tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.412373 (74 seq.)
>W1710806405 LKAX01000007 Gammaproteobacteria Pseudomonas sp. ADP [LKAX] 4667591 4667664 + Cys GCA [ENA] ¡û
>W1710813412 LKJO01000099 Gammaproteobacteria Pseudomonas citronellolis [LKJO] 16087 16160 + Cys GCA [ENA] ¡û
>W1710815763 LKKN01000082 Gammaproteobacteria Pseudomonas citronellolis [LKKN] 30166 30093 - Cys GCA [ENA] ¡û
>W131061444 ANIR01000004 Gammaproteobacteria Pseudomonas sp. M1 [ANIR] 760428 760501 + Cys GCA [ENA] ¡û
>W1711101691 LTNB01000107 Gammaproteobacteria Pseudomonas sp. HMSC75E02 [LTNB] 23674 23601 - Cys GCA [ENA] ¡û
>W131180594 ARNF01000088 Gammaproteobacteria Psychrobacter lutiphocae DSM 21542 [ARNF] 74888 74815 - Cys GCA [ENA] ¡û
>W1711210177 LXHZ01000005 Gammaproteobacteria Rappaport israeli B08008 [LXHZ] 2038 1965 - Cys GCA [ENA] ¡û
>W1711282418 LZMZ01000051 Gammaproteobacteria Moraxella atlantae [LZMZ] 12746 12819 + Cys GCA [ENA] ¡û
>W1711282436 LZNA01000025 Gammaproteobacteria Moraxella atlantae [LZNA] 9481 9554 + Cys GCA [ENA] ¡û
>W1711292901 LZYC01000088 Gammaproteobacteria Pseudomonas sp. EGD-AKN5 [LZYC] 19508 19581 + Cys GCA [ENA] ¡û
>W1711799894 MXAO01000032 Gammaproteobacteria Moraxella atlantae [MXAO] 11677 11604 - Cys GCA [ENA] ¡û
>C017903 CP000713 Gammaproteobacteria Psychrobacter sp. PRwf-1 [CP000713] 2253108 2253181 + Cys GCA [Ensembl] ¡û
>W08011205 ABSJ01000037 Gammaproteobacteria gamma proteobacterium HTCC5015 [ABSJ] 108916 108846 - Cys GCA [ENA] ¡û
>WENV170122019 CENN01038186 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 131 204 + Cys GCA [ENA] ¢þ
>WENV170145816 CENZ01012867 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 241 168 - Cys GCA [ENA] ¢þ
>WENV170168506 CEOP01096133 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 927 1000 + Cys GCA [ENA] ¢þ
>WENV170190751 CEPC01144506 [CEPC] marine metagenome genome assembly TARA_064_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 353 426 + Cys GCA [ENA] ¢þ
>WENV170241400 CEQN01238641 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 434 361 - Cys GCA [ENA] ¢þ
>WENV170261675 CERB01098904 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 74 1 - Cys GCA [ENA] ¢þ
>WENV170288580 CERX01105996 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1143 1070 - Cys GCA [ENA] ¢þ
>WENV170346854 CETG01076112 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 271 344 + Cys GCA [ENA] ¢þ
>WENV170350531 CETH01087910 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 319 392 + Cys GCA [ENA] ¢þ
>WENV170361997 CETM01040717 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 965 892 - Cys GCA [ENA] ¢þ
>WENV170413395 CEUK01104481 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 223 150 - Cys GCA [ENA] ¢þ
>WENV170415057 CEUL01014268 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1056 1129 + Cys GCA [ENA] ¢þ
>WENV170417782 CEUM01002529 [CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 948 1021 + Cys GCA [ENA] ¢þ
>WENV170421470 CEUN01076922 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 136 209 + Cys GCA [ENA] ¢þ
>WENV170430474 CEUR01322123 [CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1633 1706 + Cys GCA [ENA] ¢þ
>WENV170439355 CEUV01027509 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1049 976 - Cys GCA [ENA] ¢þ
>WENV170462872 CEVD01092646 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 145 218 + Cys GCA [ENA] ¢þ
>WENV170466178 CEVE01027384 [CEVE] marine metagenome genome assembly TARA_124_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 798 871 + Cys GCA [ENA] ¢þ
>WENV170468879 CEVF01068369 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2365 2292 - Cys GCA [ENA] ¢þ
>WENV170485470 CEVN01108282 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 285 212 - Cys GCA [ENA] ¢þ
>WENV170499255 CEVT01133427 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 249 + Cys GCA [ENA] ¢þ
>WENV170509708 CEVY01057668 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 111 184 + Cys GCA [ENA] ¢þ
>WENV170821379 MDSY01021300 [MDSY] marine metagenome; seawater 655 582 - Cys GCA [ENA] ¢þ
>WENV170835426 MDSZ01113810 [MDSZ] marine metagenome; seawater 1091 1018 - Cys GCA [ENA] ¢þ
>WENV170854996 MDTA01198653 [MDTA] marine metagenome; seawater 2578 2651 + Cys GCA [ENA] ¢þ
>WENV170867985 MDTB01154817 [MDTB] marine metagenome; seawater 4751 4824 + Cys GCA [ENA] ¢þ
>C181185215 CP029789 Gammaproteobacteria Psychrobacter sp. YP14 [CP029789] 2076146 2076219 + Cys GCA - ¡û
>C191189096 CP041242 Gammaproteobacteria Lysobacter alkalisoli SJ-36 [CP041242] 2045627 2045554 - Cys GCA - ¡û
>W141701337 JMKP01000010 Gammaproteobacteria Psychrobacter phenylpyruvicus DSM 7000 [JMKP] 3595 3522 - Cys GCA [ENA] ¡û
>W09105584 AAPX01000017 Gammaproteobacteria Psychrobacter sp. PRwf-1 [AAPX] 27239 27166 - Cys GCA [ENA] ¡û
>W141727386 JNCW01000030 Gammaproteobacteria Pseudomonas sp. AAC [JNCW] 13329 13402 + Cys GCA [ENA] ¡û
>W1910372480 FUGD01000069 Gammaproteobacteria Psychrobacter pasteurii CIP 110853 [FUGD] 10154 10081 - Cys GCA [ENA] ¡û
>W1910372534 FUGE01000188 Gammaproteobacteria Psychrobacter piechaudii CIP 110854 [FUGE] 1352 1279 - Cys GCA [ENA] ¡û
>W1910549216 FZPC01000009 Gammaproteobacteria Pseudomonas delhiensis RLD-1 [FZPC] 109617 109544 - Cys GCA [ENA] ¡û
>W1910995983 NLBG01000087 Gammaproteobacteria Pseudomonas aeruginosa Env_1 [NLBG] 138299 138226 - Cys GCA [ENA] ¡û
>W1911397576 NWFK02000001 Gammaproteobacteria Psychrobacter sp. FDAARGOS_221 [NWFK] 2639316 2639243 - Cys GCA [ENA] ¡û
>W1911586019 PISI01000005 Gammaproteobacteria Pseudomonas citronellolis DSM 50332 [PISI] 187498 187571 + Cys GCA [ENA] ¡û
>W1911708858 QPEP01000016 Gammaproteobacteria Salinibius halmophilus WDS2A16A [QPEP] 73943 74016 + Cys GCA [ENA] ¡û
>W1810017281 BGPP01000012 Gammaproteobacteria Pseudomonas citronellolis LA18T [BGPP] 179224 179151 - Cys GCA [ENA] ¡û
>W1810607785 QGSL01000088 Gammaproteobacteria Pseudomonas sp. RW407 [QGSL] 1092207 1092280 + Cys GCA [ENA] ¡û
>WENV003869 AACY020107249 Marine microbial communities from Global Ocean Sampling (GOS) 266 339 + Cys GCA [ENA]
>W1511483891 JWMC01000071 Gammaproteobacteria Pseudomonas sp. PI1 [JWMC] 35738 35665 - Cys GCA [ENA] ¡û
>W11163486 AFHU01000169 Gammaproteobacteria Psychrobacter sp. 1501(2011) [AFHU] 4079 4152 + Cys GCA [ENA] ¡û
>C161067349 CP014158 Gammaproteobacteria Pseudomonas citronellolis P3B5 [CP014158] 3053963 3054036 + Cys GCA [Ensembl] ¡û
>C161092030 CP015878 Gammaproteobacteria Pseudomonas citronellolis SJTE-3 [CP015878] 3053326 3053399 + Cys GCA [Ensembl] ¡û
>WENV059482 AACY023367368 Marine microbial communities from Global Ocean Sampling (GOS) 416 343 - Cys GCA [ENA]
>W1610071736 BCUH01000010 Gammaproteobacteria Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152 [BCUH] 66377 66450 + Cys GCA [ENA] ¡û
>W1610071927 BCUL01000007 Gammaproteobacteria Moraxella atlantae NBRC 14588 [BCUL] 104855 104782 - Cys GCA [ENA] ¡û
>W1610462066 FKLO01000016 Gammaproteobacteria Cardiobacterium hominis CHUV0807 [FKLO] 100720 100793 + Cys GCA [ENA] ¡û
>W1610670132 LKAX01000007 Gammaproteobacteria Pseudomonas sp. ADP [LKAX] 4667591 4667664 + Cys GCA [ENA] ¡û
>W1610677509 LKJO01000099 Gammaproteobacteria Pseudomonas citronellolis [LKJO] 16087 16160 + Cys GCA [ENA] ¡û
>W1610679860 LKKN01000082 Gammaproteobacteria Pseudomonas citronellolis [LKKN] 30166 30093 - Cys GCA [ENA] ¡û
>W1611041629 LZMZ01000051 Gammaproteobacteria Moraxella atlantae [LZMZ] 12746 12819 + Cys GCA [ENA] ¡û
>W1611041647 LZNA01000025 Gammaproteobacteria Moraxella atlantae [LZNA] 9481 9554 + Cys GCA [ENA] ¡û
>W1611050117 LZYC01000088 Gammaproteobacteria Pseudomonas sp. EGD-AKN5 [LZYC] 19508 19581 + Cys GCA [ENA] ¡û
>W1710068938 BCUH01000010 Gammaproteobacteria Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152 [BCUH] 66377 66450 + Cys GCA [ENA] ¡û
>W1710069129 BCUL01000007 Gammaproteobacteria Moraxella atlantae NBRC 14588 [BCUL] 104855 104782 - Cys GCA [ENA] ¡û
>W1710075730 BCZY01000029 Gammaproteobacteria Pseudomonas citronellolis NBRC 103043 [BCZY] 170710 170783 + Cys GCA [ENA] ¡û
>W1710082300 BDGS01000001 Gammaproteobacteria Pseudomonas humi CCA 1 [BDGS] 5952743 5952670 - Cys GCA [ENA] ¡û
>W1710518556 FNEC01000019 Gammaproteobacteria Pseudomonas delhiensis [FNEC] 13003 13076 + Cys GCA [ENA] ¡û
>W1710558290 FOLS01000008 Gammaproteobacteria Pseudomonas citronellolis [FOLS] 170712 170785 + Cys GCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK