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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411584 (8 seq.)
>W1910734315
MHJR01000030
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPHIGHO2_12_FULL_44_12 [MHJR]
2454
2528
+
Arg
TCG
[ENA]
¡û
>W1910734436
MHJU01000017
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_02_FULL_44_20 [MHJU]
41993
42067
+
Arg
TCG
[ENA]
¡û
>W1910734501
MHJV01000043
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_12_FULL_44_15b [MHJV]
38320
38394
+
Arg
TCG
[ENA]
¡û
>W2010867745
MHJR01000030
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPHIGHO2_12_FULL_44_12 [MHJR]
2454
2528
+
Arg
TCG
[ENA]
¡û
>W2010867866
MHJU01000017
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_02_FULL_44_20 [MHJU]
41993
42067
+
Arg
TCG
[ENA]
¡û
>W2010867931
MHJV01000043
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_12_FULL_44_15b [MHJV]
38320
38394
+
Arg
TCG
[ENA]
¡û
>W1511611759
LCIC01000026
Unclassified
Parcubacteria group bacterium GW2011_GWC2_44_17 GW2011_GWC2_44_17 [LCIC]
16799
16873
+
Arg
TCG
[ENA]
¡û
>W1511611796
LCID01000044
Unclassified
Parcubacteria group bacterium GW2011_GWF2_44_17 GW2011_GWF2_44_17 [LCID]
2101
2027
-
Arg
TCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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