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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.429443 (6 seq.)
>WENV180654975
OCVV010381916
[OCVV] gut metagenome; gut
80
8
-
Gln
TTG
[ENA]
¡û
>WENV180654976
OCVV010381916
[OCVV] gut metagenome; gut
80
8
-
Gln
TTG
[ENA]
¡û
>WENV180655242
OCVV010416855
[OCVV] gut metagenome; gut
80
8
-
Gln
TTG
[ENA]
¡û
>WENV180655244
OCVV010416855
[OCVV] gut metagenome; gut
80
8
-
Gln
TTG
[ENA]
¡û
>WENV180671339
OCVV011316294
[OCVV] gut metagenome; gut
11
83
+
Gln
TTG
[ENA]
¡û
>WENV180671351
OCVV011316294
[OCVV] gut metagenome; gut
11
83
+
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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