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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.384950 (4 seq.)
>W1910735275
MHLK01000056
Unclassified
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_50_11 [MHLK]
12024
12096
+
Ile
TAT
[ENA]
¡û
>W1910735459
MHLP01000033
Unclassified
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20 [MHLP]
12146
12218
+
Ile
TAT
[ENA]
¡û
>W2010868705
MHLK01000056
Unclassified
Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_02_FULL_50_11 [MHLK]
12024
12096
+
Ile
TAT
[ENA]
¡û
>W2010868889
MHLP01000033
Unclassified
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20 [MHLP]
12146
12218
+
Ile
TAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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