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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
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1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.37221 (81 seq.)
>W1711120588
LUGK01000042
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [LUGK]
2036
1949
-
Leu
TAA
[ENA]
¡û
>W1711167814
LVWX01000037
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [LVWX]
4014
4101
+
Leu
TAA
[ENA]
¡û
>W1711167902
LVWY01000042
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [LVWY]
1150
1063
-
Leu
TAA
[ENA]
¡û
>W1711185010
LWNA01000018
Bacillota
Lactobacillus sp. HMSC08B12 [LWNA]
1160
1073
-
Leu
TAA
[ENA]
¡û
>W131204346
ATBQ01000223
Bacillota
Lactobacillus delbrueckii subsp. lactis CRL581 [ATBQ]
18548
18461
-
Leu
TAA
[ENA]
¡û
>W1711665847
MRBF01000001
Bacillota
Lactobacillus delbrueckii subsp. lactis [MRBF]
37344
37431
+
Leu
TAA
[ENA]
¡û
>W1711665905
MRBF01000002
Bacillota
Lactobacillus delbrueckii subsp. lactis [MRBF]
2216354
2216267
-
Leu
TAA
[ENA]
¡û
>W1711665969
MRBF01000003
Bacillota
Lactobacillus delbrueckii subsp. lactis [MRBF]
6797
6710
-
Leu
TAA
[ENA]
¡û
>W1711678807
MRUN01000012
Bacillota
Lactobacillus delbrueckii subsp. lactis DSM 20072 [MRUN]
1315450
1315363
-
Leu
TAA
[ENA]
¡û
>C171048676
CP016393
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus ND04 [CP016393]
1233657
1233744
+
Leu
TAA
-
¡û
>C171074186
CP018156
Bacillota
Lactobacillus delbrueckii subsp. lactis KCTC 3035 [CP018156]
1896372
1896459
+
Leu
TAA
-
¡û
>C171075465
CP018215
Bacillota
Lactobacillus delbrueckii subsp. lactis KCCM 34717 [CP018215]
25772
25859
+
Leu
TAA
-
¡û
>C171075592
CP018216
Bacillota
Lactobacillus delbrueckii subsp. delbrueckii KCTC 13731 [CP018216]
1578794
1578707
-
Leu
TAA
-
¡û
>C171075685
CP018217
Bacillota
Lactobacillus delbrueckii subsp. sunkii JCM 17838 [CP018217]
1663174
1663087
-
Leu
TAA
-
¡û
>C171075771
CP018218
Bacillota
Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 [CP018218]
1884657
1884570
-
Leu
TAA
-
¡û
>C171075835
CP018218
Bacillota
Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 [CP018218]
59349
59262
-
Leu
TAA
-
¡û
>C171081347
CP018614
Bacillota
Lactobacillus delbrueckii subsp. indicus JCM 15610 [CP018614]
1632851
1632764
-
Leu
TAA
-
¡û
>C171089433
CP019120
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus DSM 20080 [CP019120]
1571261
1571174
-
Leu
TAA
-
¡û
>C171116233
CP021136
Bacillota
Lactobacillus delbrueckii subsp. delbrueckii TUA4408L [CP021136]
710241
710154
-
Leu
TAA
-
¡û
>C011389
CR954253
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 [CR954253]
1567969
1567884
-
Leu
TAA
[Ensembl]
¡û
>C011542
CP000412
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 [CP000412]
1586679
1586594
-
Leu
TAA
[Ensembl]
¡û
>W141037890
ALPY01000026
Bacillota
Lactobacillus delbrueckii ZN7a-9 [ALPY]
8222
8309
+
Leu
TAA
[ENA]
¡û
>W141228029
BALP01000056
Bacillota
Lactobacillus delbrueckii subsp. delbrueckii JCM 1012 [BALP]
1130
1043
-
Leu
TAA
[ENA]
¡û
>W141246035
CALZ01000028
Bacillota
Lactobacillus equicursoris 66c [CALZ]
2245
2334
+
Leu
TAA
[ENA]
¡û
>W141264097
CCDV01000001
Bacillota
Lactobacillus delbrueckii subsp. lactis [CCDV]
1772963
1772876
-
Leu
TAA
[ENA]
¡û
>W141264967
CCET01000010
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [CCET]
4020
4107
+
Leu
