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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411591 (8 seq.)
>W1910734515
MHKB01000002
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_02_FULL_42_14 [MHKB]
59557
59484
-
Glu
TTC
[ENA]
¡û
>W1910734563
MHKC01000013
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_12_FULL_42_13 [MHKC]
35289
35362
+
Glu
TTC
[ENA]
¡û
>W1910734692
MHKF01000013
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_02_FULL_42_19 [MHKF]
35216
35289
+
Glu
TTC
[ENA]
¡û
>W1910734728
MHKG01000018
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_12_FULL_43_9 [MHKG]
21566
21493
-
Glu
TTC
[ENA]
¡û
>W2010867945
MHKB01000002
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_02_FULL_42_14 [MHKB]
59557
59484
-
Glu
TTC
[ENA]
¡û
>W2010867993
MHKC01000013
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_12_FULL_42_13 [MHKC]
35289
35362
+
Glu
TTC
[ENA]
¡û
>W2010868122
MHKF01000013
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_02_FULL_42_19 [MHKF]
35216
35289
+
Glu
TTC
[ENA]
¡û
>W2010868158
MHKG01000018
Unclassified
Candidatus Kerfeldbacteria bacterium RIFCSPLOWO2_12_FULL_43_9 [MHKG]
21566
21493
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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