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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.425638 (4 seq.)
>W1930012897
MEXF01000001
Unclassified
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_47_34 [MEXF]
11968
11895
-
Thr
GGT
[ENA]
¡û
>W1930012939
MEXM01000002
Unclassified
Candidatus Amesbacteria bacterium RIFCSPLOWO2_01_FULL_47_33 [MEXM]
9080
9007
-
Thr
GGT
[ENA]
¡û
>W2030018975
MEXF01000001
Unclassified
Candidatus Amesbacteria bacterium RIFCSPHIGHO2_01_FULL_47_34 [MEXF]
11968
11895
-
Thr
GGT
[ENA]
¡û
>W2030019017
MEXM01000002
Unclassified
Candidatus Amesbacteria bacterium RIFCSPLOWO2_01_FULL_47_33 [MEXM]
9080
9007
-
Thr
GGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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