TAA
[ENA]
¡û
>W141265049
CCEU01000010
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [CCEU]
4007
4094
+
Leu
TAA
[ENA]
¡û
>WENV183124289
OLNW01009804
[OLNW] human gut metagenome; faeces
1186
1099
-
Leu
TAA
[ENA]
¢þ
>WENV183178204
OLPG01042197
[OLPG] human gut metagenome; faeces
229
142
-
Leu
TAA
[ENA]
¢þ
>C181024978
CP017235
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus L99 [CP017235]
1565974
1565887
-
Leu
TAA
-
¡û
>C181074491
CP022988
Bacillota
Lactobacillus delbrueckii subsp. lactis DSM 20072 [CP022988]
386161
386248
+
Leu
TAA
-
¡û
>C181076055
CP023139
Bacillota
Lactobacillus delbrueckii subsp. lactis KCTC 3034 [CP023139]
1838703
1838616
-
Leu
TAA
-
¡û
>C181221086
LT899687
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [LT899687]
1572531
1572444
-
Leu
TAA
-
¡û
>C191063422
CP029250
Bacillota
Lactobacillus delbrueckii [CP029250]
1886686
1886599
-
Leu
TAA
-
¡û
>C191089975
CP032451
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus KLDS1.0207 [CP032451]
1255996
1256083
+
Leu
TAA
-
¡û
>C191224699
LS991409
Bacillota
Lactobacillus delbrueckii subsp. lactis [LS991409]
1698259
1698172
-
Leu
TAA
-
¡û
>W09101798
AAGQ01000092
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 [AAGQ]
929
842
-
Leu
TAA
[ENA]
¡û
>W1910180861
BJLK01000045
Bacillota
Lactobacillus delbrueckii subsp. lactis NBRC 3376 [BJLK]
9197
9284
+
Leu
TAA
[ENA]
¡û
>W1910180916
BJLM01000046
Bacillota
Lactobacillus delbrueckii subsp. delbrueckii NBRC 3534 [BJLM]
1130
1043
-
Leu
TAA
[ENA]
¡û
>W1910181008
BJLO01000166
Bacillota
Lactobacillus delbrueckii subsp. lactis NBRC 3734 [BJLO]
955
868
-
Leu
TAA
[ENA]
¡û
>W1910182512
BJMY01000056
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus NBRC 13953 [BJMY]
2035
1948
-
Leu
TAA
[ENA]
¡û
>W1910186301
CCDS01000014
Bacillota
Lactobacillus delbrueckii subsp. lactis [CCDS]
9459
9546
+
Leu
TAA
[ENA]
¡û
>W1910186391
CCDT01000008
Bacillota
Lactobacillus delbrueckii subsp. lactis [CCDT]
9228
9315
+
Leu
TAA
[ENA]
¡û
>W1910186451
CCDU01000022
Bacillota
Lactobacillus delbrueckii subsp. lactis [CCDU]
9531
9618
+
Leu
TAA
[ENA]
¡û
>W1911631556
PUFG01000021
Bacillota
Lactobacillus delbrueckii subsp. jakobsenii DSM 26046 [PUFG]
8406
8493
+
Leu
TAA
[ENA]
¡û
>W1911702082
QNXB01000030
Bacillota
Lactobacillus delbrueckii TJA31 [QNXB]
1207
1120
-
Leu
TAA
[ENA]
¡û
>W1810000522
BEWJ01000049
Bacillota
Lactobacillus delbrueckii subsp. delbrueckii NBRC 3202 [BEWJ]
9189
9276
+
Leu
TAA
[ENA]
¡û
>W1810190904
PKKE01000023
Bacillota
Lactobacillus delbrueckii UMB0003 [PKKE]
24148
24061
-
Leu
TAA
[ENA]
¡û
>W1810445148
PZKI01000039
Bacillota
Lactobacillus delbrueckii AVK [PZKI]
4368
4455
+
Leu
TAA
[ENA]
¡û
>W1810744689
QOVB01000034
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus MBT 92059 [QOVB]
1341
1254
-
Leu
TAA
[ENA]
¡û
>W10124012
AEAT01000045
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 [AEAT]
9189
9276
+
Leu
TAA
[ENA]
¡û
>C11112438
CP000156
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus 2038 [CP000156]
798072
798159
+
Leu
TAA
[Ensembl]
¡û
>C11112558
CP002341
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus ND02 [CP002341]
1770490
1770403
-
Leu
TAA
[Ensembl]
¡û
>W11130849
AEAT01000045
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 [AEAT]
9189
9276
+
Leu
TAA
[ENA]
¡û
>W1511510275
JXRV01000040
