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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.388940 (124 seq.)
>WENV180202039
OBAF01074202
[OBAF] human gut metagenome; human gut
372
298
-
Glu
CTC
[ENA]
¡û
>WENV180216205
OBAQ01037195
[OBAQ] human gut metagenome; human gut
68
142
+
Glu
CTC
[ENA]
¡û
>WENV180286585
OBII01004214
[OBII] human gut metagenome; feces
1475
1401
-
Glu
CTC
[ENA]
¡û
>WENV180322499
OBKR01003128
[OBKR] human gut metagenome; feces
4604
4530
-
Glu
CTC
[ENA]
¡û
>WENV180609232
OCPV01000544
[OCPV] human gut metagenome; human gut
3290
3216
-
Glu
CTC
[ENA]
¡û
>WENV181034921
ODXO01005600
[ODXO] human metagenome; G_DNA_Stool
3581
3655
+
Glu
CTC
[ENA]
¡û
>WENV181127413
OEFW01003763
[OEFW] human metagenome; G_DNA_Stool
3294
3220
-
Glu
CTC
[ENA]
¡û
>WENV181419439
OGCN01000121
[OGCN] human gut metagenome; human gut
95227
95301
+
Glu
CTC
[ENA]
¡û
>WENV181425810
OGCQ01001194
[OGCQ] human gut metagenome; human gut
9396
9322
-
Glu
CTC
[ENA]
¡û
>WENV181481875
OGFJ01000151
[OGFJ] metagenome; Human gut stool
23548
23622
+
Glu
CTC
[ENA]
¡û
>WENV181528376
OGHL01000229
[OGHL] metagenome; Human gut stool
23292
23366
+
Glu
CTC
[ENA]
¡û
>WENV181598952
OGLB01012333
[OGLB] metagenome; Human gut stool
1930
2004
+
Glu
CTC
[ENA]
¡û
>WENV181640600
OGNF01000157
[OGNF] metagenome; Human gut stool
48453
48527
+
Glu
CTC
[ENA]
¡û
>WENV181650431
OGNU01002127
[OGNU] metagenome; Human gut stool
1018
944
-
Glu
CTC
[ENA]
¡û
>WENV181774915
OGRF01000244
[OGRF] human gut metagenome; faeces
49109
49183
+
Glu
CTC
[ENA]
¡û
>WENV181828960
OGUN01003581
[OGUN] human gut metagenome; faeces
2892
2818
-
Glu
CTC
[ENA]
¡û
>WENV181859126
OGWQ01000156
[OGWQ] human gut metagenome; faeces
22434
22508
+
Glu
CTC
[ENA]
¡û
>WENV181910554
OGYC01017271
[OGYC] human gut metagenome; faeces
217
291
+
Glu
CTC
[ENA]
¡û
>WENV181947456
OGZD01005766
[OGZD] human gut metagenome; faeces
1577
1651
+
Glu
CTC
[ENA]
¡û
>WENV181947909
OGZE01000027
[OGZE] human gut metagenome; faeces
24291
24365
+
Glu
CTC
[ENA]
¡û
>WENV181973957
OHAB01000913
[OHAB] human gut metagenome; faeces
1837
1763
-
Glu
CTC
[ENA]
¡û
>WENV181987700
OHAN01000761
[OHAN] human gut metagenome; faeces
2022
2096
+
Glu
CTC
[ENA]
¡û
>WENV181989143
OHAO01003545
[OHAO] human gut metagenome; faeces
5331
5405
+
Glu
CTC
[ENA]
¡û
>WENV182004159
OHBD01015546
[OHBD] human gut metagenome; feces
38
112
+
Glu
CTC
[ENA]
¡û
>WENV182013057
OHBN01004926
[OHBN] human gut metagenome; feces
986
1060
+
Glu
CTC
[ENA]
¡û
>WENV182026199
OHCK01001299
[OHCK] human gut metagenome; feces
4164
4090
-
Glu
CTC
[ENA]
¡û
>WENV182032284
OHCU01001697
[OHCU] human gut metagenome; feces
3752
3826
+
Glu
CTC
[ENA]
¡û
>WENV182039710
OHDG01001531
[OHDG] human gut metagenome; feces
221
147
-
Glu
CTC
[ENA]
¡û
>WENV182052608
OHEH01011318
[OHEH] human gut metagenome; feces
569
495
-
Glu
CTC
[ENA]
¡û
>WENV182056702
OHEN01002814
[OHEN] human gut metagenome; feces
1672
1598
-
Glu
CTC
[ENA]
¡û
>WENV182058092
