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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411680 (6 seq.)
>W1910736584
MHNL01000032
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27 [MHNL]
25621
25549
-
Cys
GCA
[ENA]
¡û
>W1910736760
MHNR01000006
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_48_12 [MHNR]
14936
14864
-
Cys
GCA
[ENA]
¡û
>W1910737148
MHOB01000048
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_12_FULL_47_9c [MHOB]
2718
2792
+
Cys
GCA
[ENA]
¡û
>W2010870014
MHNL01000032
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27 [MHNL]
25621
25549
-
Cys
GCA
[ENA]
¡û
>W2010870190
MHNR01000006
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_02_FULL_48_12 [MHNR]
14936
14864
-
Cys
GCA
[ENA]
¡û
>W2010870578
MHOB01000048
Unclassified
Candidatus Ryanbacteria bacterium RIFCSPLOWO2_12_FULL_47_9c [MHOB]
2718
2792
+
Cys
GCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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