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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411654 (4 seq.)
>W1910736494
MHNK01000004
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22 [MHNK]
639
713
+
Val
TAC
[ENA]
¡û
>W1910736658
MHNO01000005
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17b [MHNO]
665
739
+
Val
TAC
[ENA]
¡û
>W2010869924
MHNK01000004
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22 [MHNK]
639
713
+
Val
TAC
[ENA]
¡û
>W2010870088
MHNO01000005
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_45_17b [MHNO]
665
739
+
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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