacteroidota
Chitinophaga terrae (ex Kim and Jung 2007) Kim and Jung 2007 [FNRL]
415266
415340
+
Glu
TTC
[ENA]
¡û
>W1710533838
FNRL01000002
Bacteroidota
Chitinophaga terrae (ex Kim and Jung 2007) Kim and Jung 2007 [FNRL]
424184
424258
+
Glu
TTC
[ENA]
¡û
>W1710555302
FOJG01000001
Bacteroidota
Chitinophaga arvensicola [FOJG]
43686
43612
-
Glu
TTC
[ENA]
¡û
>W1710555303
FOJG01000001
Bacteroidota
Chitinophaga arvensicola [FOJG]
30756
30682
-
Glu
TTC
[ENA]
¡û
>W1710591044
FRBL01000007
Bacteroidota
Chitinophaga jiangningensis [FRBL]
32818
32744
-
Glu
TTC
[ENA]
¡û
>W1710591045
FRBL01000007
Bacteroidota
Chitinophaga jiangningensis [FRBL]
29613
29539
-
Glu
TTC
[ENA]
¡û
>W1710594123
FSRA01000002
Bacteroidota
Chitinophaga niabensis [FSRA]
18684
18758
+
Glu
TTC
[ENA]
¡û
>W1710594124
FSRA01000002
Bacteroidota
Chitinophaga niabensis [FSRA]
124867
124941
+
Glu
TTC
[ENA]
¡û
>W1710601083
FUWZ01000002
Bacteroidota
Chitinophaga eiseniae [FUWZ]
2133557
2133631
+
Glu
TTC
[ENA]
¡û
>W1710601084
FUWZ01000002
Bacteroidota
Chitinophaga eiseniae [FUWZ]
2135420
2135494
+
Glu
TTC
[ENA]
¡û
>W1710604545
FUZZ01000007
Bacteroidota
Chitinophaga ginsengisegetis [FUZZ]
95982
96056
+
Glu
TTC
[ENA]
¡û
>W1710604546
FUZZ01000007
Bacteroidota
Chitinophaga ginsengisegetis [FUZZ]
101510
101584
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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