Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.413431 (18 seq.)
	>C171064542	CP017622	Alphaproteobacteria	Ketogulonicigenium vulgare SPU B805 [CP017622]	2646854	2646928	+	Glu	TTC	-	○
	>C171064543	CP017622	Alphaproteobacteria	Ketogulonicigenium vulgare SPU B805 [CP017622]	2646964	2647038	+	Glu	TTC	-	○
	>C171101151	CP019937	Alphaproteobacteria	Ketogulonicigenium robustum SPU_B003 [CP019937]	2105361	2105435	+	Glu	TTC	-	○
	>C171101152	CP019937	Alphaproteobacteria	Ketogulonicigenium robustum SPU_B003 [CP019937]	2105473	2105547	+	Glu	TTC	-	○
	>WENV183730278	PJTR01013208	[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment		211	138	-	Glu	TTC	[ENA]	◯
	>WENV183731802	PJTT01000192	[PJTT] soil metagenome; Soil (2) enriched on wood chips		36468	36395	-	Glu	TTC	[ENA]	◯
	>C11111809	CP002018	Alphaproteobacteria	Ketogulonicigenium vulgare WSH-001 [CP002018]	2103370	2103444	+	Glu	TTC	[Ensembl]	○
	>C11111810	CP002018	Alphaproteobacteria	Ketogulonicigenium vulgare WSH-001 [CP002018]	2103480	2103554	+	Glu	TTC	[Ensembl]	○
	>C11111874	CP002224	Alphaproteobacteria	Ketogulonicigenium vulgare Y25 [CP002224]	2389395	2389469	+	Glu	TTC	[Ensembl]	○
	>C11111875	CP002224	Alphaproteobacteria	Ketogulonicigenium vulgare Y25 [CP002224]	2389505	2389579	+	Glu	TTC	[Ensembl]	○
	>C161047267	CP012908	Alphaproteobacteria	Ketogulonicigenium vulgare Hbe602 [CP012908]	2493872	2493946	+	Glu	TTC	-	○
	>C161047268	CP012908	Alphaproteobacteria	Ketogulonicigenium vulgare Hbe602 [CP012908]	2493982	2494056	+	Glu	TTC	-	○
	>C161099994	CP016592	Alphaproteobacteria	Ketogulonicigenium vulgare SKV [CP016592]	2492784	2492858	+	Glu	TTC	-	○
	>C161099995	CP016592	Alphaproteobacteria	Ketogulonicigenium vulgare SKV [CP016592]	2492894	2492968	+	Glu	TTC	-	○
	>W1610614681	LGIC01000083	Alphaproteobacteria	Cypionkella psychrotolerans [LGIC]	98501	98575	+	Glu	TTC	[ENA]	○
	>W1610614682	LGIC01000083	Alphaproteobacteria	Cypionkella psychrotolerans [LGIC]	99529	99603	+	Glu	TTC	[ENA]	○
	>W1710735815	LGIC01000083	Alphaproteobacteria	Cypionkella psychrotolerans [LGIC]	98501	98575	+	Glu	TTC	[ENA]	○
	>W1710735816	LGIC01000083	Alphaproteobacteria	Cypionkella psychrotolerans [LGIC]	99529	99603	+	Glu	TTC	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK