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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.413952 (257 seq.)
>W1710926755
LOEL01000026
Bacteroidota
Porphyromonas gingivalis [LOEL]
5276
5349
+
Gln
CTG
[ENA]
¡û
>W1711066962
LSDJ01000123
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
16396
16467
+
Gln
CTG
[ENA]
¡û
>W131111452
APMB01000240
Bacteroidota
Porphyromonas gingivalis JCVI SC001 [APMB]
4509
4582
+
Gln
CTG
[ENA]
¡û
>W1711067003
LSDK01000123
Bacteroidota
Porphyromonas somerae [LSDK]
16396
16467
+
Gln
CTG
[ENA]
¡û
>W131175786
ARJN01000033
Bacteroidota
Porphyromonas gulae DSM 15663 [ARJN]
13057
12984
-
Gln
CTG
[ENA]
¡û
>W1712084862
NHRU01000002
Bacteroidota
Porphyromonas gingivalis [NHRU]
32774
32701
-
Gln
CTG
[ENA]
¡û
>C016388
AE015924
Bacteroidota
Porphyromonas gingivalis W83 [AE015924]
1315476
1315403
-
Gln
CTG
[Ensembl]
¡û
>WENV180004019
FLRQ01008467
[FLRQ] metagenome; saliva
386
315
-
Gln
CTG
[ENA]
¢þ
>WENV180005633
FLRW01160845
[FLRW] metagenome; saliva
40
111
+
Gln
CTG
[ENA]
¢þ
>WENV180006758
FLRY01283065
[FLRY] metagenome; saliva
1
72
+
Gln
CTG
[ENA]
¢þ
>WENV180008797
FLSB01153772
[FLSB] metagenome; saliva
1
72
+
Gln
CTG
[ENA]
¢þ
>WENV180009701
FLSC01049934
[FLSC] metagenome; saliva
49
120
+
Gln
CTG
[ENA]
¢þ
>WENV180010801
FLSD01172394
[FLSD] metagenome; saliva
3
74
+
Gln
CTG
[ENA]
¢þ
>WENV180010993
FLSI01064942
[FLSI] metagenome; saliva
74
3
-
Gln
CTG
[ENA]
¢þ
>WENV180012204
FLSK01257660
[FLSK] metagenome; saliva
84
155
+
Gln
CTG
[ENA]
¢þ
>W141042614
AMEQ01000005
Bacteroidota
Porphyromonas catoniae F0037 [AMEQ]
28127
28054
-
Gln
CTG
[ENA]
¡û
>WENV180698106
ODDE01036112
[ODDE] human metagenome; G_DNA_Supragingival plaque
76
5
-
Gln
CTG
[ENA]
¢þ
>WENV180705495
ODEJ01006314
[ODEJ] human metagenome; G_DNA_Tongue dorsum
1467
1538
+
Gln
CTG
[ENA]
¢þ
>WENV180711759
ODFQ01023526
[ODFQ] human metagenome; G_DNA_Anterior nares
116
187
+
Gln
CTG
[ENA]
¢þ
>WENV180720202
ODGJ01023149
[ODGJ] human metagenome; G_DNA_Tongue dorsum
769
698
-
Gln
CTG
[ENA]
¢þ
>WENV180725375
ODGR01067136
[ODGR] human metagenome; G_DNA_Tongue dorsum
230
159
-
Gln
CTG
[ENA]
¢þ
>WENV180726721
ODGU01000333
[ODGU] human metagenome; G_DNA_Supragingival plaque
30508
30437
-
Gln
CTG
[ENA]
¢þ
>WENV180727048
ODGU01001757
[ODGU] human metagenome; G_DNA_Supragingival plaque
5429
5500
+
Gln
CTG
[ENA]
¢þ
>WENV180727182
ODGU01002881
[ODGU] human metagenome; G_DNA_Supragingival plaque
9621
9550
-
Gln
CTG
[ENA]
¢þ
>WENV180733625
ODGZ01000368
[ODGZ] human metagenome; G_DNA_Supragingival plaque
20623
20694
+
Gln
CTG
[ENA]
¢þ
>WENV180738793
ODHD01000527
[ODHD] human metagenome; G_DNA_Supragingival plaque
423
494
+
Gln
CTG
[ENA]
¢þ
>WENV180750274
ODHS01001144
[ODHS] human metagenome; G_DNA_Supragingival plaque
5333
5404
+
Gln
CTG
[ENA]
¢þ
>WENV180754779
ODHU01000825
[ODHU] human metagenome; G_DNA_Supragingival plaque
308
379
+
Gln
CTG
[ENA]
¢þ
>WENV180759169
ODHY01001356
[ODHY] human metagenome; G_DNA_Buccal mucosa
5818
5747
-
Gln
CTG
[ENA]
¢þ
>W141074439
ASYL01000090
Bacteroidota
Porphyromonas gingivalis SJD2 [ASYL]
8069
7996
-
Gln
CTG
[ENA]
¡û
>WENV180765141
ODIB01026194
[ODIB] human metagenome; G_DNA_Supragingival plaque
263
192
-
Gln
CTG
[ENA]
¢þ
>WENV180773788
ODIJ01002310
[ODIJ] human metagenome; G_DNA_Tongue dorsum
572
643
+
Gln
CTG
[ENA]
¢þ
>WENV180774336
ODIJ01017943
[ODIJ] human metagenome; G_DNA_Tongue dorsum
714
643
-
Gln
CTG
[ENA]
¢þ
>WENV180775717
ODIK01003128
[ODIK] human metagenome; G_DNA_Tongue dorsum
5281
5210
-
Gln
CTG
[ENA]
¢þ
>WENV180779887
ODIN01022657
[ODIN] human metagenome; G_DNA_Throat
764
693
-
Gln
CTG
[ENA]
¢þ
>WENV180781899
ODIP01007306
[ODIP] human metagenome; G_DNA_Supragingival plaque
291
362
+
Gln
CTG
[ENA]
¢þ
>WENV180782408
ODIQ01000005
[ODIQ] human metagenome; G_DNA_Tongue dorsum
53313
53384
+
Gln
CTG
[ENA]
¢þ
>WENV180786916
ODIS01000454
[ODIS] human metagenome; G_DNA_Supragingival plaque
18435
18364
-
Gln
CTG
[ENA]
¢þ
>WENV180789772
ODIT01000641
[ODIT] human metagenome; G_DNA_Tongue dorsum
2941
2870
-
Gln
CTG
[ENA]
¢þ
>WENV180793344
ODIW01016041
[ODIW] human metagenome; G_DNA_Tongue dorsum
1038
1109
+
Gln
CTG
[ENA]
¢þ
>WENV180795713
ODJB01000157
[ODJB] human metagenome; G_DNA_Supragingival plaque
41204
41275
+
Gln
CTG
[ENA]
¢þ
>WENV180801076
ODJD01007157
[ODJD] human metagenome; G_DNA_Supragingival plaque
9
80
+
Gln
CTG
[ENA]
¢þ
>WENV180803434
ODJE01146151
[ODJE] human metagenome; G_DNA_Tongue dorsum
95
24
-
Gln
CTG
[ENA]
¢þ
>WENV180803651
ODJG01000012
[ODJG] human metagenome; G_DNA_Supragingival plaque
165520
165591
+
Gln
CTG
[ENA]
¢þ
>WENV180805715
ODJH01000152
[ODJH] human metagenome; G_DNA_Tongue dorsum
16783
16854
+
Gln
CTG
[ENA]
¢þ
>WENV180813284
ODJO01000277
[ODJO] human metagenome; G_DNA_Supragingival plaque
5499
5570
+
Gln
CTG
[ENA]
¢þ
>WENV180816675
ODJP01038634
[ODJP] human metagenome; G_DNA_Tongue dorsum
587
516
-
Gln
CTG
[ENA]
¢þ
>WENV180821384
ODJS01007197
[ODJS] human metagenome; G_DNA_Tongue dorsum
1514
1443
-
Gln
CTG
[ENA]
¢þ
>WENV180824026
ODJX01000344
[ODJX] human metagenome; G_DNA_Supragingival plaque
15935
15864
-
Gln
CTG
[ENA]
¢þ
>WENV180831727
ODKC01000054
[ODKC] human metagenome; G_DNA_Supragingival plaque
98993
99064
+
Gln
CTG
[ENA]
¢þ
>WENV180832146
ODKC01000567
[ODKC] human metagenome; G_DNA_Supragingival plaque
27873
27802
-
Gln
CTG
[ENA]
¢þ
>WENV180833072
ODKC01012809
[ODKC] human metagenome; G_DNA_Supragingival plaque
1167
1238
+
Gln
CTG
[ENA]
¢þ
>WENV180842661
ODKM01115431
[ODKM] human metagenome; G_DNA_Buccal mucosa
183
112
-
Gln
CTG
[ENA]
¢þ
>WENV180843368
ODKN01002285
[ODKN] human metagenome; G_DNA_Supragingival plaque
698
769
+
Gln
CTG
[ENA]
¢þ
>WENV180845902
ODKT01002829
[ODKT] human metagenome; G_DNA_Supragingival plaque
5474
5403
-
Gln
CTG
[ENA]
¢þ
>WENV180846543
ODKT01014253
[ODKT] human metagenome; G_DNA_Supragingival plaque
1270
1341
+
Gln
CTG
[ENA]
¢þ
>WENV180847770
ODKT01164322
[ODKT] human metagenome; G_DNA_Supragingival plaque
72
1
-
Gln
CTG
[ENA]
¢þ
>WENV180854679
ODKX01008090
[ODKX] human metagenome; G_DNA_Tongue dorsum
1024
1095
+
Gln
CTG
[ENA]
¢þ
>WENV180856963
ODLA01000083
[ODLA] human metagenome; G_DNA_Buccal mucosa
19332
19261
-
Gln
CTG
[ENA]
¢þ
>WENV180857961
ODLC01000260
[ODLC] human metagenome; G_DNA_Tongue dorsum
21406
21477
+
Gln
CTG
[ENA]
¢þ
>WENV180859559
ODLD01001397
[ODLD] human metagenome; G_DNA_Supragingival plaque
11477
11406
-
Gln
CTG
[ENA]
¢þ
>WENV180861639
ODLE01007631
[ODLE] human metagenome; G_DNA_Tongue dorsum
3711
3640
-
Gln
CTG
[ENA]
¢þ
>WENV180863824
ODLH01002684
[ODLH] human metagenome; G_DNA_Tongue dorsum
5847
5776
-
Gln
CTG
[ENA]
¢þ
>WENV180880678
ODLZ01044733
[ODLZ] human metagenome; G_DNA_Tongue dorsum
176
105
-
Gln
CTG
[ENA]
¢þ
>WENV180881914
ODMB01000747
[ODMB] human metagenome; G_DNA_Buccal mucosa
5152
5223
+
Gln
CTG
[ENA]
¢þ
>WENV180884080
ODMC01038583
[ODMC] human metagenome; G_DNA_Tongue dorsum
242
171
-
Gln
CTG
[ENA]
¢þ
>WENV180888609
ODMN01001920
[ODMN] human metagenome; G_DNA_Supragingival plaque
1452
1523
+
Gln
CTG
[ENA]
¢þ
>WENV180897671
ODNI01053493
[ODNI] human metagenome; G_DNA_Tongue dorsum
241
170
-
Gln
CTG
[ENA]
¢þ
>WENV180916621
ODTD01000289
[ODTD] human metagenome; G_DNA_Tongue dorsum
21547
21618
+
Gln
CTG
[ENA]
¢þ
>WENV180922579
ODTJ01006386
[ODTJ] human metagenome; G_DNA_Supragingival plaque
2689
2760
+
Gln
CTG
[ENA]
¢þ
>WENV180923949
ODTK01000448
[ODTK] human metagenome; G_DNA_Supragingival plaque
28246
28175
-
Gln
CTG
[ENA]
¢þ
>WENV180924015
ODTK01000747
[ODTK] human metagenome; G_DNA_Supragingival plaque
4110
4181
+
Gln
CTG
[ENA]
¢þ
>WENV180924970
ODTK01028227
[ODTK] human metagenome; G_DNA_Supragingival plaque
318
389
+
Gln
CTG
[ENA]
¢þ
>WENV180927973
ODTM01008736
[ODTM] human metagenome; G_DNA_Supragingival plaque
2592
2521
-
Gln
CTG
[ENA]
¢þ
>WENV180931576
ODTP01006196
[ODTP] human metagenome; G_DNA_Tongue dorsum
3301
3230
-
Gln
CTG
[ENA]
¢þ
>WENV180931710
ODTP01008463
[ODTP] human metagenome; G_DNA_Tongue dorsum
592
663
+
Gln
CTG
[ENA]
¢þ
>WENV180934264
ODTR01074685
[ODTR] human metagenome; G_DNA_Supragingival plaque
161
232
+
Gln
CTG
[ENA]
¢þ
>WENV180937241
ODTV01035762
[ODTV] human metagenome; G_DNA_Buccal mucosa
100
29
-
Gln
CTG
[ENA]
¢þ
>WENV180938207
ODTX01000886
[ODTX] human metagenome; G_DNA_Supragingival plaque
17821
17750
-
Gln
CTG
[ENA]
¢þ
>WENV180938532
ODTX01002811
[ODTX] human metagenome; G_DNA_Supragingival plaque
7951
7880
-
Gln
CTG
[ENA]
¢þ
>WENV180943236
ODUC01000053
[ODUC] human metagenome; G_DNA_Supragingival plaque
58361
58290
-
Gln
CTG
[ENA]
¢þ
>WENV180943285
ODUC01000115
[ODUC] human metagenome; G_DNA_Supragingival plaque
8959
8888
-
Gln
CTG
[ENA]
¢þ
>WENV180946338
ODUD01039166
[ODUD] human metagenome; G_DNA_Tongue dorsum
304
375
+
Gln
CTG
[ENA]
¢þ
>WENV180949280
ODUG01012205
[ODUG] human metagenome; G_DNA_Tongue dorsum
2162
2091
-
Gln
CTG
[ENA]
¢þ
>WENV180951369
ODUH01019127
[ODUH] human metagenome; G_DNA_Subgingival plaque
1308
1237
-
Gln
CTG
[ENA]
¢þ
>WENV180953357
ODUI01023399
[ODUI] human metagenome; G_DNA_Tongue dorsum
94
23
-
Gln
CTG
[ENA]
¢þ
>WENV180954223
ODUJ01000933
[ODUJ] human metagenome; G_DNA_Tongue dorsum
712
783
+
Gln
CTG
[ENA]
¢þ
>WENV180958870
ODUL01088102
[ODUL] human metagenome; G_DNA_Supragingival plaque
230
159
-
Gln
CTG
[ENA]
¢þ
>WENV180973327
ODUW01003459
[ODUW] human metagenome; G_DNA_Supragingival plaque
6723
6652
-
Gln
CTG
[ENA]
¢þ
>WENV180975228
ODUY01003151
[ODUY] human metagenome; G_DNA_Supragingival plaque
2299
2228
-
Gln
CTG
[ENA]
¢þ
>WENV180979392
ODVC01000137
[ODVC] human metagenome; G_DNA_Attached/Keratinized gingiva
23680
23751
+
Gln
CTG
[ENA]
¢þ
>WENV180981695
ODVE01044539
[ODVE] human metagenome; G_DNA_Supragingival plaque
559
488
-
Gln
CTG
[ENA]
¢þ
>WENV180982845
ODVF01001026
[ODVF] human metagenome; G_DNA_Supragingival plaque
5607
5678
+
Gln
CTG
[ENA]
¢þ
>WENV180983142
ODVF01004115
[ODVF] human metagenome; G_DNA_Supragingival plaque
474
545
+
Gln
CTG
[ENA]
¢þ
>WENV180984776
ODVJ01000025
[ODVJ] human metagenome; G_DNA_Tongue dorsum
65418
65347
-
Gln
CTG
[ENA]
¢þ
>WENV180987107
ODVK01004894
[ODVK] human metagenome; G_DNA_Supragingival plaque
2649
2720
+
Gln
CTG
[ENA]
¢þ
>WENV180988450
ODVL01001567
[ODVL] human metagenome; G_DNA_Tongue dorsum
3864
3935
+
Gln
CTG
[ENA]
¢þ
>WENV180990999
ODVN01011533
[ODVN] human metagenome; G_DNA_Tongue dorsum
1252
1181
-
Gln
CTG
[ENA]
¢þ
>WENV180991665
ODVO01000253
[ODVO] human metagenome; G_DNA_Buccal mucosa
14365
14294
-
Gln
CTG
[ENA]
¢þ
>WENV180992279
ODVP01000455
[ODVP] human metagenome; G_DNA_Buccal mucosa
139
68
-
Gln
CTG
[ENA]
¢þ
>WENV180998676
ODVT01001209
[ODVT] human metagenome; G_DNA_Buccal mucosa
3959
4030
+
Gln
CTG
[ENA]
¢þ
>WENV181002222
ODVX01000088
[ODVX] human metagenome; G_DNA_Supragingival plaque
70741
70812
+
Gln
CTG
[ENA]
¢þ
>WENV181002518
ODVX01000549
[ODVX] human metagenome; G_DNA_Supragingival plaque
18855
18926
+
Gln
CTG
[ENA]
¢þ
>WENV181005869
ODWA01000077
[ODWA] human metagenome; G_DNA_Buccal mucosa
42981
42910
-
Gln
CTG
[ENA]
¢þ
>WENV181007684
ODWE01000459
[ODWE] human metagenome; G_DNA_Supragingival plaque
17960
17889
-
Gln
CTG
[ENA]
¢þ
>WENV181009085
ODWE01028542
[ODWE] human metagenome; G_DNA_Supragingival plaque
671
742
+
Gln
CTG
[ENA]
¢þ
>WENV181010553
ODWH01058371
[ODWH] human metagenome; G_DNA_Buccal mucosa
255
184
-
Gln
CTG
[ENA]
¢þ
>WENV181011021
ODWI01003292
[ODWI] human metagenome; G_DNA_Tongue dorsum
417
346
-
Gln
CTG
[ENA]
¢þ
>WENV181016148
ODWR01000265
[ODWR] human metagenome; G_DNA_Tongue dorsum
18575
18504
-
Gln
CTG
[ENA]
¢þ
>WENV181018689
ODWU01000020
[ODWU] human metagenome; G_DNA_Supragingival plaque
89840
89769
-
Gln
CTG
[ENA]
¢þ
>WENV181021786
ODWV01044880
[ODWV] human metagenome; G_DNA_Tongue dorsum
179
108
-
Gln
CTG
[ENA]
¢þ
>WENV181025845
ODXB01053598
[ODXB] human metagenome; G_DNA_Buccal mucosa
285
214
-
Gln
CTG
[ENA]
¢þ
>WENV181027431
ODXD01001914
[ODXD] human metagenome; G_DNA_Buccal mucosa
3116
3045
-
Gln
CTG
[ENA]
¢þ
>WENV181033690
ODXN01018300
[ODXN] human metagenome; G_DNA_Tongue dorsum
148
219
+
Gln
CTG
[ENA]
¢þ
>WENV181043099
ODXU01043393
[ODXU] human metagenome; G_DNA_Buccal mucosa
227
298
+
Gln
CTG
[ENA]
¢þ
>WENV181043979
ODXV01001924
[ODXV] human metagenome; G_DNA_Tongue dorsum
10266
10195
-
Gln
CTG
[ENA]
¢þ
>WENV181051238
ODYD01292403
[ODYD] human metagenome; G_DNA_Supragingival plaque
81
10
-
Gln
CTG
[ENA]
¢þ
>WENV181051937
ODYE01008956
[ODYE] human metagenome; G_DNA_Tongue dorsum
1128
1057
-
Gln
CTG
[ENA]
¢þ
>WENV181052743
ODYG01019716
[ODYG] human metagenome; G_DNA_Tongue dorsum
350
421
+
Gln
CTG
[ENA]
¢þ
>WENV181059177
ODYM01000003
[ODYM] human metagenome; G_DNA_Tongue dorsum
109679
109608
-
Gln
CTG
[ENA]
¢þ
>WENV181063281
ODYP01000333
[ODYP] human metagenome; G_DNA_Supragingival plaque
32091
32020
-
Gln
CTG
[ENA]
¢þ
>WENV181065595
ODYT01037060
[ODYT] human metagenome; G_DNA_Buccal mucosa
235
306
+
Gln
CTG
[ENA]
¢þ
>WENV181066846
ODZI01002376
[ODZI] human metagenome; G_DNA_Supragingival plaque
2651
2580
-
Gln
CTG
[ENA]
¢þ
>WENV181069438
ODZZ01053635
[ODZZ] human metagenome; G_DNA_Tongue dorsum
149
220
+
Gln
CTG
[ENA]
¢þ
>WENV181069963
OEAE01000072
[OEAE] human metagenome; G_DNA_Supragingival plaque
59182
59253
+
Gln
CTG
[ENA]
¢þ
>WENV181073627
OEAO01000655
[OEAO] human metagenome; G_DNA_Tongue dorsum
12563
12492
-
Gln
CTG
[ENA]
¢þ
>WENV181075913
OEAP01000716
[OEAP] human metagenome; G_DNA_Supragingival plaque
20493
20422
-
Gln
CTG
[ENA]
¢þ
>WENV181076213
OEAP01002559
[OEAP] human metagenome; G_DNA_Supragingival plaque
419
490
+
Gln
CTG
[ENA]
¢þ
>WENV181076296
OEAP01003407
[OEAP] human metagenome; G_DNA_Supragingival plaque
676
747
+
Gln
CTG
[ENA]
¢þ
>WENV181078122
OEAQ01005932
[OEAQ] human metagenome; G_DNA_Buccal mucosa
530
459
-
Gln
CTG
[ENA]
¢þ
>WENV181078473
OEAS01000086
[OEAS] human metagenome; G_DNA_Supragingival plaque
51223
51294
+
Gln
CTG
[ENA]
¢þ
>WENV181078642
OEAS01000211
[OEAS] human metagenome; G_DNA_Supragingival plaque
41112
41041
-
Gln
CTG
[ENA]
¢þ
>WENV181078955
OEAS01001204
[OEAS] human metagenome; G_DNA_Supragingival plaque
14764
14693
-
Gln
CTG
[ENA]
¢þ
>WENV181082836
OEAV01000791
[OEAV] human metagenome; G_DNA_Supragingival plaque
17093
17022
-
Gln
CTG
[ENA]
¢þ
>WENV181086033
OEAY01000040
[OEAY] human metagenome; G_DNA_Tongue dorsum
111315
111244
-
Gln
CTG
[ENA]
¢þ
>WENV181091024
OEBC01009156
[OEBC] human metagenome; G_DNA_Supragingival plaque
311
382
+
Gln
CTG
[ENA]
¢þ
>WENV181094321
OEBY01000069
[OEBY] human metagenome; G_DNA_Tongue dorsum
25303
25232
-
Gln
CTG
[ENA]
¢þ
>WENV181097117
OECA01002574
[OECA] human metagenome; G_DNA_Tongue dorsum
7277
7206
-
Gln
CTG
[ENA]
¢þ
>WENV181097377
OECA01007029
[OECA] human metagenome; G_DNA_Tongue dorsum
1863
1792
-
Gln
CTG
[ENA]
¢þ
>WENV181102456
OECT01003377
[OECT] human metagenome; G_DNA_Tongue dorsum
1435
1364
-
Gln
CTG
[ENA]
¢þ
>WENV181103721
OECV01001850
[OECV] human metagenome; G_DNA_Throat
3659
3588
-
Gln
CTG
[ENA]
¢þ
>WENV181105460
OEED01004735
[OEED] human metagenome; G_DNA_Tongue dorsum
875
946
+
Gln
CTG
[ENA]
¢þ
>WENV181106799
OEEI01000214
[OEEI] human metagenome; G_DNA_Supragingival plaque
2726
2797
+
Gln
CTG
[ENA]
¢þ
>WENV181108290
OEEJ01000003
[OEEJ] human metagenome; G_DNA_Tongue dorsum
181959
182030
+
Gln
CTG
[ENA]
¢þ
>WENV181113246
OEEL01016777
[OEEL] human metagenome; G_DNA_Tongue dorsum
544
473
-
Gln
CTG
[ENA]
¢þ
>WENV181119894
OEFJ01000398
[OEFJ] human metagenome; G_DNA_Attached/Keratinized gingiva
6039
5968
-
Gln
CTG
[ENA]
¢þ
>WENV181120992
OEFL01000053
[OEFL] human metagenome; G_DNA_Supragingival plaque
20616
20687
+
Gln
CTG
[ENA]
¢þ
>WENV181121151
OEFL01000765
[OEFL] human metagenome; G_DNA_Supragingival plaque
13161
13090
-
Gln
CTG
[ENA]
¢þ
>WENV181125704
OEFU01014336
[OEFU] human metagenome; G_DNA_Saliva
604
675
+
Gln
CTG
[ENA]
¢þ
>WENV181139930
OEGN01036716
[OEGN] human metagenome; G_DNA_Tongue dorsum
922
993
+
Gln
CTG
[ENA]
¢þ
>WENV181141893
OEGT01030298
[OEGT] human metagenome; G_DNA_Throat
416
345
-
Gln
CTG
[ENA]
¢þ
>WENV181146164
OEHQ01001427
[OEHQ] human metagenome; G_DNA_Supragingival plaque
413
484
+
Gln
CTG
[ENA]
¢þ
>WENV181149844
OEHW01000001
[OEHW] human metagenome; G_DNA_Tongue dorsum
224457
224386
-
Gln
CTG
[ENA]
¢þ
>WENV181152285
OEIA01000703
[OEIA] human metagenome; G_DNA_Supragingival plaque
15304
15233
-
Gln
CTG
[ENA]
¢þ
>WENV181156665
OEIE01050523
[OEIE] human metagenome; G_DNA_Supragingival plaque
401
472
+
Gln
CTG
[ENA]
¢þ
>WENV181157037
OEIG01000175
[OEIG] human metagenome; G_DNA_Hard palate
25096
25167
+
Gln
CTG
[ENA]
¢þ
>WENV181158895
OEIH01015564
[OEIH] human metagenome; G_DNA_Supragingival plaque
1219
1290
+
Gln
CTG
[ENA]
¢þ
>WENV181175922
OEJQ01070715
[OEJQ] human metagenome; G_DNA_Tongue dorsum
118
47
-
Gln
CTG
[ENA]
¢þ
>WENV181178047
OEJS01047716
[OEJS] human metagenome; G_DNA_Supragingival plaque
280
351
+
Gln
CTG
[ENA]
¢þ
>WENV181179657
OEJT01010764
[OEJT] human metagenome; G_DNA_Supragingival plaque
841
912
+
Gln
CTG
[ENA]
¢þ
>WENV181181092
OEJU01005384
[OEJU] human metagenome; G_DNA_Supragingival plaque
2960
2889
-
Gln
CTG
[ENA]
¢þ
>WENV181181691
OEJV01000077
[OEJV] human metagenome; G_DNA_Supragingival plaque
53396
53325
-
Gln
CTG
[ENA]
¢þ
>WENV181182117
OEJV01002653
[OEJV] human metagenome; G_DNA_Supragingival plaque
3773
3702
-
Gln
CTG
[ENA]
¢þ
>W141145630
AWUU01000059
Bacteroidota
Porphyromonas gingivalis F0568 [AWUU]
4037
4110
+
Gln
CTG
[ENA]
¡û
>W141145680
AWUV01000094
Bacteroidota
Porphyromonas gingivalis F0569 [AWUV]
13438
13511
+
Gln
CTG
[ENA]
¡û
>W141145712
AWUW01000048
Bacteroidota
Porphyromonas gingivalis F0570 [AWUW]
3953
4026
+
Gln
CTG
[ENA]
¡û
>W141145780
AWUX01000112
Bacteroidota
Porphyromonas sp. oral taxon 278 oral taxon 278 str. W7784 [AWUX]
7832
7759
-
Gln
CTG
[ENA]
¡û
>W141145987
AWVD01000071
Bacteroidota
Porphyromonas gingivalis F0566 [AWVD]
4103
4030
-
Gln
CTG
[ENA]
¡û
>W141146033
AWVE01000056
Bacteroidota
Porphyromonas gingivalis W4087 [AWVE]
19524
19451
-
Gln
CTG
[ENA]
¡û
>WENV182004964
OHBE01001126
[OHBE] human gut metagenome; faeces
19610
19539
-
Gln
CTG
[ENA]
¢þ
>C08007303
AP009380
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [AP009380]
1530170
1530097
-
Gln
CTG
[Ensembl]
¡û
>WENV183507904
OMGZ01000216
[OMGZ] human oral metagenome; human oral
1881
1952
+
Gln
CTG
[ENA]
¢þ
>WENV183507978
OMHA01000148
[OMHA] human oral metagenome; human oral
1157
1086
-
Gln
CTG
[ENA]
¢þ
>WENV183510898
OMHT01000165
[OMHT] human oral metagenome; human oral
3681
3610
-
Gln
CTG
[ENA]
¢þ
>WENV183704759
PDWI01000597
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
50851
50922
+
Gln
TTG
[ENA]
¢þ
>WENV183705265
PDWI01001291
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
12819
12748
-
Gln
TTG
[ENA]
¢þ
>WENV183706342
PDWI01003830
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
3804
3733
-
Gln
TTG
[ENA]
¢þ
>WENV183707067
PDWI01006580
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
4106
4177
+
Gln
CTG
[ENA]
¢þ
>WENV183707360
PDWI01008036
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
5497
5426
-
Gln
TTG
[ENA]
¢þ
>WENV183707921
PDWI01011503
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
5458
5387
-
Gln
TTG
[ENA]
¢þ
>WENV183708601
PDWI01017887
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
2900
2971
+
Gln
TTG
[ENA]
¢þ
>WENV183709113
PDWI01024026
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
4359
4288
-
Gln
TTG
[ENA]
¢þ
>WENV183711088
PDWI01060778
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
86
15
-
Gln
TTG
[ENA]
¢þ
>WENV183711124
PDWI01061703
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
670
599
-
Gln
TTG
[ENA]
¢þ
>WENV183714744
PDWI01201266
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
1014
1085
+
Gln
CTG
[ENA]
¢þ
>W141382660
JDFF01000019
Bacteroidota
Porphyromonas catoniae ATCC 51270 [JDFF]
31734
31661
-
Gln
CTG
[ENA]
¡û
>C181102065
CP024591
Bacteroidota
Porphyromonas gingivalis KCOM 2802 [CP024591]
39887
39958
+
Gln
CTG
-
¡û
>C181102151
CP024592
Bacteroidota
Porphyromonas gingivalis KCOM 2803 [CP024592]
1401171
1401100
-
Gln
CTG
-
¡û
>C181102180
CP024593
Bacteroidota
Porphyromonas gingivalis KCOM 2804 [CP024593]
2176334
2176405
+
Gln
CTG
-
¡û
>C181102221
CP024594
Bacteroidota
Porphyromonas gingivalis KCOM 2805 [CP024594]
1163124
1163195
+
Gln
CTG
-
¡û
>C181102298
CP024595
Bacteroidota
Porphyromonas gingivalis KCOM 3001 [CP024595]
1247401
1247330
-
Gln
CTG
-
¡û
>C181102322
CP024596
Bacteroidota
Porphyromonas gingivalis KCOM 3131 [CP024596]
1610958
1611029
+
Gln
CTG
-
¡û
>C181102378
CP024597
Bacteroidota
Porphyromonas gingivalis KCOM 2796 [CP024597]
2075053
2074982
-
Gln
CTG
-
¡û
>C181102435
CP024598
Bacteroidota
Porphyromonas gingivalis KCOM 2798 [CP024598]
2216970
2217041
+
Gln
CTG
-
¡û
>C181102485
CP024599
Bacteroidota
Porphyromonas gingivalis KCOM 2800 [CP024599]
1883487
1883558
+
Gln
CTG
-
¡û
>C181102525
CP024600
Bacteroidota
Porphyromonas gingivalis KCOM 2801 [CP024600]
1533718
1533789
+
Gln
CTG
-
¡û
>C181102553
CP024601
Bacteroidota
Porphyromonas gingivalis KCOM 2799 [CP024601]
32498
32569
+
Gln
CTG
-
¡û
>C181123607
CP025930
Bacteroidota
Porphyromonas gingivalis ATCC 33277 [CP025930]
1556067
1555996
-
Gln
CTG
-
¡û
>C181123635
CP025931
Bacteroidota
Porphyromonas gingivalis TDC 60 [CP025931]
911229
911300
+
Gln
CTG
-
¡û
>C181123685
CP025932
Bacteroidota
Porphyromonas gingivalis W83 [CP025932]
1100185
1100256
+
Gln
CTG
-
¡û
>W141740402
JNOS01000002
Bacteroidota
Porphyromonas sp. KLE 1280 [JNOS]
530051
529980
-
Gln
CTG
[ENA]
¡û
>W1910371029
FUFB01000043
Bacteroidota
Porphyromonas gingivalis 3_3 [FUFB]
9821
9750
-
Gln
CTG
[ENA]
¡û
>W1910371084
FUFC01000051
Bacteroidota
Porphyromonas gingivalis 3A1 [FUFC]
26927
26998
+
Gln
CTG
[ENA]
¡û
>W1910371128
FUFD01000069
Bacteroidota
Porphyromonas gingivalis 7BTORR [FUFD]
4401
4472
+
Gln
CTG
[ENA]
¡û
>W1910371150
FUFE01000061
Bacteroidota
Porphyromonas gingivalis 11A [FUFE]
27018
26947
-
Gln
CTG
[ENA]
¡û
>W1910371203
FUFF01000015
Bacteroidota
Porphyromonas gingivalis A7A1_28 [FUFF]
305617
305546
-
Gln
CTG
[ENA]
¡û
>W1910371250
FUFG01000045
Bacteroidota
Porphyromonas gingivalis 84_3 [FUFG]
21874
21945
+
Gln
CTG
[ENA]
¡û
>W1910371290
FUFH01000052
Bacteroidota
Porphyromonas gingivalis ATCC 49417 [FUFH]
4147
4076
-
Gln
CTG
[ENA]
¡û
>W1910371327
FUFI01000027
Bacteroidota
Porphyromonas gingivalis SU60 [FUFI]
158917
158846
-
Gln
CTG
[ENA]
¡û
>W1910371349
FUFJ01000021
Bacteroidota
Porphyromonas gingivalis AFR5B1 [FUFJ]
4020
4091
+
Gln
CTG
[ENA]
¡û
>W1910372563
FUGF01000023
Bacteroidota
Porphyromonas gingivalis 15_9 [FUGF]
9932
9861
-
Gln
CTG
[ENA]
¡û
>W1910372630
FUGG01000059
Bacteroidota
Porphyromonas gingivalis 13_1 [FUGG]
27119
27048
-
Gln
CTG
[ENA]
¡û
>W1911247364
NSLL01000007
Bacteroidota
Porphyromonas gingivalis WW5127 [NSLL]
22068
22139
+
Gln
CTG
[ENA]
¡û
>W1911247432
NSLM01000019
Bacteroidota
Porphyromonas gingivalis WW5019 [NSLM]
23364
23435
+
Gln
CTG
[ENA]
¡û
>W1911247477
NSLN01000053
Bacteroidota
Porphyromonas gingivalis WW3039 [NSLN]
7414
7343
-
Gln
CTG
[ENA]
¡û
>W1911247514
NSLO01000028
Bacteroidota
Porphyromonas gingivalis WW3102 [NSLO]
4516
4587
+
Gln
CTG
[ENA]
¡û
>W1911247558
NSLP01000034
Bacteroidota
Porphyromonas gingivalis WW3040 [NSLP]
20674
20603
-
Gln
CTG
[ENA]
¡û
>W1911247592
NSLQ01000018
Bacteroidota
Porphyromonas gingivalis WW2952 [NSLQ]
21717
21788
+
Gln
CTG
[ENA]
¡û
>W1911247623
NSLR01000007
Bacteroidota
Porphyromonas gingivalis WW2931 [NSLR]
56349
56420
+
Gln
CTG
[ENA]
¡û
>W1911247686
NSLS01000017
Bacteroidota
Porphyromonas gingivalis WW2903 [NSLS]
34263
34192
-
Gln
CTG
[ENA]
¡û
>W1911247729
NSLT01000032
Bacteroidota
Porphyromonas gingivalis WW2885 [NSLT]
19617
19546
-
Gln
CTG
[ENA]
¡û
>W1911247756
NSLU01000022
Bacteroidota
Porphyromonas gingivalis WW2881 [NSLU]
23634
23705
+
Gln
CTG
[ENA]
¡û
>W1911247792
NSLV01000004
Bacteroidota
Porphyromonas gingivalis WW2866 [NSLV]
7414
7343
-
Gln
CTG
[ENA]
¡û
>W1911247833
NSLW01000001
Bacteroidota
Porphyromonas gingivalis WW2842 [NSLW]
206260
206189
-
Gln
CTG
[ENA]
¡û
>W1911247902
NSLX01000029
Bacteroidota
Porphyromonas gingivalis WW2096 [NSLX]
4431
4502
+
Gln
CTG
[ENA]
¡û
>W1911709112
QPGS01000005
Bacteroidota
Porphyromonas gingivalis 381OKJP [QPGS]
52786
52715
-
Gln
CTG
[ENA]
¡û
>W1810573714
QEKY01000003
Bacteroidota
Porphyromonas loveana DSM 28520 [QEKY]
127399
127328
-
Gln
CTG
[ENA]
¡û
>C151089033
CP011995
Bacteroidota
Porphyromonas gingivalis A7436 [CP011995]
855646
855719
+
Gln
CTG
-
¡û
>C151089080
CP011996
Bacteroidota
Porphyromonas gingivalis AJW4 [CP011996]
740996
741069
+
Gln
CTG
-
¡û
>C11117328
AP012203
Bacteroidota
Porphyromonas gingivalis TDC60 [AP012203]
1247678
1247605
-
Gln
CTG
[Ensembl]
¡û
>W1511328354
JQJE01000017
Bacteroidota
Porphyromonas gulae OH3161B [JQJE]
13612
13685
+
Gln
CTG
[ENA]
¡û
>W1511336119
JQZY01000009
Bacteroidota
Porphyromonas sp. COT-052 OH4946 [JQZY]
333946
334019
+
Gln
CTG
[ENA]
¡û
>W1511336356
JRAE01000030
Bacteroidota
Porphyromonas gulae COT-052_OH2199 [JRAE]
18354
18281
-
Gln
TTG
[ENA]
¡û
>W1511336369
JRAE01000070
Bacteroidota
Porphyromonas gulae COT-052_OH2199 [JRAE]
55853
55926
+
Gln
CTG
[ENA]
¡û
>W1511336406
JRAF01000045
Bacteroidota
Porphyromonas gulae COT-052 OH3498 [JRAF]
9537
9610
+
Gln
CTG
[ENA]
¡û
>W1511336435
JRAG01000007
Bacteroidota
Porphyromonas gulae COT-052 OH1355 [JRAG]
9691
9764
+
Gln
CTG
[ENA]
¡û
>W1511336525
JRAI01000010
Bacteroidota
Porphyromonas gulae COT-052 OH1451 [JRAI]
4482
4555
+
Gln
CTG
[ENA]
¡û
>W1511336598
JRAJ01000017
Bacteroidota
Porphyromonas gulae COT-052 OH2179 [JRAJ]
121191
121264
+
Gln
CTG
[ENA]
¡û
>W1511336623
JRAK01000073
Bacteroidota
Porphyromonas gulae COT-052 OH3439 [JRAK]
5915
5988
+
Gln
CTG
[ENA]
¡û
>W1511336667
JRAL01000023
Bacteroidota
Porphyromonas gulae COT-052 OH4119 [JRAL]
11542
11615
+
Gln
CTG
[ENA]
¡û
>W1511336833
JRAQ01000021
Bacteroidota
Porphyromonas gulae COT-052 OH3471 [JRAQ]
42670
42743
+
Gln
CTG
[ENA]
¡û
>W1511336947
JRAT01000014
Bacteroidota
Porphyromonas gulae COT-052 OH3856 [JRAT]
125164
125237
+
Gln
CTG
[ENA]
¡û
>W1511343949
JRFD01000052
Bacteroidota
Porphyromonas gulae COT-052 OH2857 [JRFD]
30813
30740
-
Gln
CTG
[ENA]
¡û
>C161018136
CP007756
Bacteroidota
Porphyromonas gingivalis HG66 [CP007756]
1226364
1226437
+
Gln
CTG
[Ensembl]
¡û
>C161046948
CP012889
Bacteroidota
Porphyromonas gingivalis 381 [CP012889]
1554148
1554075
-
Gln
CTG
-
¡û
>C161051769
CP013131
Bacteroidota
Porphyromonas gingivalis A7A1-28 [CP013131]
768217
768290
+
Gln
CTG
-
¡û
>W121073563
AJZS01000060
Bacteroidota
Porphyromonas gingivalis W50 [AJZS]
10151
10078
-
Gln
CTG
[ENA]
¡û
>W121112264
ALKJ01000019
Bacteroidota
Porphyromonas sp. oral taxon 279 oral taxon 279 str. F0450 [ALKJ]
138811
138882
+
Gln
CTG
[ENA]
¡û
>W1610060528
BCBV01000026
Bacteroidota
Porphyromonas gingivalis [BCBV]
52965
52892
-
Gln
CTG
[ENA]
¡û
>W1610784248
LOEL01000026
Bacteroidota
Porphyromonas gingivalis [LOEL]
5276
5349
+
Gln
CTG
[ENA]
¡û
>W1610907532
LSDJ01000123
Bacteroidota
Porphyromonadaceae bacterium KA00676 [LSDJ]
16396
16467
+
Gln
CTG
[ENA]
¡û
>W1610907573
LSDK01000123
Bacteroidota
Porphyromonas somerae [LSDK]
16396
16467
+
Gln
CTG
[ENA]
¡û
>W1710017884
ASYM01000069
Bacteroidota
Porphyromonas gingivalis SJD4 [ASYM]
19603
19530
-
Gln
CTG
[ENA]
¡û
>W1710017923
ASYN01000114
Bacteroidota
Porphyromonas gingivalis SJD5 [ASYN]
19571
19498
-
Gln
CTG
[ENA]
¡û
>W1710017969
ASYO01000074
Bacteroidota
Porphyromonas gingivalis SJD11 [ASYO]
19466
19393
-
Gln
CTG
[ENA]
¡û
>W1710018033
ASYP01000141
Bacteroidota
Porphyromonas gingivalis SJD12 [ASYP]
7872
7799
-
Gln
CTG
[ENA]
¡û
>W1710057783
BCBV01000026
Bacteroidota
Porphyromonas gingivalis [BCBV]
52965
52892
-
Gln
CTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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