tRNA genes clustered and arranged according to each identical group

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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.413626 (78 seq.)
>W1710797305 LJSY01000013 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO18 [LJSY] 68850 68777 - Gly TCC [ENA] ¡û
>W131180839 ARNL01000035 Alphaproteobacteria Yoonia vestfoldensis DSM 16212 [ARNL] 64084 64011 - Gly TCC [ENA] ¡û
>W1711421726 MHZR01000105 Alphaproteobacteria Rhodobacteraceae bacterium GWE1_64_9 [MHZR] 3550 3623 + Gly TCC [ENA] ¡û
>W1711421777 MHZS01000200 Alphaproteobacteria Rhodobacteraceae bacterium GWF1_65_7 [MHZS] 10416 10489 + Gly TCC [ENA] ¡û
>W1711744293 MUHR01000005 Alphaproteobacteria Planktotalea arctica IMCC9565 [MUHR] 539901 539974 + Gly TCC [ENA] ¡û
>C171108667 CP020474 Alphaproteobacteria Roseovarius mucosus SMR3 [CP020474] 3555287 3555360 + Gly TCC - ¡û
>C171118931 CP021431 Alphaproteobacteria Yoonia vestfoldensis SMR4r [CP021431] 519324 519397 + Gly TCC - ¡û
>w027994 ABCR01000002 Alphaproteobacteria Roseobacter sp. AzwK-3b [ABCR] 267289 267364 + Gly TCC [ENA] ¡û
>w027728 ABCL01000002 Alphaproteobacteria Roseovarius sp. TM1035 [ABCL] 331843 331916 + Gly TCC [ENA] ¡û
>w018841 AATQ01000055 Alphaproteobacteria Salipiger bermudensis HTCC2601 [AATQ] 25156 25231 + Gly TCC [ENA] ¡û
>w012886 AAMV01000019 Alphaproteobacteria Roseovarius sp. 217 [AAMV] 27527 27457 - Gly TCC [ENA] ¡û
>w012724 AAMS01000001 Alphaproteobacteria Yoonia vestfoldensis SKA53 [AAMS] 89501 89431 - Gly TCC [ENA] ¡û
>WENV180014129 FPIC01061675 [FPIC] soil metagenome; Soil 180 253 + Gly TCC [ENA] ¢þ
>W141020489 AJKJ01000136 Alphaproteobacteria Citreicella sp. 357 [AJKJ] 16176 16249 + Gly TCC [ENA] ¡û
>WENV180358371 OBNP01042672 [OBNP] marine metagenome; seawater 36 109 + Gly TCC [ENA] ¢þ
>WENV180364113 OBNZ01095448 [OBNZ] marine metagenome; ENVO:00002010 48 121 + Gly TCC [ENA] ¢þ
>W141082496 AUNB01000013 Alphaproteobacteria Thioclava indica DT23-4 [AUNB] 29196 29123 - Gly TCC [ENA] ¡û
>WENV181222762 OFDC01000230 [OFDC] hot springs metagenome; Water 33100 33173 + Gly TCC [ENA] ¢þ
>WENV181227018 OFDN01000994 [OFDN] hot springs metagenome; Water 13239 13166 - Gly TCC [ENA] ¢þ
>WENV181234020 OFET01000888 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 11618 11691 + Gly TCC [ENA] ¢þ
>WENV181234103 OFET01003273 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 1149 1076 - Gly TCC [ENA] ¢þ
>WENV181234418 OFEU01000113 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 11619 11692 + Gly TCC [ENA] ¢þ
>W141142897 AWRV01000123 Alphaproteobacteria Rhodobacteraceae bacterium PD-2 [AWRV] 7789 7862 + Gly TCC [ENA] ¡û
>WENV182546455 OJBO01041648 [OJBO] seawater metagenome; Sea water 225 152 - Gly TCC [ENA] ¢þ
>WENV182578949 OJGP01029083 [OJGP] seawater metagenome; Sea water 448 521 + Gly CCC [ENA] ¢þ
>WENV182591900 OJIO01013406 [OJIO] seawater metagenome; Sea water 909 836 - Gly TCC [ENA] ¢þ
>W141278712 JAFT01000005 Alphaproteobacteria Oceanicola sp. HL-35 [JAFT] 2345376 2345449 + Gly TCC [ENA] ¡û
>WENV183707667 PDWI01009833 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1238 1165 - Gly TCC [ENA] ¢þ
>WENV183708833 PDWI01020299 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 5186 5259 + Gly TCC [ENA] ¢þ
>WENV183711184 PDWI01062739 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 655 582 - Gly TCC [ENA] ¢þ
>WENV183731044 PJTS01005188 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 188 261 + Gly TCC [ENA] ¢þ
>WENV170024131 BCQL01022705 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 298 371 + Gly TCC [ENA] ¢þ
>WENV170260519 CEQZ01055965 [CEQZ] marine metagenome genome assembly TARA_070_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1021 948 - Gly TCC [ENA] ¢þ
>WENV170269034 CERH01028023 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4578 4505 - Gly TCC [ENA] ¢þ
>WENV170621159 FUWD013050632 [FUWD] metagenome; unknown 2109 2036 - Gly TCC [ENA] ¢þ
>WENV170629326 FUWD013267257 [FUWD] metagenome; unknown 2109 2036 - Gly TCC [ENA] ¢þ
>WENV170634337 FYBJ01000232 [FYBJ] marine metagenome; marine 17772 17699 - Gly TCC [ENA] ¢þ
>WENV170680671 LFEF01008706 [LFEF] freshwater metagenome; waterbloom 576 503 - Gly TCC [ENA] ¢þ
>WENV170937774 MDTG01297786 [MDTG] marine metagenome; seawater 32931 33004 + Gly TCC [ENA] ¢þ
>C181081668 CP023454 Alphaproteobacteria Rhodobacteraceae bacterium QY30 [CP023454] 2526823 2526750 - Gly TCC - ¡û
>C181169783 CP028918 Alphaproteobacteria Gemmobacter aquarius HYN0069 [CP028918] 2649703 2649630 - Gly TCC - ¡û
>C181187972 CP030099 Alphaproteobacteria Roseovarius sp. AK1035 [CP030099] 2380397 2380470 + Gly TCC - ¡û
>C181194155 CP030918 Alphaproteobacteria Paracoccus suum SC2-6 [CP030918] 207563 207636 + Gly TCC - ¡û
>W141818739 JQLS01000008 Alphaproteobacteria Roseovarius sp. MCTG156(2b) [JQLS] 2148686 2148613 - Gly TCC [ENA] ¡û
>W1910442781 FWFN01000001 Alphaproteobacteria Pseudooceanicola marinus CECT 7751 [FWFN] 219845 219918 + Gly TCC [ENA] ¡û
>W1910443096 FWFU01000001 Alphaproteobacteria Roseovarius halotolerans CECT 8110 [FWFU] 32074 32147 + Gly TCC [ENA] ¡û
>W1910443171 FWFV01000010 Alphaproteobacteria Palleronia marisminoris CECT 7066 [FWFV] 97748 97821 + Gly TCC [ENA] ¡û
>W1911718081 QQVY01000001 Alphaproteobacteria Paracoccus sp. JM45 [QQVY] 697183 697256 + Gly TCC [ENA] ¡û
>W1810101774 PGTD01000022 Alphaproteobacteria Pseudooceanicola antarcticus Ar-45 [PGTD] 137025 137098 + Gly TCC [ENA] ¡û
>W1810195555 PKRQ01000003 Alphaproteobacteria Tabrizicola sp. TH137 [PKRQ] 478281 478208 - Gly TCC [ENA] ¡û
>W1810365077 PVTT01000001 Alphaproteobacteria Hasllibacter halocynthiae DSM 29318 [PVTT] 1191456 1191383 - Gly TCC [ENA] ¡û
>W1810426273 PYWA01000009 Alphaproteobacteria Paracoccus indicus IO390502 [PYWA] 54212 54285 + Gly TCC [ENA] ¡û
>W1810471803 QAGK01000011 Alphaproteobacteria Oceaniglobus ichthyenteri YLY08 [QAGK] 102468 102395 - Gly TCC [ENA] ¡û
>W1810596899 QGGW01000014 Alphaproteobacteria Roseicyclus mahoneyensis DSM 16097 [QGGW] 120 193 + Gly TCC [ENA] ¡û
>W1810658641 QJJL01000003 Alphaproteobacteria Loktanella sp. PT4BL [QJJL] 724490 724563 + Gly TCC [ENA] ¡û
>W1810667409 QJPK01000001 Alphaproteobacteria Paracoccus sediminilitoris DSL-16 [QJPK] 704324 704397 + Gly TCC [ENA] ¡û
>W1810694727 QLMG01000001 Alphaproteobacteria Salipiger aestuarii DSM 22011 [QLMG] 212489 212416 - Gly TCC [ENA] ¡û
>W1810707360 QNHG01000001 Alphaproteobacteria Pseudogemmobacter bohemicus Cd-10 [QNHG] 75877 75950 + Gly TCC [ENA] ¡û
>C151073513 CP010855 Alphaproteobacteria Marinovum algicola DG 898 [CP010855] 2697451 2697378 - Gly TCC [Ensembl] ¡û
>SRA1051699 SRR035098.61196 454 Sequencing (SRP001819) 334 407 + Gly TCC [SRA]
>SRA1053099 SRR035098.337125 454 Sequencing (SRP001819) 79 152 + Gly TCC [SRA]
>W1511564684 LADY01000020 Alphaproteobacteria Roseovarius sp. BRH_c41 [LADY] 60376 60303 - Gly TCC [ENA] ¡û
>W1511564710 LADY01000064 Alphaproteobacteria Roseovarius sp. BRH_c41 [LADY] 267714 267787 + Gly TCC [ENA] ¡û
>W1610014789 AONH01000016 Alphaproteobacteria Roseovarius mucosus DSM 17069 [AONH] 92001 92074 + Gly TCC [ENA] ¡û
>W1610092905 CYSE01000001 Alphaproteobacteria Tropicibacter naphthalenivorans [CYSE] 296721 296648 - Gly TCC [ENA] ¡û
>WENV071353 AACY023844009 Marine microbial communities from Global Ocean Sampling (GOS) 362 437 + Gly TCC [ENA]
>W1610628542 LIGP01000007 Alphaproteobacteria Loktanella sp. 1ANDIMAR09 [LIGP] 49382 49455 + Gly TCC [ENA] ¡û
>W1610661262 LJSY01000013 Alphaproteobacteria Rhodobacteraceae bacterium HLUCCO18 [LJSY] 68850 68777 - Gly TCC [ENA] ¡û
>W1710011680 AONH01000016 Alphaproteobacteria Roseovarius mucosus DSM 17069 [AONH] 92001 92074 + Gly TCC [ENA] ¡û
>W1710096160 CYSE01000001 Alphaproteobacteria Tropicibacter naphthalenivorans [CYSE] 296721 296648 - Gly TCC [ENA] ¡û
>W1710513019 FMZV01000015 Alphaproteobacteria Ruegeria marina [FMZV] 137392 137319 - Gly TCC [ENA] ¡û
>W1710535254 FNSK01000001 Alphaproteobacteria Rhodobacter sp. 24-YEA-8 [FNSK] 2312539 2312466 - Gly TCC [ENA] ¡û
>W1710546398 FOCE01000007 Alphaproteobacteria Gemmobacter aquatilis [FOCE] 110324 110397 + Gly TCC [ENA] ¡û
>W1710562826 FOPF01000011 Alphaproteobacteria Palleronia marisminoris [FOPF] 97902 97975 + Gly TCC [ENA] ¡û
>W1710568467 FOTQ01000002 Alphaproteobacteria Shimia aestuarii [FOTQ] 354186 354113 - Gly TCC [ENA] ¡û
>W1710591920 FRCB01000014 Alphaproteobacteria Roseovarius litoreus [FRCB] 7813 7740 - Gly TCC [ENA] ¡û
>W1710600106 FTPR01000001 Alphaproteobacteria Yoonia rosea [FTPR] 1438932 1438859 - Gly TCC [ENA] ¡û
>W1710626807 JPKW01000001 Alphaproteobacteria Paracoccus sp. SM22M-07 [JPKW] 497065 497138 + Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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