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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.448108 (211 seq.)
>W1710875762
LMOQ01000002
Actinomycetota
Agreia sp. Leaf335 [LMOQ]
230187
230114
-
Cys
GCA
[ENA]
¡û
>W1711018554
LQXA01000023
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
37047
37120
+
Cys
GCA
[ENA]
¡û
>W1711079605
LSOE01000006
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
318563
318490
-
Cys
GCA
[ENA]
¡û
>W131165748
ARBV01000008
Actinomycetota
Nonomuraea coxensis DSM 45129 [ARBV]
144092
144163
+
Cys
GCA
[ENA]
¡û
>W1711357179
MDHB01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHB]
292962
293035
+
Cys
GCA
[ENA]
¡û
>W1711357236
MDHC01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHC]
2034248
2034175
-
Cys
GCA
[ENA]
¡û
>W1711357289
MDHD01000417
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHD]
5888
5815
-
Cys
GCA
[ENA]
¡û
>W1711357322
MDHE01000355
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHE]
5886
5813
-
Cys
GCA
[ENA]
¡û
>W1711357364
MDHF01000206
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHF]
5871
5798
-
Cys
GCA
[ENA]
¡û
>W1711357420
MDHG01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHG]
420537
420464
-
Cys
GCA
[ENA]
¡û
>W1711357444
MDHH01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHH]
292962
293035
+
Cys
GCA
[ENA]
¡û
>W1711357493
MDHI01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHI]
1612207
1612134
-
Cys
GCA
[ENA]
¡û
>W1711357551
MDHJ01000001
Actinomycetota
Clavibacter michiganensis [MDHJ]
2068321
2068248
-
Cys
GCA
[ENA]
¡û
>W1711357575
MDHK01000023
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHK]
224752
224679
-
Cys
GCA
[ENA]
¡û
>W1711357641
MDHL01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHL]
2094704
2094631
-
Cys
GCA
[ENA]
¡û
>W1711357685
MDHM01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHM]
2044489
2044416
-
Cys
GCA
[ENA]
¡û
>W1711360717
MDJW01000012
Actinomycetota
Clavibacter michiganensis [MDJW]
38126
38199
+
Cys
GCA
[ENA]
¡û
>W1711360747
MDJX01000141
Actinomycetota
Clavibacter michiganensis [MDJX]
5452
5525
+
Cys
GCA
[ENA]
¡û
>W1711360807
MDJY01000058
Actinomycetota
Clavibacter michiganensis [MDJY]
31136
31063
-
Cys
GCA
[ENA]
¡û
>W1711360821
MDJZ01000002
Actinomycetota
Clavibacter michiganensis [MDJZ]
22668
22595
-
Cys
GCA
[ENA]
¡û
>C006167
AM711867
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NCPPB 382 [AM711867]
2060249
2060176
-
Cys
GCA
[Ensembl]
¡û
>WENV180017296
FSWR01000068
[FSWR] metagenome; soil
116394
116465
+
Cys
GCA
[ENA]
¡û
>W141212790
AZQZ01000045
Actinomycetota
Clavibacter michiganensis michiganensis LMG 26808 [AZQZ]
180008
180081
+
Cys
GCA
[ENA]
¡û
>W141223255
BADC01000055
Actinomycetota
Corynebacterium-like bacterium B27 [BADC]
11078
11005
-
Cys
GCA
[ENA]
¡û
>C08003542
AM849034
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus ATCC 33113 [AM849034]
756230
756303
+
Cys
GCA
[Ensembl]
¡û
>C181048881
CP021034
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-3 [CP021034]
1365110
1365181
+
Cys
GCA
-
¡û
>C181048948
CP021038
Actinomycetota
Clavibacter michiganensis subsp. insidiosus ATCC 10253 [CP021038]
1826053
1825982
-
Cys
GCA
-
¡û
>W141761136
JOAN01000008
Actinomycetota
Micromonospora chokoriensis [JOAN]
147106
147035
-
Cys
GCA
[ENA]
¡û
>W1910141857
BIFP01000016
Actinomycetota
Micromonosporaceae bacterium KJ-029 [BIFP]
5780
5709
-
Cys
GCA
[ENA]
¡û
>W1910839677
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2953205
2953278
+
Cys
GCA
[ENA]
¡û
>W1910839713
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
2631070
2631143
+
Cys
GCA
[ENA]
¡û
>W1910839747
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
1606682
1606753
+
Cys
GCA
[ENA]
¡û
>W1910839795
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
2303877
2303950
+
Cys
GCA
[ENA]
¡û
>W1910839840
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
2381724
2381795
+
Cys
GCA
[ENA]
¡û
>W1910857600
NBXB01000027
Actinomycetota
Subtercola boreus P27479 [NBXB]
197478
197407
-
Cys
GCA
[ENA]
¡û
>W1910857682
NBXD01000014
Actinomycetota
Subtercola boreus P27979 [NBXD]
441244
441173
-
Cys
GCA
[ENA]
¡û
>W1911539624
ONLN01000434
Actinomycetota
Thermobifida fusca [ONLN]
1343
1272
-
Cys
GCA
[ENA]
¡û
>W1911681895
QKLA01000008
Actinomycetota
Curtobacterium sp. MCPF17_050 [QKLA]
127041
127114
+
Cys
GCA
[ENA]
¡û
>W1911682070
QKLI01000001
Actinomycetota
Curtobacterium sp. MCBD17_030 [QKLI]
461852
461779
-
Cys
GCA
[ENA]
¡û
>W1911682120
QKLJ01000002
Actinomycetota
Curtobacterium sp. MCBD17_023 [QKLJ]
332696
332769
+
Cys
GCA
[ENA]
¡û
>W1911685193
QKSH01000001
Actinomycetota
Curtobacterium sp. MCPF17_021 [QKSH]
152275
152348
+
Cys
GCA
[ENA]
¡û
>W1911685280
QKSI01000027
Actinomycetota
Curtobacterium sp. MCPF17_002 [QKSI]
56740
56669
-
Cys
GCA
[ENA]
¡û
>W1911748129
QWDZ01000002
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
5881
5810
-
Cys
GCA
[ENA]
¡û
>W1911748190
QWEA01000224
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
638
709
+
Cys
GCA
[ENA]
¡û
>W1911748231
QWEB01000050
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
5370
5441
+
Cys
GCA
[ENA]
¡û
>W1911748285
QWEC01000072
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
5955
5882
-
Cys
GCA
[ENA]
¡û
>W1911748311
QWED01000021
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
5390
5461
+
Cys
GCA
[ENA]
¡û
>W1911748368
QWEE01000063
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
5896
5823
-
Cys
GCA
[ENA]
¡û
>W1911749575
QWGS01000036
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
5340
5411
+
Cys
GCA
[ENA]
¡û
>W1911749629
QWGT01000077
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
5935
5864
-
Cys
GCA
[ENA]
¡û
>W1911749669
QWGU01000090
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
2425
2354
-
Cys
GCA
[ENA]
¡û
>W1911749705
QWGV01000037
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
5401
5472
+
Cys
GCA
[ENA]
¡û
>W1911798579
QYRT01000011
Actinomycetota
Subtercola vilae DB165 [QYRT]
17667
17738
+
Cys
GCA
[ENA]
¡û
>W1911823642
QZVT01000002
Actinomycetota
Arthrobacter sp. Hz2 [QZVT]
151605
151676
+
Cys
GCA
[ENA]
¡û
>W1810072277
PEFG01000001
Actinomycetota
Micromonospora sp. CNZ299 [PEFG]
3129469
3129540
+
Cys
GCA
[ENA]
¡û
>W1810073094
PEFR01000001
Actinomycetota
Verrucosispora sp. CNZ293 [PEFR]
3059051
3058980
-
Cys
GCA
[ENA]
¡û
>W1810277224
PSTR01000001
Actinomycetota
Clavibacter michiganensis AY1B2 [PSTR]
275376
275303
-
Cys
GCA
[ENA]
¡û
>W1810277284
PSTS01000008
Actinomycetota
Clavibacter michiganensis AY1A6 [PSTS]
71090
71019
-
Cys
GCA
[ENA]
¡û
>W1810277317
PSTT01000040
Actinomycetota
Subtercola sp. Z020 [PSTT]
9873
9944
+
Cys
GCA
[ENA]
¡û
>W1810277423
PSTV01000018
Actinomycetota
Clavibacter michiganensis Z002 [PSTV]
30986
30913
-
Cys
GCA
[ENA]
¡û
>W1810277473
PSTW01000021
Actinomycetota
Clavibacter michiganensis Z001 [PSTW]
273507
273434
-
Cys
GCA
[ENA]
¡û
>W1810282074
PSXY01000006
Actinomycetota
Clavibacter michiganensis AY1B3 [PSXY]
71191
71120
-
Cys
GCA
[ENA]
¡û
>W1810356894
PVNG01000024
Actinomycetota
Nonomuraea fuscirosea CGMCC 4.7104 [PVNG]
13634
13705
+
Cys
GCA
[ENA]
¡û
>W1810392429
PYAH01000009
Actinomycetota
Micromonospora saelicesensis GAR06 [PYAH]
147868
147797
-
Cys
GCA
[ENA]
¡û
>W1810392543
PYAJ01000010
Actinomycetota
Micromonospora saelicesensis Lupac 06 [PYAJ]
553113
553042
-
Cys
GCA
[ENA]
¡û
>W1810476308
QANL01000004
Actinomycetota
Planctomonas deserti 13S1-3 [QANL]
276451
276380
-
Cys
GCA
[ENA]
¡û
>W1810681205
QKSR01000003
Actinomycetota
Curtobacterium sp. MCSS17_015 [QKSR]
25487
25414
-
Cys
GCA
[ENA]
¡û
>W1810681291
QKST01000003
Actinomycetota
Curtobacterium sp. MCLR17_007 [QKST]
6696
6769
+
Cys
GCA
[ENA]
¡û
>W1810681402
QKSV01000012
Actinomycetota
Curtobacterium sp. MCLR17_058 [QKSV]
42936
42863
-
Cys
GCA
[ENA]
¡û
>W1810681451
QKSW01000014
Actinomycetota
Curtobacterium sp. MCLR17_057 [QKSW]
41904
41831
-
Cys
GCA
[ENA]
¡û
>W1810681478
QKSX01000006
Actinomycetota
Curtobacterium sp. MCLR17_055 [QKSX]
113185
113112
-
Cys
GCA
[ENA]
¡û
>W1810681521
QKSY01000005
Actinomycetota
Curtobacterium sp. MCLR17_054 [QKSY]
75207
75280
+
Cys
GCA
[ENA]
¡û
>W1810681748
QKTD01000001
Actinomycetota
Curtobacterium sp. MCLR17_042 [QKTD]
329383
329310
-
Cys
GCA
[ENA]
¡û
>W1810681925
QKTG01000063
Actinomycetota
Curtobacterium sp. MCLR17_036 [QKTG]
10689
10616
-
Cys
GCA
[ENA]
¡û
>W1810682318
QKUA01000001
Actinomycetota
Micromonospora phaseoli DSM 45730 [QKUA]
498155
498226
+
Cys
GCA
[ENA]
¡û
>W1810860796
QTTK01000002
Actinomycetota
Clavibacter sp. 199 [QTTK]
835604
835533
-
Cys
GCA
[ENA]
¡û
>C151075664
CP011043
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-1 [CP011043]
1752759
1752686
-
Cys
GCA
[Ensembl]
¡û
>C151095723
CP012573
Actinomycetota
Clavibacter capsici PF008 [CP012573]
1883601
1883528
-
Cys
GCA
-
¡û
>W2010434182
JAAAHR010000036
Actinomycetota
Nonomuraea sp. K271 [JAAAHR]
35889
35816
-
Cys
GCA
[ENA]
¡û
>W2010498949
JAALGE010000003
Actinomycetota
Marisediminicola sp. SM7 A14 [JAALGE]
34103
34032
-
Cys
GCA
[ENA]
¡û
>W2010609808
JABMLJ010000001
Actinomycetota
Herbiconiux sp. VKM Ac-2851 [JABMLJ]
723090
723017
-
Cys
GCA
[ENA]
¡û
>W2010709694