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus CRL871 [JXRV]
60496
60409
-
Leu
TAA
[ENA]
¡û
>W1511510366
JXRV01000531
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus CRL871 [JXRV]
87
174
+
Leu
TAA
[ENA]
¡û
>W11152214
AEXU01000060
Bacillota
Lactobacillus delbrueckii subsp. lactis DSM 20072 [AEXU]
2028
1941
-
Leu
TAA
[ENA]
¡û
>W1511694274
LGAS01000049
Bacillota
Lactobacillus delbrueckii subsp. indicus JCM 15610 [LGAS]
14544
14457
-
Leu
TAA
[ENA]
¡û
>W1511698325
LGHR01000023
Bacillota
Lactobacillus delbrueckii subsp. sunkii JCM 17838 [LGHR]
2174
2087
-
Leu
TAA
[ENA]
¡û
>C161057589
CP013610
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus MN-BM-F01 [CP013610]
1598856
1598769
-
Leu
TAA
[Ensembl]
¡û
>W121009790
AGFO01000044
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1632 [AGFO]
3991
4078
+
Leu
TAA
[ENA]
¡û
>W121010023
AGHW01000005
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1519 [AGHW]
3969
4056
+
Leu
TAA
[ENA]
¡û
>W1610033111
AZCR01000060
Bacillota
Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 [AZCR]
1211
1124
-
Leu
TAA
[ENA]
¡û
>W1610034493
AZDU01000011
Bacillota
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]
37773
37684
-
Leu
TAA
[ENA]
¡û
>W1610036672
AZFL01000107
Bacillota
Lactobacillus delbrueckii subsp. indicus DSM 15996 [AZFL]
8346
8433
+
Leu
TAA
[ENA]
¡û
>W1610044431
BBAN01000052
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 [BBAN]
3748
3835
+
Leu
TAA
[ENA]
¡û
>W1610045846
BBBW01000058
Bacillota
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]
1156
1067
-
Leu
TAA
[ENA]
¡û
>W1610120900
CZPS01000032
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [CZPS]
4278
4365
+
Leu
TAA
[ENA]
¡û
>W1610502780
FLLT01000006
Bacillota
Lactobacillus delbrueckii [FLLT]
821778
821690
-
Leu
TAA
[ENA]
¡û
>W1610527982
JQAV01000042
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 DSM 20081 [JQAV]
2152
2065
-
Leu
TAA
[ENA]
¡û
>W1610529680
JQCG01000040
Bacillota
Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 [JQCG]
1362
1275
-
Leu
TAA
[ENA]
¡û
>W1610931785
LUGK01000042
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [LUGK]
2036
1949
-
Leu
TAA
[ENA]
¡û
>W1610977883
LVWX01000037
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [LVWX]
4014
4101
+
Leu
TAA
[ENA]
¡û
>W1610977971
LVWY01000042
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [LVWY]
1150
1063
-
Leu
TAA
[ENA]
¡û
>W1710030383
AZCR01000060
Bacillota
Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 [AZCR]
1211
1124
-
Leu
TAA
[ENA]
¡û
>W1710031620
AZDU01000011
Bacillota
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [AZDU]
37773
37684
-
Leu
TAA
[ENA]
¡û
>W1710033711
AZFL01000107
Bacillota
Lactobacillus delbrueckii subsp. indicus DSM 15996 [AZFL]
8346
8433
+
Leu
TAA
[ENA]
¡û
>W1710042687
BBBW01000058
Bacillota
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 [BBBW]
1156
1067
-
Leu
TAA
[ENA]
¡û
>W1710123604
CZPS01000032
Bacillota
Lactobacillus delbrueckii subsp. bulgaricus [CZPS]
4278
4365
+
Leu
TAA
[ENA]
¡û
>W1710496179
FLLT01000006
Bacillota
Lactobacillus delbrueckii [FLLT]
821778
821690
-
Leu
TAA
[ENA]
¡û
>W1710631270
JQCG01000040
Bacillota
Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 [JQCG]
1362
1275
-
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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