OHEP01002525
[OHEP] human gut metagenome; feces
351
277
-
Glu
CTC
[ENA]
¡û
>WENV182065465
OHFA01005154
[OHFA] human gut metagenome; feces
929
1003
+
Glu
CTC
[ENA]
¡û
>WENV182068973
OHFG01009107
[OHFG] human gut metagenome; feces
1149
1075
-
Glu
CTC
[ENA]
¡û
>WENV182070966
OHFL01000663
[OHFL] human gut metagenome; feces
8270
8196
-
Glu
CTC
[ENA]
¡û
>WENV182071849
OHFM01001366
[OHFM] human gut metagenome; feces
2378
2304
-
Glu
CTC
[ENA]
¡û
>WENV182081521
OHGK01001139
[OHGK] human gut metagenome; feces
1540
1466
-
Glu
CTC
[ENA]
¡û
>WENV182087694
OHGW01020945
[OHGW] human gut metagenome; feces
408
482
+
Glu
CTC
[ENA]
¡û
>WENV182089295
OHGZ01005109
[OHGZ] human gut metagenome; feces
1413
1339
-
Glu
CTC
[ENA]
¡û
>WENV182096653
OHHN01017966
[OHHN] human gut metagenome; feces
553
479
-
Glu
CTC
[ENA]
¡û
>WENV182102179
OHHU01025536
[OHHU] human gut metagenome; feces
432
506
+
Glu
CTC
[ENA]
¡û
>WENV182111029
OHIR01001597
[OHIR] human gut metagenome; feces
3300
3226
-
Glu
CTC
[ENA]
¡û
>WENV182114210
OHIY01005523
[OHIY] human gut metagenome; feces
1430
1356
-
Glu
CTC
[ENA]
¡û
>WENV182129528
OHJZ01012609
[OHJZ] human gut metagenome; feces
671
597
-
Glu
CTC
[ENA]
¡û
>WENV182147098
OHLB01000699
[OHLB] human gut metagenome; feces
4878
4804
-
Glu
CTC
[ENA]
¡û
>WENV182157688
OHLX01008448
[OHLX] human gut metagenome; feces
936
862
-
Glu
CTC
[ENA]
¡û
>WENV182167686
OHMS01001561
[OHMS] human gut metagenome; feces
6207
6133
-
Glu
CTC
[ENA]
¡û
>WENV182179667
OHNN01002370
[OHNN] human gut metagenome; feces
1535
1461
-
Glu
CTC
[ENA]
¡û
>WENV182183402
OHNX01002902
[OHNX] human gut metagenome; feces
233
159
-
Glu
CTC
[ENA]
¡û
>WENV182192394
OHOZ01007439
[OHOZ] human gut metagenome; feces
2069
2143
+
Glu
CTC
[ENA]
¡û
>WENV182193050
OHPB01000556
[OHPB] human gut metagenome; feces
22296
22370
+
Glu
CTC
[ENA]
¡û
>WENV182209307
OHPZ01004553
[OHPZ] human gut metagenome; feces
2480
2406
-
Glu
CTC
[ENA]
¡û
>WENV182217198
OHQO01003288
[OHQO] human gut metagenome; feces
3402
3328
-
Glu
CTC
[ENA]
¡û
>WENV182218552
OHQQ01001051
[OHQQ] human gut metagenome; feces
1329
1403
+
Glu
CTC
[ENA]
¡û
>WENV182219304
OHQR01000670
[OHQR] human gut metagenome; feces
13914
13840
-
Glu
CTC
[ENA]
¡û
>WENV182221641
OHQT01003174
[OHQT] human gut metagenome; feces
1659
1733
+
Glu
CTC
[ENA]
¡û
>WENV182222386
OHQX01002748
[OHQX] human gut metagenome; feces
2007
2081
+
Glu
CTC
[ENA]
¡û
>WENV182232139
OHRN01002238
[OHRN] human gut metagenome; feces
2770
2844
+
Glu
CTC
[ENA]
¡û
>WENV182233719
OHRQ01006933
[OHRQ] human gut metagenome; feces
1279
1353
+
Glu
CTC
[ENA]
¡û
>WENV182234922
OHRS01001041
[OHRS] human gut metagenome; feces
3116
3042
-
Glu
CTC
[ENA]
¡û
>WENV182239106
OHSA01003196
[OHSA] human gut metagenome; feces
2031
2105
+
Glu
CTC
[ENA]
¡û
>WENV182244725
OHSJ01003335
[OHSJ] human gut metagenome; feces
3172
3098
-
Glu
CTC
[ENA]
¡û
>WENV182256947
OHTF01000669
[OHTF] human gut metagenome; feces
2622
2548
-
Glu
CTC
[ENA]
¡û