JACHMI010000001
Actinomycetota
Nonomuraea rubra DSM 43768 [JACHMI]
3828143
3828072
-
Cys
GCA
[ENA]
¡û
>W2010709697
JACHMI010000001
Actinomycetota
Nonomuraea rubra DSM 43768 [JACHMI]
3759309
3759236
-
Cys
GCA
[ENA]
¡û
>W2010929797
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2953205
2953278
+
Cys
GCA
[ENA]
¡û
>W2010929833
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
2631070
2631143
+
Cys
GCA
[ENA]
¡û
>W2010929867
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
1606682
1606753
+
Cys
GCA
[ENA]
¡û
>W2010929915
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
2303877
2303950
+
Cys
GCA
[ENA]
¡û
>W2010929960
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
2381724
2381795
+
Cys
GCA
[ENA]
¡û
>W2010936339
NBXB01000027
Actinomycetota
Subtercola boreus P27479 [NBXB]
197478
197407
-
Cys
GCA
[ENA]
¡û
>W2010936421
NBXD01000014
Actinomycetota
Subtercola boreus P27979 [NBXD]
441244
441173
-
Cys
GCA
[ENA]
¡û
>W2011269825
QLML01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP6885 [QLML]
181973
182046
+
Cys
GCA
[ENA]
¡û
>W2011269895
QLMM01000005
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7314 [QLMM]
209415
209342
-
Cys
GCA
[ENA]
¡û
>W2011269905
QLMN01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7315 [QLMN]
38126
38199
+
Cys
GCA
[ENA]
¡û
>W2011269979
QLMO01000006
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7316 [QLMO]
38410
38483
+
Cys
GCA
[ENA]
¡û
>W2011270002
QLMP01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7488 [QLMP]
305447
305374
-
Cys
GCA
[ENA]
¡û
>W2011270039
QLMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7568 [QLMQ]
182514
182587
+
Cys
GCA
[ENA]
¡û
>W2011270082
QLMR01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7589 [QLMR]
38137
38210
+
Cys
GCA
[ENA]
¡û
>W2011270132
QLMS01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ1811 [QLMS]
24097
24024
-
Cys
GCA
[ENA]
¡û
>W2011270204
QLMT01000099
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ5026 [QLMT]
5431
5504
+
Cys
GCA
[ENA]
¡û
>W2011270227
QLMU01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 14456 [QLMU]
313588
313515
-
Cys
GCA
[ENA]
¡û
>W2011270267
QLMV01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1465 [QLMV]
609489
609416
-
Cys
GCA
[ENA]
¡û
>W2011270315
QLMW01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1940 [QLMW]
38136
38209
+
Cys
GCA
[ENA]
¡û
>W2011270383
QLMX01000099
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 10202 [QLMX]
5871
5798
-
Cys
GCA
[ENA]
¡û
>W2011270409
QLMY01000005
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2494 [QLMY]
209174
209101
-
Cys
GCA
[ENA]
¡û
>W2011270444
QLMZ01000012
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2500 [QLMZ]
5928
5855
-
Cys
GCA
[ENA]
¡û
>W2011270482
QLNA01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP5842 [QLNA]
134877
134804
-
Cys
GCA
[ENA]
¡û
>W2011270525
QLNB01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7158 [QLNB]
187456
187529
+
Cys
GCA
[ENA]
¡û
>W2011270571
QLNC01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7311 [QLNC]
38140
38213
+
Cys
GCA
[ENA]
¡û
>W2011270612
QLND01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7312 [QLND]
38138
38211
+
Cys
GCA
[ENA]
¡û
>W2011270686
QLNE01000101
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ARZ28 [QLNE]
5367
5440
+
Cys
GCA
[ENA]
¡û
>W2011279206
QODA01000008
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ2541 [QODA]
37992
38065
+
Cys
GCA
[ENA]
¡û
>W2011316472
QWDZ01000002
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
5881
5810
-
Cys
GCA
[ENA]
¡û
>W2011316533
QWEA01000224
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
638
709
+
Cys
GCA
[ENA]
¡û
>W2011316574
QWEB01000050
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
5370
5441
+
Cys
GCA
[ENA]
¡û
>W2011316628
QWEC01000072
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
5955
5882
-
Cys
GCA
[ENA]
¡û
>W2011316654
QWED01000021
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
5390
5461
+
Cys
GCA
[ENA]
¡û
>W2011316711
QWEE01000063
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
5896
5823
-
Cys
GCA
[ENA]
¡û
>W2011318820
QWGS01000036
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
5340
5411
+
Cys
GCA
[ENA]
¡û
>W2011318874
QWGT01000077
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
5935
5864
-
Cys
GCA
[ENA]
¡û
>W2011318914
QWGU01000090
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
2425
2354
-
Cys
GCA
[ENA]
¡û
>W2011318950
QWGV01000037
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
5401
5472
+
Cys
GCA
[ENA]
¡û
>W2011343547
QYRT01000011
Actinomycetota
Subtercola vilae DB165 [QYRT]
17667
17738
+
Cys
GCA
[ENA]
¡û
>W2011410816
RDQV01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus CFBP 2404 [RDQV]
342071
342000
-
Cys
GCA
[ENA]
¡û
>W2011410890
RDQW01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP 4999 [RDQW]
209236
209163
-
Cys
GCA
[ENA]
¡û
>W2011441966
RJUO01000001
Actinomycetota
Frondihabitans sp. PhB188 [RJUO]
476021
476094
+
Cys
GCA
[ENA]
¡û
>W2011538896
SCNI01000002
Actinomycetota
Microbacteriaceae bacterium 3FA27C10 [SCNI]
150627
150554
-
Cys
GCA
[ENA]
¡û
>W2011635367
SMJZ01000088
Actinomycetota
Nonomuraea sp. KC201 [SMJZ]
32624
32551
-
Cys
GCA
[ENA]
¡û
>W2011636296
SMKQ01000049
Actinomycetota
Nonomuraea sp. CH32 [SMKQ]
4045
4118
+
Cys
GCA
[ENA]
¡û
>W2011636315
SMKQ01000261
Actinomycetota
Nonomuraea sp. CH32 [SMKQ]
6745
6817
+
Cys
GCA
[ENA]
¡û
>W2011973907
VCJS01000053
Actinomycetota
Nonomuraea sp. 160415 [VCJS]
62394
62323
-
Cys
GCA
[ENA]
¡û
>W2011973919
VCJS01000111
Actinomycetota
Nonomuraea sp. 160415 [VCJS]
10718
10647
-
Cys
GCA
[ENA]
¡û
>W2011976007
VCKY01000268
Actinomycetota
Nonomuraea turkmeniaca DSM 43926 [VCKY]
12487
12558
+
Cys
GCA
[ENA]
¡û
>W2011976013
VCKY01000355
Actinomycetota
Nonomuraea turkmeniaca DSM 43926 [VCKY]
2939
3010
+
Cys
GCA
[ENA]
¡û
>W2012017647
VFMP01000001
Actinomycetota
Micromonospora sp. A202 [VFMP]
1498855
1498926
+
Cys
GCA
[ENA]
¡û
>W2012125073
VRMG01000004
Actinomycetota
Glaciihabitans sp. CHu50b-6-2 [VRMG]
346137
346066
-
Cys
GCA
[ENA]
¡û
>W2012433321
WTCS01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis OP3 [WTCS]
1947334
1947261
-
Cys
GCA
[ENA]
¡û
>W2110036180
BMQB01000001
Actinomycetota
Pilimelia anulata JCM 3090 [BMQB]
581457
581528
+
Cys
GCA
[ENA]
¡û
>W2110159706
JAATPM010000099
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 1217 [JAATPM]
5768
5695
-
Cys
GCA
[ENA]
¡û
>W2110201576
JACDTW010000001
Actinomycetota
Subtercola lobariae 9583b [JACDTW]
1385969
1386040
+
Cys
GCA
[ENA]
¡û
>W2110301326
JADBEK010000001
Actinomycetota
Nonomuraea angiospora DSM 43173 [JADBEK]
3625425
3625354
-
Cys
GCA
[ENA]
¡û
>W2110328861
JADKRO010000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VKM Ac-1790 [JADKRO]
844110
844037
-
Cys
GCA
[ENA]
¡û
>W2110328926
JADKRP010000002
Actinomycetota
Clavibacter michiganensis subsp. phaseoli VKM Ac-2886 [JADKRP]
175227
175156
-
Cys
GCA
[ENA]
¡û
>W2110328936
JADKRQ010000001
Actinomycetota
Clavibacter sp. VKM Ac-2542 [JADKRQ]
175004
175077
+
Cys
GCA
[ENA]
¡û
>W2110328997
JADKRR010000001
Actinomycetota
Clavibacter sp. VKM Ac-2872 [JADKRR]
1980478
1980405
-
Cys
GCA
[ENA]
¡û
>W2110329023
JADKRS010000001
Actinomycetota
Clavibacter sp. VKM Ac-2873 [JADKRS]
28070
28141
+
Cys
GCA
[ENA]
¡û
>W2110363676
JADOVH010000003
Actinomycetota
Frigoribacterium sp. CG_9.8 [JADOVH]
102613
102684
+
Cys
GCA
[ENA]
¡û
>W2110457632
JAFBBI010000001
Actinomycetota
Clavibacter michiganensis PvP097 [JAFBBI]
1217583
1217654
+
Cys
GCA
[ENA]
¡û
>W2110457703
JAFBBJ010000001
Actinomycetota
Clavibacter michiganensis PvP098 [JAFBBJ]
919315
919244
-
Cys
GCA
[ENA]
¡û
>W2110554424
JAGIOV010000001
Actinomycetota
Clavibacter michiganensis PvP036 [JAGIOV]
2354065
2353994
-
Cys
GCA
[ENA]
¡û
>W2110564171
JAGPXS010000017
Actinomycetota
Micromonospora sp. C81 [JAGPXS]
72071
72142
+
Cys
GCA
[ENA]
¡û
>W2110564604
JAGPYA010000031
Actinomycetota
Micromonospora sp. M61 [JAGPYA]
39432
39503
+
Cys
GCA
[ENA]
¡û
>W2110599802
JAHEWV010000014
Actinomycetota
Clavibacter michiganensis CFBP 3399 [JAHEWV]
46819
46890
+
Cys
GCA
[ENA]
¡û
>C201055751
CP033723
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 61-1 [CP033723]
1890729
1890658
-
Cys
GCA
-
¡û
>C201261350
CP053344
Actinomycetota
Herbiconiux sp. SALV-R1 [CP053344]
1722597
1722524
-
Cys
GCA
-
¡û
>C211060595
CP043653
Actinomycetota
Glaciihabitans sp. INWT7 [CP043653]
1726281
1726210
-
Cys
GCA
-
¡û
>C211144364
CP061274
Actinomycetota
Clavibacter sp. DM1 [CP061274]
1930729
1930658
-
Cys
GCA
-
¡û
>C211344387
CP076349
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ28 [CP076349]
1962851
1962778
-
Cys
GCA
-
¡û
>C211344431
CP076352
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ143 [CP076352]
1947339
1947266
-
Cys
GCA
-
¡û
>C231046714
CP040786
Actinomycetota
Clavibacter phaseoli LPPA 982 [CP040786]
868349
868420
+
Cys
GCA
-
¡û
>C231046789
CP040788
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [CP040788]
1180465
1180394
-
Cys
GCA
-
¡û
>C231046825
CP040792
Actinomycetota
Clavibacter californiensis CFBP 8216 [CP040792]
2394876
2394803
-
Cys
GCA
-
¡û
>C231046847
CP040795
Actinomycetota
Clavibacter phaseoli CFBP 8217 [CP040795]
992333
992404
+
Cys
GCA
-
¡û
>C231046885
CP040797
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis A6096 [CP040797]
144043
144114
+
Cys
GCA
-
¡û
>C231064285
CP053437
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A5747* [CP053437]
1658714
1658787
+
Cys
GCA
-
¡û
>C231065126
CP053860
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A4758 [CP053860]
2449304
2449377
+
Cys
GCA
-
¡û
>C231166313
CP080437
Actinomycetota
Clavibacter michiganensis LMG7333 [CP080437]
1058185
1058112
-
Cys
GCA
-
¡û
>C231180671
CP083439
Actinomycetota
Clavibacter sp. A6099 [CP083439]
2004977
2004904
-
Cys
GCA
-
¡û
>C231203735
CP085106
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM84 [CP085106]
2034622
2034549
-
Cys
GCA
-
¡û
>C231203979
CP085137
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM09 [CP085137]
2034612
2034539
-
Cys
GCA
-
¡û
>C231204023
CP085140
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM39 [CP085140]
2034618
2034545
-
Cys
GCA
-
¡û
>C231226856
CP086345
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CNK-2 [CP086345]
1890727
1890656
-
Cys
GCA
-
¡û
>C231226900
CP086346
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 44 [CP086346]
1908728
1908657
-
Cys
GCA
-
¡û
>C231226944
CP086348
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis SL1 [CP086348]
1890951
1890880
-
Cys
GCA
-
¡û
>C231226988
CP086349
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CIBA [CP086349]
1890774
1890703
-
Cys
GCA
-
¡û
>C231227032
CP086350
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 419B [CP086350]
1909108
1909037
-
Cys
GCA
-
¡û
>C231252409
CP088266
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus K496 [CP088266]
2475125
2475052
-
Cys
GCA
-
¡û
>C231359432
CP095274
Actinomycetota
Clavibacter michiganensis subsp. michiganensis N.P. [CP095274]
2075428
2075355
-
Cys
GCA
-
¡û
>W2110768335
SISU01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 0317 [SISU]
615547
615474
-
Cys
GCA
[ENA]
¡û
>C231588149
CP116936
Actinomycetota
Micromonospora sp. LH3U1 [CP116936]
1825981
1826052
+
Cys
GCA
-
¡û
>C231601456
CP117773
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM04 [CP117773]
2034612
2034539
-
Cys
GCA
-
¡û
>C231601500
CP117776
Actinomycetota
Clavibacter michiganensis subsp. michiganensis Cmm_21 [CP117776]
2034630
2034557
-
Cys
GCA
-
¡û
>C241040277
CP033721
Actinomycetota
Clavibacter nebraskensis HF4 [CP033721]
1890913
1890842
-
Cys
GCA
-
¡û
>C241040321
CP033722
Actinomycetota
Clavibacter nebraskensis 7580 [CP033722]
1890722
1890651
-
Cys
GCA
-
¡û
>C241040365
CP033724
Actinomycetota
Clavibacter michiganensis subsp. michiganensis UF1 [CP033724]
2034630
2034557
-
Cys
GCA
-
¡û
>C241098395
CP045572
Actinomycetota
Nonomuraea phyllanthi WYY166 [CP045572]
7343880
7343951
+
Cys
GCA
-
¡û
>C241115395
CP047051
Actinomycetota
Clavibacter michiganensis subsp. michiganensis MSF322 [CP047051]
2053229
2053156
-
Cys
GCA
-
¡û
>C241115440
CP047054
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VL527 [CP047054]
2081649
2081576
-
Cys
GCA
-
¡û
>C241127501
CP048045
Actinomycetota
Clavibacter capsici 1207 [CP048045]
1942512
1942441
-
Cys
GCA
-
¡û
>C241127546
CP048047
Actinomycetota
Clavibacter capsici 1106 [CP048047]
1880437
1880366
-
Cys
GCA
-
¡û
>C241127590
CP048049
Actinomycetota
Clavibacter capsici 1101 [CP048049]
1883640
1883569
-
Cys
GCA
-
¡û
>W2130022644
JADOGI010000117
Actinomycetota
Nonomuraea cypriaca K274 [JADOGI]
10318
10389
+
Cys
GCA
[ENA]
¡û
>W2130022653
JADOGI010000151
Actinomycetota
Nonomuraea cypriaca K274 [JADOGI]
23593
23520
-
Cys
GCA
[ENA]
¡û
>C241201051
CP107853
Actinomycetota
Nonomuraea sp. NBC_00507 [CP107853]
6577407
6577336
-
Cys
GCA
-
¡û
>C241201054
CP107853
Actinomycetota
Nonomuraea sp. NBC_00507 [CP107853]
6509325
6509254
-
Cys
GCA
-
¡û
>C241202148
CP107892
Actinomycetota
Micromonospora zamorensis NBC_00469 [CP107892]
3105916
3105987
+
Cys
GCA
-
¡û
>C241203883
CP107936
Actinomycetota
Micromonospora zamorensis NBC_00407 [CP107936]
4125839
4125768
-
Cys
GCA
-
¡û
>C241204115
CP107941
Actinomycetota
Micromonospora zamorensis NBC_00396 [CP107941]
4237800
4237729
-
Cys
GCA
-
¡û
>C241205396
CP107974
Actinomycetota
Micromonospora zamorensis NBC_00361 [CP107974]
3993118
3993047
-
Cys
GCA
-
¡û
>C241206806
CP108022
Actinomycetota
Micromonospora zamorensis NBC_00317 [CP108022]
1965249
1965320
+
Cys
GCA
-
¡û
>W2130033714
JAGPYL010000196
Actinomycetota
Micromonospora sp. U56 [JAGPYL]
6455
6526
+
Cys
GCA
[ENA]
¡û
>W2130036475
JAHKRL010000356
Actinomycetota
Nonomuraea rhizosphaerae CGMCC 4.7431 [JAHKRL]
5334
5407
+
Cys
GCA
[ENA]
¡û
>W2310022392
BSEW01000002
Actinomycetota
Herbiconiux flava VKM Ac-2058 [BSEW]
961644
961717
+
Cys
GCA
[ENA]
¡û
>W1511352439
JROD01000005
Actinomycetota
Clavibacter michiganensis CF11 [JROD]
130870
130797
-
Cys
GCA
[ENA]
¡û
>W1511524502
JYFC01000001
Actinomycetota
Agreia bicolorata VKM Ac-1804 [JYFC]
66751
66678
-
Cys
GCA
[ENA]
¡û
>W1511570098
LAKL01000017
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis DOAB 397 [LAKL]
83024
82951
-
Cys
GCA
[ENA]
¡û
>C131019554
HE614873
Actinomycetota
Clavibacter nebraskensis NCPPB 2581 type strain: NCPPB 2581 [HE614873]
1890367
1890294
-
Cys
GCA
[Ensembl]
¡û
>W1610867030
LQXA01000023
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
37047
37120
+
Cys
GCA
[ENA]
¡û
>W1610918515
LSOE01000006
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
318563
318490
-
Cys
GCA
[ENA]
¡û
>W1710553800
FOHX01000005
Actinomycetota
Nonomuraea wenchangensis [FOHX]
563099
563028
-
Cys
GCA
[ENA]
¡û
>W1710553803
FOHX01000005
Actinomycetota
Nonomuraea wenchangensis [FOHX]
514253
514182
-
Cys
GCA
[ENA]
¡û
>W1710604657
FVZG01000001
Actinomycetota
Clavibacter michiganensis [FVZG]
1835163
1835090
-
Cys
GCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
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Direction
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Download Sequence
Representative sequence of each cluster
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