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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.417127 (271 seq.)
>W1710867797
LMIO01000004
Actinomycetota
Leifsonia sp. Root227 [LMIO]
534397
534326
-
Gly
CCC
[ENA]
¡û
>W1710869867
LMKB01000001
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
796004
796075
+
Gly
CCC
[ENA]
¡û
>W1710871382
LMLG01000006
Actinomycetota
Frigoribacterium sp. Leaf44 [LMLG]
82757
82686
-
Gly
CCC
[ENA]
¡û
>W1710872739
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
2941425
2941496
+
Gly
CCC
[ENA]
¡û
>W1710874373
LMNO01000001
Actinomycetota
Rathayibacter sp. Leaf294 [LMNO]
436834
436907
+
Gly
CCC
[ENA]
¡û
>W1710874525
LMNR01000001
Actinomycetota
Rathayibacter sp. Leaf296 [LMNR]
626761
626688
-
Gly
CCC
[ENA]
¡û
>W1710874599
LMNT01000001
Actinomycetota
Rathayibacter sp. Leaf299 [LMNT]
744598
744525
-
Gly
CCC
[ENA]
¡û
>W1710876165
LMOZ01000003
Actinomycetota
Leifsonia sp. Leaf336 [LMOZ]
810534
810461
-
Gly
CCC
[ENA]
¡û
>W1710876838
LMPP01000001
Actinomycetota
Rathayibacter sp. Leaf185 [LMPP]
436697
436770
+
Gly
CCC
[ENA]
¡û
>W1710876903
LMPQ01000010
Actinomycetota
Frigoribacterium sp. Leaf186 [LMPQ]
808749
808820
+
Gly
CCC
[ENA]
¡û
>W1710878120
LMQR01000001
Actinomycetota
Frigoribacterium sp. Leaf415 [LMQR]
2940691
2940762
+
Gly
CCC
[ENA]
¡û
>W1710921175
LNZG01000023
Actinomycetota
Leifsonia xyli subsp. xyli [LNZG]
69378
69305
-
Gly
CCC
[ENA]
¡û
>W1711018547
LQXA01000019
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
155423
155350
-
Gly
CCC
[ENA]
¡û
>W131224978
AUDF01000002
Actinomycetota
Rathayibacter toxicus DSM 7488 [AUDF]
416222
416295
+
Gly
CCC
[ENA]
¡û
>W1711357161
MDHB01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHB]
1039527
1039600
+
Gly
CCC
[ENA]
¡û
>W1711357224
MDHC01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHC]
3208582
3208655
+
Gly
CCC
[ENA]
¡û
>W1711357280
MDHD01000372
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHD]
7935
8008
+
Gly
CCC
[ENA]
¡û
>W1711357303
MDHE01000153
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHE]
31964
31891
-
Gly
CCC
[ENA]
¡û
>W1711357370
MDHF01000267
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHF]
28830
28757
-
Gly
CCC
[ENA]
¡û
>W1711357389
MDHG01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHG]
1573220
1573293
+
Gly
CCC
[ENA]
¡û
>W1711357426
MDHH01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHH]
885069
885142
+
Gly
CCC
[ENA]
¡û
>W1711357504
MDHI01000014
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHI]
3823
3750
-
Gly
CCC
[ENA]
¡û
>W1711357506
MDHI01000024
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHI]
447151
447224
+
Gly
CCC
[ENA]
¡û
>W1711357539
MDHJ01000001
Actinomycetota
Clavibacter michiganensis [MDHJ]
3186334
3186407
+
Gly
CCC
[ENA]
¡û
>W1711357597
MDHK01000085
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHK]
8663
8590
-
Gly
CCC
[ENA]
¡û
>W1711357598
MDHK01000088
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHK]
3002
2931
-
Gly
CCC
[ENA]
¡û
>W1711357629
MDHL01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHL]
3257075
3257148
+
Gly
CCC
[ENA]
¡û
>W1711357673
MDHM01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHM]
3205263
3205336
+
Gly
CCC
[ENA]
¡û
>W1711360712
MDJW01000009
Actinomycetota
Clavibacter michiganensis [MDJW]
156268
156195
-
Gly
CCC
[ENA]
¡û
>W1711360768
MDJX01000314
Actinomycetota
Clavibacter michiganensis [MDJX]
27082
27009
-
Gly
CCC
[ENA]
¡û
>W1711360812
MDJY01000060
Actinomycetota
Clavibacter michiganensis [MDJY]
248583
248510
-
Gly
CCC
[ENA]
¡û
>W1711360852
MDJZ01000017
Actinomycetota
Clavibacter michiganensis [MDJZ]
310128
310201
+
Gly
CCC
[ENA]
¡û
>W1711461352
MJGS01000006
Actinomycetota
Frigoribacterium sp. MCBA15_019 [MJGS]
37158
37085
-
Gly
CCC
[ENA]
¡û
>W1711505307
MKVJ01000021
Actinomycetota
Leifsonia sp. 71-9 [MKVJ]
89687
89614
-
Gly
CCC
[ENA]
¡û
>WENV010884
AACY020295321
Marine microbial communities from Global Ocean Sampling (GOS)
1670
1595
-
Gly
CCC
[ENA]
>W1711747225
MUKN01000062
Actinomycetota
Rathayibacter sp. VKM Ac-2630 [MUKN]
17975
17902
-
Gly
CCC
[ENA]
¡û
>W1711961738
NCSR01000003
Actinomycetota
Leifsonia sp. NCR5 [NCSR]
107108
107179
+
Gly
CCC
[ENA]
¡û
>C006155
AM711867
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NCPPB 382 [AM711867]
3224558
3224631
+
Gly
CCC
[Ensembl]
¡û
>C012827
AE016822
Actinomycetota
Leifsonia xyli subsp. xyli str. CTCB07 [AE016822]
2447451
2447524
+
Gly
CCC
[Ensembl]
¡û
>WENV180016185
FSUF01000022
[FSUF] metagenome; soil
383
312
-
Gly
CCC
[ENA]
¢þ
>WENV180017349
FSWU01000011
[FSWU] metagenome; soil
13883
13954
+
Gly
CCC
[ENA]
¢þ
>WENV180018942
FTBD01000096
[FTBD] metagenome; soil
2231
2159
-
Gly
CCC
[ENA]
¢þ
>WENV180019354
FTBU01001796
[FTBU] metagenome; soil
796
724
-
Gly
CCC
[ENA]
¢þ
>WENV180101081
OAOU01000280
[OAOU] marine metagenome; ENVO:00002010 SEAWATER
3065
2992
-
Gly
CCC
[ENA]
¢þ
>WENV180103064
OAPA01000893
[OAPA] marine metagenome; ENVO:00002010
1722
1651
-
Gly
CCC
[ENA]
¢þ
>WENV180114195
OAPS01000350
[OAPS] marine metagenome; sea water
4297
4368
+
Gly
CCC
[ENA]
¢þ
>WENV180209088
OBAK01014561
[OBAK] marine metagenome; ENVO.00002150
527
598
+
Gly
CCC
[ENA]
¢þ
>WENV180209869
OBAL01032101
[OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER
2
73
+
Gly
CCC
[ENA]
¢þ
>WENV180212273
OBAN01003428
[OBAN] marine metagenome; ENVO 00002150
229
158
-
Gly
CCC
[ENA]
¢þ
>WENV180358220
OBNP01011853
[OBNP] marine metagenome; seawater
497
424
-
Gly
CCC
[ENA]
¢þ
>WENV180360720
OBNU01014894
[OBNU] marine metagenome; ENVO:00000021 'freshwater lake
341
412
+
Gly
CCC
[ENA]
¢þ
>WENV180361967
OBNW01015068
[OBNW] marine metagenome; ENVO:00002010, 'SEA WATER
557
630
+
Gly
CCC
[ENA]
¢þ
>WENV180362045
OBNW01026540
[OBNW] marine metagenome; ENVO:00002010, 'SEA WATER
138
209
+
Gly
CCC
[ENA]
¢þ
>WENV180380463
OBOQ01068013
[OBOQ] marine metagenome; Fridge
244
173
-
Gly
CCC
[ENA]
¢þ
>WENV180391581
OBPN01009038
[OBPN] marine metagenome; seawater
337
408
+
Gly
CCC
[ENA]
¢þ
>WENV180394458
OBPS01007086
[OBPS] marine metagenome; ENVO:00002010 seawater
260
189
-
Gly
CCC
[ENA]
¢þ
>WENV180395051
OBPT01000883
[OBPT] marine metagenome; ENVO:00002010 seawater
3009
2938
-
Gly
CCC
[ENA]
¢þ
>WENV180585764
OCOL01103981
[OCOL] marine metagenome; ENVO:00002010
154
83
-
Gly
CCC
[ENA]
¢þ
>WENV180635304
OCRD01006885
[OCRD] marine metagenome; seawater
596
669
+
Gly
CCC
[ENA]
¢þ
>WENV180641756
OCRN01036425
[OCRN] marine metagenome; ENVO:00002010, 'SEA WATER
237
310
+
Gly
CCC
[ENA]
¢þ
>WENV181126183
OEFV01015432
[OEFV] marine metagenome; Particulate matter on a 0.22 Um pore size filter
327
256
-
Gly
CCC
[ENA]
¢þ
>W141146511
AWVQ01000407
Actinomycetota
Leifsonia aquatica ATCC 14665 [AWVQ]
2326
2253
-
Gly
CCC
[ENA]
¡û
>W141188410
AYMR01000011
Actinomycetota
Leifsonia aquatica H1aii [AYMR]
40010
40083
+
Gly
CCC
[ENA]
¡û
>W141212777
AZQZ01000003
Actinomycetota
Clavibacter michiganensis michiganensis LMG 26808 [AZQZ]
142098
142025
-
Gly
CCC
[ENA]
¡û
>WENV018952
AACY020523089
Marine microbial communities from Global Ocean Sampling (GOS)
279
204
-
Gly
CCC
[ENA]
>WENV019029
AACY020524406
Marine microbial communities from Global Ocean Sampling (GOS)
942
867
-
Gly
CCC
[ENA]
>WENV019183
AACY020527064
Marine microbial communities from Global Ocean Sampling (GOS)
1521
1446
-
Gly
CCC
[ENA]
>C08003559
AM849034
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus ATCC 33113 [AM849034]
3182552
3182625
+
Gly
CCC
[Ensembl]
¡û
>WENV019404
AACY020531573
Marine microbial communities from Global Ocean Sampling (GOS)
497
422
-
Gly
CCC
[ENA]
>WENV019442
AACY020532417
Marine microbial communities from Global Ocean Sampling (GOS)
1217
1292
+
Gly
CCC
[ENA]
>WENV019711
AACY020537568
Marine microbial communities from Global Ocean Sampling (GOS)
1932
2007
+
Gly
CCC
[ENA]
>WENV183511990
OMJW01001038
[OMJW] termite gut metagenome; termite gut
1816
1745
-
Gly
CCC
[ENA]
¢þ
>WENV183697799
OUNK010121892
[OUNK] metagenome; soil
2262
2333
+
Gly
CCC
[ENA]
¢þ
>WENV170133645
CENU01039825
[CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
133
60
-
Gly
CCC
[ENA]
¢þ
>C181048891
CP021034
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-3 [CP021034]
3116793
3116866
+
Gly
CCC
-
¡û
>C181048936
CP021038
Actinomycetota
Clavibacter michiganensis subsp. insidiosus ATCC 10253 [CP021038]
3110252
3110325
+
Gly
CCC
-
¡û
>C181143712
CP026923
Actinomycetota
Pontimonas salivibrio CL-TW6 [CP026923]
106453
106526
+
Gly
CCC
-
¡û
>C191056241
CP028129
Actinomycetota
Rathayibacter rathayi DSM 7485 [CP028129]
82689
82617
-
Gly
CCC
-
¡û
>C191056258
CP028130
Actinomycetota
Rathayibacter iranicus NCCPB 2253 [CP028130]
2242163
2242236
+
Gly
CCC
-
¡û
>C191056518
CP028137
Actinomycetota
Rathayibacter festucae DSM 15932 [CP028137]
4276700
4276628
-
Gly
CCC
-
¡û
>C141007901
CP006734
Actinomycetota
Leifsonia xyli subsp. cynodontis DSM 46306 [CP006734]
2509905
2509978
+
Gly
CCC
[Ensembl]
¡û
>W1910839664
MZMM01000001
Actinomycetota
Clavibacter sepedonicus subsp. sepedonicus CFIA-Cs3N [MZMM]
2121935
2122008
+
Gly
CCC
[ENA]
¡û
>W1910839703
MZMN01000003
Actinomycetota
Clavibacter sepedonicus subsp. sepedonicus CFIA-CsR14 [MZMN]
1713819
1713892
+
Gly
CCC
[ENA]
¡û
>W1910839776
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
323591
323518
-
Gly
CCC
[ENA]
¡û
>W1910839817
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
1142887
1142814
-
Gly
CCC
[ENA]
¡û
>W1911497487
OCNL01000003
Actinomycetota
Rathayibacter rathayi VKM Ac-1601 [OCNL]
107384
107312
-
Gly
CCC
[ENA]
¡û
>W1911748136
QWDZ01000008
Actinomycetota
Clavibacter michiganensis CFBP 1195 [QWDZ]
20435
20362
-
Gly
CCC
[ENA]
¡û
>W1911748174
QWEA01000021
Actinomycetota
Clavibacter michiganensis CFBP 6488 [QWEA]
1899
1972
+
Gly
CCC
[ENA]
¡û
>W1911748214
QWEB01000013
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
8060
8131
+
Gly
CCC
[ENA]
¡û
>W1911748262
QWEC01000011
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
15670
15597
-
Gly
CCC
[ENA]
¡û
>W1911748308
QWED01000009
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
930
1003
+
Gly
CCC
[ENA]
¡û
>W1911748365
QWEE01000052
Actinomycetota
Clavibacter californiensis subsp. californiensis CFBP 8216 [QWEE]
8173
8100
-
Gly
CCC
[ENA]
¡û
>W1911749562
QWGS01000004
Actinomycetota
Clavibacter phaseoli subsp. chilensis CFBP 8217 [QWGS]
15302
15229
-
Gly
CCC
[ENA]
¡û
>W1911749619
QWGT01000023
Actinomycetota
Clavibacter lycopersici CFBP 8615 [QWGT]
7636
7709
+
Gly
CCC
[ENA]
¡û
>W1911749651
QWGU01000009
Actinomycetota
Clavibacter lycopersici CFBP 8616 [QWGU]
6577
6650
+
Gly
CCC
[ENA]
¡û
>W1911749699
QWGV01000020
Actinomycetota
Clavibacter phaseoli subsp. phaseoli CFBP 8627 [QWGV]
5836
5764
-
Gly
CCC
[ENA]
¡û
>W1810090129
PGFF01000001
Actinomycetota
Diaminobutyricimonas aerilata DSM 27393 [PGFF]
3405685
3405758
+
Gly
CCC
[ENA]
¡û
>W1810276995
PSTL01000019
Actinomycetota
Rathayibacter sp. AY1A7 [PSTL]
10129
10058
-
Gly
CCC
[ENA]
¡û
>W1810277009
PSTM01000004
Actinomycetota
Rathayibacter sp. AY1A5 [PSTM]
149719
149790
+
Gly
CCC
[ENA]
¡û
>W1810277076
PSTN01000019
Actinomycetota
Rathayibacter sp. AY1A4 [PSTN]
62237
62308
+
Gly
CCC
[ENA]
¡û
>W1810277109
PSTO01000009
Actinomycetota
Rathayibacter sp. AY1A3 [PSTO]
52881
52810
-
Gly
CCC
[ENA]
¡û
>W1810277156
PSTP01000007
Actinomycetota
Rathayibacter sp. AY1A2 [PSTP]
174
102
-
Gly
CCC
[ENA]
¡û
>W1810277238
PSTR01000003
Actinomycetota
Clavibacter michiganensis AY1B2 [PSTR]
15424
15352
-
Gly
CCC
[ENA]
¡û
>W1810277295
PSTS01000017
Actinomycetota
Clavibacter michiganensis AY1A6 [PSTS]
5675
5602
-
Gly
CCC
[ENA]
¡û
>W1810277393
PSTV01000001
Actinomycetota
Clavibacter michiganensis Z002 [PSTV]
236040
236113
+
Gly
CCC
[ENA]
¡û
>W1810277483
PSTW01000030
Actinomycetota
Clavibacter michiganensis Z001 [PSTW]
260523
260596
+
Gly
CCC
[ENA]
¡û
>W1810277691
PSUB01000003
Actinomycetota
Rathayibacter sp. AY2B9 [PSUB]
144547
144618
+
Gly
CCC
[ENA]
¡û
>W1810277725
PSUC01000005
Actinomycetota
Rathayibacter sp. AY2B7 [PSUC]
27051
27122
+
Gly
CCC
[ENA]
¡û
>W1810277780
PSUD01000010
Actinomycetota
Rathayibacter rathayi AY2B6 [PSUD]
51611
51683
+
Gly
CCC
[ENA]
¡û
>W1810277814
PSUE01000004
Actinomycetota
Rathayibacter sp. AY2B5 [PSUE]
61099
61028
-
Gly
CCC
[ENA]
¡û
>W1810277854
PSUF01000002
Actinomycetota
Rathayibacter rathayi AY2B4 [PSUF]
25777
25705
-
Gly
CCC
[ENA]
¡û
>W1810277910
PSUG01000015
Actinomycetota
Rathayibacter sp. AY2B3 [PSUG]
42692
42621
-
Gly
CCC
[ENA]
¡û
>W1810277935
PSUH01000003
Actinomycetota
Rathayibacter sp. AY2B1 [PSUH]
11697
11626
-
Gly
CCC
[ENA]
¡û
>W1810277989
PSUI01000007
Actinomycetota
Rathayibacter rathayi AY2A9 [PSUI]
46637
46565
-
Gly
CCC
[ENA]
¡û
>W1810278020
PSUJ01000003
Actinomycetota
Rathayibacter rathayi AY2A5 [PSUJ]
133862
133934
+
Gly
CCC
[ENA]
¡û
>W1810278083
PSUK01000018
Actinomycetota
Rathayibacter rathayi AY2A3 [PSUK]
51704
51776
+
Gly
CCC
[ENA]
¡û
>W1810278112
PSUL01000004
Actinomycetota
Rathayibacter rathayi AY1I9 [PSUL]
4848
4776
-
Gly
CCC
[ENA]
¡û
>W1810278178
PSUM01000035
Actinomycetota
Rathayibacter tritici ATCC 11402 [PSUM]
19019
18946
-
Gly
CCC
[ENA]
¡û
>W1810278218
PSUN01000010
Actinomycetota
Rathayibacter tritici GSPB 2752 [PSUN]
19005
18932
-
Gly
CCC
[ENA]
¡û
>W1810278272
PSUO01000018
Actinomycetota
Rathayibacter tritici GSPB 2748 [PSUO]
44589
44516
-
Gly
CCC
[ENA]
¡û
>W1810278303
PSUP01000017
Actinomycetota
Rathayibacter rathayi ICMP 2576 [PSUP]
51667
51739
+
Gly
CCC
[ENA]
¡û
>W1810278321
PSUQ01000002
Actinomycetota
Rathayibacter rathayi ICMP 2572 [PSUQ]
46528
46456
-
Gly
CCC
[ENA]
¡û
>W1810278385
PSUR01000018
Actinomycetota
Rathayibacter rathayi AY1H7 [PSUR]
51676
51748
+
Gly
CCC
[ENA]
¡û
>W1810278428
PSUS01000010
Actinomycetota
Rathayibacter rathayi AY1H6 [PSUS]
47436
47508
+
Gly
CCC
[ENA]
¡û
>W1810278454
PSUT01000003
Actinomycetota
Rathayibacter rathayi AY1H5 [PSUT]
124764
124836
+
Gly
CCC
[ENA]
¡û
>W1810278496
PSUU01000004
Actinomycetota
Rathayibacter sp. AY1H3 [PSUU]
103000
103071
+
Gly
CCC
[ENA]
¡û
>W1810278560
PSUV01000011
Actinomycetota
Rathayibacter sp. AY1H2 [PSUV]
61130
61059
-
Gly
CCC
[ENA]
¡û
>W1810278592
PSUW01000005
Actinomycetota
Rathayibacter sp. AY1G9 [PSUW]
39936
39865
-
Gly
CCC
[ENA]
¡û
>W1810278641
PSUX01000014
Actinomycetota
Rathayibacter rathayi AY1G7 [PSUX]
51613
51685
+
Gly
CCC
[ENA]
¡û
>W1810278668
PSUY01000002
Actinomycetota
Rathayibacter rathayi AY1G4 [PSUY]
292052
292124
+
Gly
CCC
[ENA]
¡û
>W1810278719
PSUZ01000006
Actinomycetota
Rathayibacter sp. AY1G1 [PSUZ]
62003
61932
-
Gly
CCC
[ENA]
¡û
>W1810278776
PSVA01000010
Actinomycetota
Rathayibacter sp. AY1F9 [PSVA]
51804
51733
-
Gly
CCC
[ENA]
¡û
>W1810278809
PSVB01000005
Actinomycetota
Rathayibacter sp. AY1F8 [PSVB]
149072
149143
+
Gly
CCC
[ENA]
¡û
>W1810278848
PSVC01000004
Actinomycetota
Rathayibacter sp. AY1F7 [PSVC]
143570
143641
+
Gly
CCC
[ENA]
¡û
>W1810278893
PSVD01000004
Actinomycetota
Rathayibacter sp. AY1F6 [PSVD]
107932
107861
-
Gly
CCC
[ENA]
¡û
>W1810278957
PSVE01000013
Actinomycetota
Rathayibacter sp. AY1F4 [PSVE]
62290
62361
+
Gly
CCC
[ENA]
¡û
>W1810278976
PSVF01000005
Actinomycetota
Rathayibacter sp. AY1F3 [PSVF]
145061
145132
+
Gly
CCC
[ENA]
¡û
>W1810279019
PSVG01000003
Actinomycetota
Rathayibacter sp. AY1F2 [PSVG]
143037
142966
-
Gly
CCC
[ENA]
¡û
>W1810279063
PSVH01000003
Actinomycetota
Rathayibacter sp. AY1E9 [PSVH]
156476
156547
+
Gly
CCC
[ENA]
¡û
>W1810279119
PSVI01000016
Actinomycetota
Rathayibacter sp. AY1E8 [PSVI]
39232
39161
-
Gly
CCC
[ENA]
¡û
>W1810279139
PSVJ01000001
Actinomycetota
Rathayibacter rathayi AY1E7 [PSVJ]
242956
243028
+
Gly
CCC
[ENA]
¡û
>W1810279199
PSVK01000005
Actinomycetota
Rathayibacter sp. AY1E6 [PSVK]
61653
61582
-
Gly
CCC
[ENA]
¡û
>W1810279236
PSVL01000008
Actinomycetota
Rathayibacter sp. AY1E5 [PSVL]
102653
102724
+
Gly
CCC
[ENA]
¡û
>W1810279267
PSVM01000001
Actinomycetota
Rathayibacter sp. AY1E4 [PSVM]
144127
144198
+
Gly
CCC
[ENA]
¡û
>W1810279330
PSVN01000006
Actinomycetota
Rathayibacter sp. AY1E3 [PSVN]
144620
144691
+
Gly
CCC
[ENA]
¡û
>W1810279368
PSVO01000004
Actinomycetota
Rathayibacter sp. AY1E2 [PSVO]
145636
145707
+
Gly
CCC
[ENA]
¡û
>W1810279395
PSVP01000002
Actinomycetota
Rathayibacter sp. AY1E1 [PSVP]
8966
8895
-
Gly
CCC
[ENA]
¡û
>W1810279476
PSVQ01000030
Actinomycetota
Rathayibacter sp. AY1D9 [PSVQ]
30701
30772
+
Gly
CCC
[ENA]
¡û
>W1810279484
PSVR01000003
Actinomycetota
Rathayibacter rathayi AY1D8 [PSVR]
125226
125298
+
Gly
CCC
[ENA]
¡û
>W1810279549
PSVS01000046
Actinomycetota
Rathayibacter sp. AY1D7 [PSVS]
18036
18107
+
Gly
CCC
[ENA]
¡û
>W1810279596
PSVT01000021
Actinomycetota
Rathayibacter rathayi AY1D6 [PSVT]
4824
4752
-
Gly
CCC
[ENA]
¡û
>W1810279623
PSVU01000013
Actinomycetota
Rathayibacter sp. AY1D5 [PSVU]
62253
62324
+
Gly
CCC
[ENA]
¡û
>W1810279661
PSVV01000003
Actinomycetota
Rathayibacter sp. AY1D4 [PSVV]
86410
86339
-
Gly
CCC
[ENA]
¡û
>W1810279715
PSVW01000005
Actinomycetota
Rathayibacter sp. AY1D3 [PSVW]
144647
144718
+
Gly
CCC
[ENA]
¡û
>W1810279772
PSVX01000050
Actinomycetota
Rathayibacter sp. AY1D2 [PSVX]
9484
9413
-
Gly
CCC
[ENA]
¡û
>W1810279798
PSVY01000004
Actinomycetota
Rathayibacter sp. AY1D1 [PSVY]
144486
144557
+
Gly
CCC
[ENA]
¡û
>W1810279863
PSVZ01000019
Actinomycetota
Rathayibacter sp. AY1C9 [PSVZ]
30661
30732
+
Gly
CCC
[ENA]
¡û
>W1810279894
PSWA01000010
Actinomycetota
Rathayibacter rathayi AY1C8 [PSWA]
47521
47593
+
Gly
CCC
[ENA]
¡û
>W1810279938
PSWB01000011
Actinomycetota
Rathayibacter sp. AY1C7 [PSWB]
97121
97192
+
Gly
CCC
[ENA]
¡û
>W1810279965
PSWC01000004
Actinomycetota
Rathayibacter sp. AY1C6 [PSWC]
74202
74131
-
Gly
CCC
[ENA]
¡û
>W1810280026
PSWD01000007
Actinomycetota
Rathayibacter sp. AY1C5 [PSWD]
30707
30778
+
Gly
CCC
[ENA]
¡û
>W1810280050
PSWE01000004
Actinomycetota
Rathayibacter sp. AY1C4 [PSWE]
102575
102646
+
Gly
CCC
[ENA]
¡û
>W1810280114
PSWF01000016
Actinomycetota
Rathayibacter sp. AY1C3 [PSWF]
9526
9455
-
Gly
CCC
[ENA]
¡û
>W1810280140
PSWG01000004
Actinomycetota
Rathayibacter sp. AY1C2 [PSWG]
60435
60364
-
Gly
CCC
[ENA]
¡û
>W1810280185
PSWH01000006
Actinomycetota
Rathayibacter sp. AY1C1 [PSWH]
52259
52188
-
Gly
CCC
[ENA]
¡û
>W1810280236
PSWI01000012
Actinomycetota
Rathayibacter rathayi AY1B9 [PSWI]
4820
4748
-
Gly
CCC
[ENA]
¡û
>W1810280269
PSWJ01000004
Actinomycetota
Rathayibacter sp. AY1B8 [PSWJ]
62373
62446
+
Gly
CCC
[ENA]
¡û
>W1810280305
PSWK01000002
Actinomycetota
Rathayibacter sp. AY1B7 [PSWK]
60931
60860
-
Gly
CCC
[ENA]
¡û
>W1810280357
PSWL01000008
Actinomycetota
Rathayibacter sp. AY1B6 [PSWL]
62516
62587
+
Gly
CCC
[ENA]
¡û
>W1810280411
PSWM01000009
Actinomycetota
Rathayibacter sp. AY1B5 [PSWM]
55243
55172
-
Gly
CCC
[ENA]
¡û
>W1810280468
PSWN01000017
Actinomycetota
Rathayibacter sp. AY1B4 [PSWN]
62431
62502
+
Gly
CCC
[ENA]
¡û
>W1810280480
PSWO01000004
Actinomycetota
Rathayibacter sp. AY1B1 [PSWO]
113033
113104
+
Gly
CCC
[ENA]
¡û
>W1810280529
PSWP01000010
Actinomycetota
Rathayibacter rathayi AY1A8 [PSWP]
25787
25715
-
Gly
CCC
[ENA]
¡û
>W1810280565
PSWQ01000014
Actinomycetota
Rathayibacter sp. RFBD1 [PSWQ]
73715
73644
-
Gly
CCC
[ENA]
¡û
>W1810280620
PSWR01000065
Actinomycetota
Rathayibacter sp. TRS19 [PSWR]
9988
9917
-
Gly
CCC
[ENA]
¡û
>W1810280663
PSWS01000038
Actinomycetota
Rathayibacter tritici DSM 7486 [PSWS]
18975
18902
-
Gly
CCC
[ENA]
¡û
>W1810280706
PSWT01000033
Actinomycetota
Rathayibacter tritici ICMP 2628 [PSWT]
19185
19112
-
Gly
CCC
[ENA]
¡û
>W1810280765
PSWU01000004
Actinomycetota
Rathayibacter toxicus FH99 [PSWU]
80470
80398
-
Gly
CCC
[ENA]
¡û
>W1810280808
PSWV01000005
Actinomycetota
Rathayibacter toxicus FH89 [PSWV]
79601
79529
-
Gly
CCC
[ENA]
¡û
>W1810280851
PSWW01000005
Actinomycetota
Rathayibacter toxicus FH86 [PSWW]
79601
79529
-
Gly
CCC
[ENA]
¡û
>W1810280894
PSWX01000004
Actinomycetota
Rathayibacter toxicus FH85 [PSWX]
80472
80400
-
Gly
CCC
[ENA]
¡û
>W1810280937
PSWY01000005
Actinomycetota
Rathayibacter toxicus FH82 [PSWY]
77027
76955
-
Gly
CCC
[ENA]
¡û
>W1810280980
PSWZ01000004
Actinomycetota
Rathayibacter toxicus FH81 [PSWZ]
79972
79900
-
Gly
CCC
[ENA]
¡û
>W1810281023
PSXA01000003
Actinomycetota
Rathayibacter toxicus FH78 [PSXA]
74557
74485
-
Gly
CCC
[ENA]
¡û
>W1810281066
PSXB01000002
Actinomycetota
Rathayibacter toxicus FH183 [PSXB]
141192
141120
-
Gly
CCC
[ENA]
¡û
>W1810281121
PSXC01000005
Actinomycetota
Rathayibacter toxicus FH149 [PSXC]
79336
79264
-
Gly
CCC
[ENA]
¡û
>W1810281164
PSXD01000003
Actinomycetota
Rathayibacter toxicus FH147 [PSXD]
80471
80399
-
Gly
CCC
[ENA]
¡û
>W1810281207
PSXE01000005
Actinomycetota
Rathayibacter toxicus FH146 [PSXE]
79972
79900
-
Gly
CCC
[ENA]
¡û
>W1810281250
PSXF01000004
Actinomycetota
Rathayibacter toxicus FH145 [PSXF]
76928
76856
-
Gly
CCC
[ENA]
¡û
>W1810281293
PSXG01000004
Actinomycetota
Rathayibacter toxicus FH142 [PSXG]
79601
79529
-
Gly
CCC
[ENA]
¡û
>W1810281336
PSXH01000003
Actinomycetota
Rathayibacter toxicus FH141 [PSXH]
80633
80561
-
Gly
CCC
[ENA]
¡û
>W1810281379
PSXI01000005
Actinomycetota
Rathayibacter toxicus FH140 [PSXI]
79972
79900
-
Gly
CCC
[ENA]
¡û
>W1810281423
PSXJ01000005
Actinomycetota
Rathayibacter toxicus FH139 [PSXJ]
79601
79529
-
Gly
CCC
[ENA]
¡û
>W1810281466
PSXK01000005
Actinomycetota
Rathayibacter toxicus FH138 [PSXK]
79336
79264
-
Gly
CCC
[ENA]
¡û
>W1810281509
PSXL01000004
Actinomycetota
Rathayibacter toxicus FH137 [PSXL]
80470
80398
-
Gly
CCC
[ENA]
¡û
>W1810281549
PSXM01000004
Actinomycetota
Rathayibacter toxicus FH128 [PSXM]
78746
78674
-
Gly
CCC
[ENA]
¡û
>W1810281584
PSXN01000005
Actinomycetota
Rathayibacter toxicus FH100 [PSXN]
77032
76960
-
Gly
CCC
[ENA]
¡û
>W1810281625
PSXO01000008
Actinomycetota
Rathayibacter rathayi Z022 [PSXO]
4837
4765
-
Gly
CCC
[ENA]
¡û
>W1810281668
PSXP01000002
Actinomycetota
Rathayibacter rathayi Z015 [PSXP]
64530
64458
-
Gly
CCC
[ENA]
¡û
>W1810281711
PSXQ01000009
Actinomycetota
Rathayibacter rathayi Z007 [PSXQ]
25784
25712
-
Gly
CCC
[ENA]
¡û
>W1810281754
PSXR01000008
Actinomycetota
Rathayibacter rathayi CS6 [PSXR]
4819
4747
-
Gly
CCC
[ENA]
¡û
>W1810281826
PSXS01000030
Actinomycetota
Rathayibacter iranicus DSM 7484 [PSXS]
218975
219048
+
Gly
CCC
[ENA]
¡û
>W1810281871
PSXT01000038
Actinomycetota
Rathayibacter iranicus TRS5 [PSXT]
10090
10163
+
Gly
CCC
[ENA]
¡û
>W1810281914
PSXU01000045
Actinomycetota
Rathayibacter iranicus FH154 [PSXU]
10101
10174
+
Gly
CCC
[ENA]
¡û
>W1810281935
PSXV01000007
Actinomycetota
Rathayibacter sp. AY1A1 [PSXV]
62294
62365
+
Gly
CCC
[ENA]
¡û
>W1810282065
PSXY01000003
Actinomycetota
Clavibacter michiganensis AY1B3 [PSXY]
92836
92909
+
Gly
CCC
[ENA]
¡û
>W1810452341
PZPL01000001
Actinomycetota
Rathayibacter caricis DSM 15933 [PZPL]
1761916
1761844
-
Gly
CCC
[ENA]
¡û
>W1810595372
QGDV01000003
Actinomycetota
Rathayibacter iranicus VKM Ac-1602 [QGDV]
49024
48951
-
Gly
CCC
[ENA]
¡û
>W1810860772
QTTK01000001
Actinomycetota
Clavibacter sp. 199 [QTTK]
1206840
1206767
-
Gly
CCC
[ENA]
¡û
>SRA1015021
SRR023845.424782
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
250
179
-
Gly
CCC
[SRA]
>C151073266
CP010848
Actinomycetota
Rathayibacter toxicus 70137 [CP010848]
433175
433102
-
Gly
CCC
[Ensembl]
¡û
>C151075651
CP011043
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-1 [CP011043]
3130847
3130920
+
Gly
CCC
[Ensembl]
¡û
>C151095711
CP012573
Actinomycetota
Clavibacter capsici PF008 [CP012573]
2978336
2978409
+
Gly
CCC
-
¡û
>WENV029778
AACY021227756
Marine microbial communities from Global Ocean Sampling (GOS)
244
319
+
Gly
CCC
[ENA]
>WENV029945
AACY021242642
Marine microbial communities from Global Ocean Sampling (GOS)
674
599
-
Gly
CCC
[ENA]
>WENV037106
AACY021832669
Marine microbial communities from Global Ocean Sampling (GOS)
739
814
+
Gly
CCC
[ENA]
>WENV041252
AACY022144030
Marine microbial communities from Global Ocean Sampling (GOS)
262
337
+
Gly
CCC
[ENA]
>W1511352428
JROD01000002
Actinomycetota
Clavibacter michiganensis CF11 [JROD]
138533
138460
-
Gly
CCC
[ENA]
¡û
>WENV042960
AACY022279351
Marine microbial communities from Global Ocean Sampling (GOS)
198
123
-
Gly
CCC
[ENA]
>WENV043945
AACY022372395
Marine microbial communities from Global Ocean Sampling (GOS)
255
330
+
Gly
CCC
[ENA]
>W1511509372
JXQZ01000016
Actinomycetota
Frigoribacterium sp. MEB024 [JXQZ]
20797
20868
+
Gly
CCC
[ENA]
¡û
>W1511570107
LAKL01000027
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis DOAB 397 [LAKL]
127244
127317
+
Gly
CCC
[ENA]
¡û
>W1511589852
LBFI01000024
Actinomycetota
Rathayibacter toxicus FH142 [LBFI]
77984
77911
-
Gly
CCC
[ENA]
¡û
>WENV046205
AACY022580745
Marine microbial communities from Global Ocean Sampling (GOS)
77
152
+
Gly
CCC
[ENA]
>WENV046647
AACY022614388
Marine microbial communities from Global Ocean Sampling (GOS)
208
281
+
Gly
CCC
[ENA]
>WENV047294
AACY022654387
Marine microbial communities from Global Ocean Sampling (GOS)
657
584
-
Gly
CCC
[ENA]
>WENV050850
AACY022909548
Marine microbial communities from Global Ocean Sampling (GOS)
740
815
+
Gly
CCC
[ENA]
>WENV050955
AACY022917949
Marine microbial communities from Global Ocean Sampling (GOS)
26
101
+
Gly
CCC
[ENA]
>WENV050956
AACY022917950
Marine microbial communities from Global Ocean Sampling (GOS)
279
354
+
Gly
CCC
[ENA]
>WENV051008
AACY022922189
Marine microbial communities from Global Ocean Sampling (GOS)
218
293
+
Gly
CCC
[ENA]
>C161054995
CP013292
Actinomycetota
Rathayibacter toxicus WAC3373 [CP013292]
995073
995146
+
Gly
CCC
-
¡û
>C161073111
CP014513
Actinomycetota
Frondihabitans sp. PAMC 28766 [CP014513]
552144
552215
+
Gly
CCC
[Ensembl]
¡û
>C161076854
CP014761
Actinomycetota
Leifsonia xyli SE134 [CP014761]
1960795
1960868
+
Gly
CCC
[Ensembl]
¡û
>C161089177
CP015515
Actinomycetota
Rathayibacter tritici NCPPB 1953 [CP015515]
418899
418826
-
Gly
CCC
[Ensembl]
¡û
>WENV058319
AACY023324695
Marine microbial communities from Global Ocean Sampling (GOS)
302
375
+
Gly
CCC
[ENA]
>WENV069957
AACY023790843
Marine microbial communities from Global Ocean Sampling (GOS)
1462
1387
-
Gly
CCC
[ENA]
>WENV069965
AACY023791094
Marine microbial communities from Global Ocean Sampling (GOS)
688
763
+
Gly
CCC
[ENA]
>WENV070096
AACY023796995
Marine microbial communities from Global Ocean Sampling (GOS)
1066
1141
+
Gly
CCC
[ENA]
>WENV070271
AACY023803531
Marine microbial communities from Global Ocean Sampling (GOS)
1268
1343
+
Gly
CCC
[ENA]
>WENV070332
AACY023805422
Marine microbial communities from Global Ocean Sampling (GOS)
930
1005
+
Gly
CCC
[ENA]
>WENV070648
AACY023817300
Marine microbial communities from Global Ocean Sampling (GOS)
1101
1026
-
Gly
CCC
[ENA]
>WENV070724
AACY023820194
Marine microbial communities from Global Ocean Sampling (GOS)
1035
960
-
Gly
CCC
[ENA]
>WENV070894
AACY023827404
Marine microbial communities from Global Ocean Sampling (GOS)
453
378
-
Gly
CCC
[ENA]
>WENV071002
AACY023831325
Marine microbial communities from Global Ocean Sampling (GOS)
1341
1416
+
Gly
CCC
[ENA]
>WENV071036
AACY023832658
Marine microbial communities from Global Ocean Sampling (GOS)
147
222
+
Gly
CCC
[ENA]
>WENV071074
AACY023834399
Marine microbial communities from Global Ocean Sampling (GOS)
735
660
-
Gly
CCC
[ENA]
>C131019542
HE614873
Actinomycetota
Clavibacter nebraskensis NCPPB 2581 type strain: NCPPB 2581 [HE614873]
2989171
2989244
+
Gly
CCC
[Ensembl]
¡û
>WENV071247
AACY023840323
Marine microbial communities from Global Ocean Sampling (GOS)
573
498
-
Gly
CCC
[ENA]
>WENV071360
AACY023844135
Marine microbial communities from Global Ocean Sampling (GOS)
1321
1396
+
Gly
CCC
[ENA]
>WENV071373
AACY023844859
Marine microbial communities from Global Ocean Sampling (GOS)
63
138
+
Gly
CCC
[ENA]
>W1610620592
LHOZ01000023
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
28293
28364
+
Gly
CCC
[ENA]
¡û
>W1610630627
LIIN01000129
Actinomycetota
Rathayibacter tanaceti [LIIN]
3388
3459
+
Gly
CCC
[ENA]
¡û
>W1610730143
LMIO01000004
Actinomycetota
Leifsonia sp. Root227 [LMIO]
534397
534326
-
Gly
CCC
[ENA]
¡û
>W1610732213
LMKB01000001
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
796004
796075
+
Gly
CCC
[ENA]
¡û
>W1610733728
LMLG01000006
Actinomycetota
Frigoribacterium sp. Leaf44 [LMLG]
82757
82686
-
Gly
CCC
[ENA]
¡û
>W1610735085
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
2941425
2941496
+
Gly
CCC
[ENA]
¡û
>W1610736719
LMNO01000001
Actinomycetota
Rathayibacter sp. Leaf294 [LMNO]
436834
436907
+
Gly
CCC
[ENA]
¡û
>W1610736871
LMNR01000001
Actinomycetota
Rathayibacter sp. Leaf296 [LMNR]
626761
626688
-
Gly
CCC
[ENA]
¡û
>W1610736945
LMNT01000001
Actinomycetota
Rathayibacter sp. Leaf299 [LMNT]
744598
744525
-
Gly
CCC
[ENA]
¡û
>W1610738511
LMOZ01000003
Actinomycetota
Leifsonia sp. Leaf336 [LMOZ]
810534
810461
-
Gly
CCC
[ENA]
¡û
>W1610739184
LMPP01000001
Actinomycetota
Rathayibacter sp. Leaf185 [LMPP]
436697
436770
+
Gly
CCC
[ENA]
¡û
>W1610739249
LMPQ01000010
Actinomycetota
Frigoribacterium sp. Leaf186 [LMPQ]
808749
808820
+
Gly
CCC
[ENA]
¡û
>W1610740466
LMQR01000001
Actinomycetota
Frigoribacterium sp. Leaf415 [LMQR]
2940691
2940762
+
Gly
CCC
[ENA]
¡û
>W1610867023
LQXA01000019
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
155423
155350
-
Gly
CCC
[ENA]
¡û
>WENV076785
AACY024109338
Marine microbial communities from Global Ocean Sampling (GOS)
1136
1061
-
Gly
CCC
[ENA]
>WENV076787
AACY024109522
Marine microbial communities from Global Ocean Sampling (GOS)
232
307
+
Gly
CCC
[ENA]
>W1710540812
FNXD01000016
Actinomycetota
Leifsonia sp. CL154 [FNXD]
81156
81229
+
Gly
CCC
[ENA]
¡û
>W1710568286
FOTM01000016
Actinomycetota
Leifsonia sp. CL147 [FOTM]
4372
4299
-
Gly
CCC
[ENA]
¡û
>W1710608949
FXBM01000001
Actinomycetota
Rathayibacter oskolensis VKM Ac-2121 [FXBM]
250886
250813
-
Gly
CCC
[ENA]
¡û
>W1710748286
LHOZ01000023
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
28293
28364
+
Gly
CCC
[ENA]
¡û
>W1710761766
LIIN01000129
Actinomycetota
Rathayibacter tanaceti [LIIN]
3388
3459
+
Gly
CCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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