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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.419639 (3 seq.)
>W1511608556
LCEC01000006
Unclassified
Parcubacteria group bacterium GW2011_GWB1_42_6 GW2011_GWB1_42_6 [LCEC]
14547
14621
+
Glu
TTC
[ENA]
¡û
>W1511608732
LCEI01000037
Unclassified
Parcubacteria group bacterium GW2011_GWA1_42_7 GW2011_GWA1_42_7 [LCEI]
1073
1147
+
Glu
TTC
[ENA]
¡û
>W1511609496
LCFJ01000005
Unclassified
Parcubacteria group bacterium GW2011_GWC1_43_12 GW2011_GWC1_43_12 [LCFJ]
13880
13954
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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