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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.411681 (4 seq.)
>W1910737185
MHOD01000001
Unclassified
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_43_30 [MHOD]
53781
53707
-
Pro
GGG
[ENA]
¡û
>W1910737228
MHOE01000013
Unclassified
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_02_FULL_43_15b [MHOE]
20152
20226
+
Pro
GGG
[ENA]
¡û
>W2010870615
MHOD01000001
Unclassified
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_43_30 [MHOD]
53781
53707
-
Pro
GGG
[ENA]
¡û
>W2010870658
MHOE01000013
Unclassified
Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_02_FULL_43_15b [MHOE]
20152
20226
+
Pro
GGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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