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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.429578 (5 seq.)
>WENV180001996
FLNX01004349
[FLNX] bioreactor metagenome; Moose rumen
18279
18352
+
Phe
GAA
[ENA]
¡û
>WENV180658427
OCVV010764338
[OCVV] gut metagenome; gut
255
183
-
Phe
GAA
[ENA]
¡û
>WENV180658428
OCVV010764338
[OCVV] gut metagenome; gut
255
183
-
Phe
GAA
[ENA]
¡û
>WENV180680455
OCVV012539386
[OCVV] gut metagenome; gut
209
137
-
Phe
GAA
[ENA]
¡û
>WENV180680456
OCVV012539386
[OCVV] gut metagenome; gut
209
137
-
Phe
GAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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