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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411674 (4 seq.)
>W1910736938
MHNW01000014
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26 [MHNW]
10251
10179
-
Val
CAC
[ENA]
¡û
>W1910743076
MHXF01000051
Unclassified
Parcubacteria group bacterium RIFCSPHIGHO2_02_FULL_48_10b [MHXF]
8357
8429
+
Val
CAC
[ENA]
¡û
>W2010870368
MHNW01000014
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_48_26 [MHNW]
10251
10179
-
Val
CAC
[ENA]
¡û
>W2010876508
MHXF01000051
Unclassified
Parcubacteria group bacterium RIFCSPHIGHO2_02_FULL_48_10b [MHXF]
8357
8429
+
Val
CAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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