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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.413217 (5 seq.)
>WENV181236640
OFEZ01003686
[OFEZ] mouse gut metagenome; faeces
3622
3550
-
Gln
TTG
[ENA]
¡û
>WENV181245197
OFFI01031115
[OFFI] mouse gut metagenome; faeces
1070
998
-
Gln
TTG
[ENA]
¡û
>WENV181245942
OFFJ01004629
[OFFJ] mouse gut metagenome; faeces
5448
5374
-
Gln
TTG
[ENA]
¡û
>WENV181262836
OFFY01040022
[OFFY] mouse gut metagenome; faeces
242
314
+
Gln
TTG
[ENA]
¡û
>WENV181284137
OFGR01000132
[OFGR] mouse gut metagenome; faeces
72755
72683
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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