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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411554 (6 seq.)
>W1910733631
MHIV01000033
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17 [MHIV]
13231
13303
+
Gly
TCC
[ENA]
¡û
>W1910733793
MHJA01000012
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_45_11 [MHJA]
797
725
-
Gly
TCC
[ENA]
¡û
>W1910733903
MHJD01000035
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_46_17 [MHJD]
11830
11902
+
Gly
TCC
[ENA]
¡û
>W2010867061
MHIV01000033
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17 [MHIV]
13231
13303
+
Gly
TCC
[ENA]
¡û
>W2010867223
MHJA01000012
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_45_11 [MHJA]
797
725
-
Gly
TCC
[ENA]
¡û
>W2010867333
MHJD01000035
Unclassified
Candidatus Colwellbacteria bacterium RIFCSPLOWO2_12_FULL_46_17 [MHJD]
11830
11902
+
Gly
TCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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