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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.38384 (9 seq.)
>WENV170563565
CZCB01021575
[CZCB] anaerobic digester metagenome; anaerobic digester
443
355
-
Leu
TAA
[ENA]
¢þ
>WENV170563568
CZCB01021575
[CZCB] anaerobic digester metagenome; anaerobic digester
171
86
-
Leu
TAA
[ENA]
¢þ
>C191184268
CP040924
Bacillota
Clostridium thermarum SYSU GA15002 [CP040924]
3432519
3432431
-
Leu
TAA
-
¡û
>C191184271
CP040924
Bacillota
Clostridium thermarum SYSU GA15002 [CP040924]
3432242
3432154
-
Leu
TAA
-
¡û
>C191222105
LR590481
Bacillota
Hathewaya histolytica NCTC503 [LR590481]
2495389
2495301
-
Leu
TAA
-
¡û
>C191222108
LR590481
Bacillota
Hathewaya histolytica NCTC503 [LR590481]
2495018
2494930
-
Leu
TAA
-
¡û
>C191222111
LR590481
Bacillota
Hathewaya histolytica NCTC503 [LR590481]
2494752
2494664
-
Leu
TAA
-
¡û
>W1510060475
CCXI01000128
Bacillota
Clostridium polynesiense MS1 [CCXI]
20020
19932
-
Leu
TAA
[ENA]
¡û
>W1510060477
CCXI01000128
Bacillota
Clostridium polynesiense MS1 [CCXI]
19748
19660
-
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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