>WENV182261353
OHTK01016704
[OHTK] human gut metagenome; feces
451
525
+
Glu
CTC
[ENA]
¡û
>WENV182271451
OHUF01034901
[OHUF] human gut metagenome; feces
566
492
-
Glu
CTC
[ENA]
¡û
>WENV182293602
OHWC01005674
[OHWC] human gut metagenome; feces
3171
3097
-
Glu
CTC
[ENA]
¡û
>WENV182294802
OHWE01000844
[OHWE] human gut metagenome; feces
8746
8820
+
Glu
CTC
[ENA]
¡û
>WENV182372395
OICV01033628
[OICV] human gut metagenome; feces
262
188
-
Glu
CTC
[ENA]
¡û
>WENV182373985
OIDA01001739
[OIDA] human gut metagenome; feces
2462
2536
+
Glu
CTC
[ENA]
¡û
>WENV182435108
OIJB01007924
[OIJB] human gut metagenome; human gut
770
696
-
Glu
CTC
[ENA]
¡û
>WENV182446590
OILA01006995
[OILA] human gut metagenome; human gut
243
317
+
Glu
CTC
[ENA]
¡û
>WENV182449983
OILT01007196
[OILT] human gut metagenome; human gut
954
880
-
Glu
CTC
[ENA]
¡û
>WENV182452796
OIMF01001023
[OIMF] human gut metagenome; human gut
400
326
-
Glu
CTC
[ENA]
¡û
>WENV182468575
OIOY01015211
[OIOY] human gut metagenome; human gut
213
287
+
Glu
CTC
[ENA]
¡û
>WENV182471796
OIPM01008406
[OIPM] human gut metagenome; human gut
815
741
-
Glu
CTC
[ENA]
¡û
>WENV182647393
OJME01002255
[OJME] human gut metagenome; feces
11294
11368
+
Glu
CTC
[ENA]
¡û
>WENV182653474
OJMI01000199
[OJMI] human gut metagenome; feces
28117
28191
+
Glu
CTC
[ENA]
¡û
>WENV182656474
OJMJ01008859
[OJMJ] human gut metagenome; feces
875
801
-
Glu
CTC
[ENA]
¡û
>WENV182675237
OJNQ01003350
[OJNQ] human gut metagenome; feces
3293
3219
-
Glu
CTC
[ENA]
¡û
>WENV182686146
OJNZ01001907
[OJNZ] human gut metagenome; human gut
3049
2975
-
Glu
CTC
[ENA]
¡û
>WENV182687341
OJOA01000953
[OJOA] human gut metagenome; human gut
4364
4438
+
Glu
CTC
[ENA]
¡û
>WENV182721972
OJPP01013896
[OJPP] human gut metagenome; stool sample
55
129
+
Glu
CTC
[ENA]
¡û
>WENV182737357
OJQI01003024
[OJQI] human gut metagenome; stool sample
3153
3079
-
Glu
CTC
[ENA]
¡û
>WENV182743545
OJQQ01004928
[OJQQ] human gut metagenome; stool sample
984
910
-
Glu
CTC
[ENA]
¡û
>WENV182760891
OJRL01003844
[OJRL] human gut metagenome; stool sample
267
193
-
Glu
CTC
[ENA]
¡û
>WENV182870054
OKRU01000039
[OKRU] human gut metagenome; faeces
57529
57455
-
Glu
CTC
[ENA]
¡û
>WENV182882728
OKSB01001268
[OKSB] human gut metagenome; faeces
5870
5944
+
Glu
CTC
[ENA]
¡û
>WENV182890809
OKSG01005780
[OKSG] human gut metagenome; feces
1556
1482
-
Glu
CTC
[ENA]
¡û
>WENV182897681
OKSP01002728
[OKSP] human gut metagenome; feces
3001
2927
-
Glu
CTC
[ENA]
¡û
>WENV182899896
OKST01002296
[OKST] human gut metagenome; feces
3171
3097
-
Glu
CTC
[ENA]
¡û
>WENV182913436
OKTN01026267
[OKTN] human gut metagenome; feces
564
490
-
Glu
CTC
[ENA]
¡û
>WENV182922946
OKUD01024932
[OKUD] human gut metagenome; feces
75
1
-
Glu
CTC
[ENA]
¡û
>WENV182940508
OKVF01022434
[OKVF] human gut metagenome; human gut
567
641
+
Glu
CTC
[ENA]
¡û
>WENV182956173
OKWE01001825
[OKWE] human gut metagenome; human gut
5025
5099
+
Glu
CTC
[ENA]
¡û
>WENV182968494
OKXB01002418
[OKXB] human gut metagenome; human gut
3321
3247
-
Glu
CTC
[ENA]
¡û
>WENV182989393
OLAI01017310
[OLAI] human gut metagenome; human gut
114
188
+
Glu
CTC
[ENA]
¡û
>WENV183001358
OLCJ01002687
[OLCJ] human gut metagenome; human gut
742
816
+
Glu
CTC
[ENA]
¡û
>WENV183006843
OLDF01026682
[OLDF] human gut metagenome; human gut
63
137
+
Glu
CTC
[ENA]
¡û
>WENV183073891
OLIU01002340
[OLIU] human gut metagenome; stool sample
5932
6006
+
Glu
CTC
[ENA]
¡û
>WENV183078405
OLIX01001546
[OLIX] human gut metagenome; feces
15949
16023
+
Glu
CTC
[ENA]
¡û
>WENV183083042
OLJB01014105
[OLJB] human gut metagenome; human gut
1075
1001
-
Glu
CTC
[ENA]
¡û
>WENV183275798
OLRZ01000432
[OLRZ] human gut metagenome; faeces
22270
22344
+
Glu
CTC
[ENA]
¡û
>WENV183341253
OLWM01002415
[OLWM] human gut metagenome; feces
2633
2707
+
Glu
CTC
[ENA]
¡û
>WENV183351362
OLWY01007555
[OLWY] human gut metagenome; feces
93
19
-
Glu
CTC
[ENA]
¡û
>WENV183354729
OLXC01007102
[OLXC] human gut metagenome; feces
157
83
-
Glu
CTC
[ENA]
¡û
>WENV183361634
OLXK01000293
[OLXK] human gut metagenome; feces
30075
30001
-
Glu
CTC
[ENA]
¡û
>WENV183393168
OLZF01000635
[OLZF] human gut metagenome; feces
5844
5918
+
Glu
CTC
[ENA]
¡û
>WENV183411752
OMAL01001874
[OMAL] human gut metagenome; feces
4648
4722
+
Glu
CTC
[ENA]
¡û
>WENV183430108
OMBP01004199
[OMBP] human gut metagenome; feces
2596
2522
-
Glu
CTC
[ENA]
¡û
>WENV183446242
OMCQ01007736
[OMCQ] human gut metagenome; feces
739
665
-
Glu
CTC
[ENA]
¡û
>WENV183449552
OMCU01001301
[OMCU] human gut metagenome; feces
4279
4205
-
Glu
CTC
[ENA]
¡û
>WENV183474927
OMEV01001250
[OMEV] human gut metagenome; feces
8248
8322
+
Glu
CTC
[ENA]
¡û
>WENV183476014
OMEW01006234
[OMEW] human gut metagenome; feces
2183
2109
-
Glu
CTC
[ENA]
¡û
>WENV183496540
OMGM01003026
[OMGM] human gut metagenome; feces
3165
3091
-
Glu
CTC
[ENA]
¡û
>WENV183498259
OMGO01003397
[OMGO] human gut metagenome; human gut
2232
2158
-
Glu
CTC
[ENA]
¡û
>WENV183500008
OMGQ01000966
[OMGQ] human gut metagenome; human gut
16767
16693
-
Glu
CTC
[ENA]
¡û
>WENV183507704
OMGY01051373
[OMGY] human gut metagenome; human gut
852
926
+
Glu
CTC
[ENA]
¡û
>WENV183531282
OOAC01000485
[OOAC] human gut metagenome; human gut
8144
8070
-
Glu
CTC
[ENA]
¡û
>WENV183532406
OOAD01000442
[OOAD] human gut metagenome; human gut
20678
20752
+
Glu
CTC
[ENA]
¡û
>WENV183564806
OOBZ01000381
[OOBZ] human gut metagenome; human gut
3832
3906
+
Glu
CTC
[ENA]
¡û
>WENV183588837
OOCV01012378
[OOCV] human gut metagenome; human gut
222
148
-
Glu
CTC
[ENA]
¡û
>WENV183638536
OQVI01000094
[OQVI] human gut metagenome; human gut
23746
23820
+
Glu
CTC
[ENA]
¡û
>WENV183760387
PPYE01232839
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
63581
63507
-
Glu
CTC
[ENA]
¡û
>WENV170053386
CDZD01023633
[CDZD] gut metagenome; human stools
341
267
-
Glu
CTC
[ENA]
¡û
>WENV170055881
CDZF01025221
[CDZF] gut metagenome; human stools
20192
20266
+
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK