tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.448505 (135 seq.)
>W1710821514 LKTL01000050 Gammaproteobacteria Shewanella sp. P1-14-1 [LKTL] 353 280 - Gly TCC [ENA] ¡û
>W1711027104 LRDC01000030 Gammaproteobacteria Shewanella frigidimarina [LRDC] 42303 42230 - Gly TCC [ENA] ¡û
>W1711273454 LZFV01000011 Gammaproteobacteria Shewanella sp. UCD-FRSSP16_17 [LZFV] 562 489 - Gly TCC [ENA] ¡û
>W1711340572 MCBT01000019 Gammaproteobacteria Shewanella colwelliana [MCBT] 1456 1383 - Gly TCC [ENA] ¡û
>W1711624522 MPHJ01000032 Gammaproteobacteria Shewanella sp. UCD-KL12 [MPHJ] 850 777 - Gly TCC [ENA] ¡û
>W1711624633 MPHK01000041 Gammaproteobacteria Shewanella sp. UCD-KL21 [MPHK] 654 581 - Gly TCC [ENA] ¡û
>C171033335 CP014782 Gammaproteobacteria Shewanella psychrophila WP2 [CP014782] 384527 384600 + Gly TCC - ¡û
>C171108595 CP020472 Gammaproteobacteria Shewanella japonica KCTC 22435 [CP020472] 4765482 4765409 - Gly TCC - ¡û
>C021936 CP000447 Gammaproteobacteria Shewanella frigidimarina NCIMB 400 [CP000447] 151973 152046 + Gly TCC [Ensembl] ¡û
>C022650 CP000606 Gammaproteobacteria Shewanella loihica PV-4 [CP000606] 160644 160717 + Gly TCC [Ensembl] ¡û
>w021141 AAVJ01000081 Gammaproteobacteria Shewanella pealeana ATCC 700345 [AAVJ] 260 190 - Gly TCC [ENA] ¡û
>w020046 AAUO01000078 Gammaproteobacteria Shewanella woodyi ATCC 51908 [AAUO] 2838 2768 - Gly TCC [ENA] ¡û
>W08005725 ABIC01000092 Gammaproteobacteria Shewanella benthica KT99 [ABIC] 135 208 + Gly TCC [ENA] ¡û
>C08010571 CP000821 Gammaproteobacteria Shewanella sediminis HAW-EB3 [CP000821] 5303411 5303341 - Gly TCC [Ensembl] ¡û
>C08010117 CP000851 Gammaproteobacteria Shewanella pealeana ATCC 700345 [CP000851] 191818 191891 + Gly TCC [Ensembl] ¡û
>WENV182560301 OJDT01032629 [OJDT] seawater metagenome; Sea water 117 190 + Gly TCC [ENA] ¡û
>WENV182577415 OJGE01002682 [OJGE] seawater metagenome; Sea water 1101 1028 - Gly TCC [ENA] ¡û
>C08009867 CP000931 Gammaproteobacteria Shewanella halifaxensis HAW-EB4 [CP000931] 5043684 5043614 - Gly TCC [Ensembl] ¡û
>W141276851 JAEC01000049 Gammaproteobacteria Shewanella colwelliana ATCC 39565 [JAEC] 192 119 - Gly TCC [ENA] ¡û
>W141277092 JAEH01000082 Gammaproteobacteria Shewanella waksmanii ATCC BAA-643 [JAEH] 1050 977 - Gly TCC [ENA] ¡û
>C08010763 CP000961 Gammaproteobacteria Shewanella woodyi ATCC 51908 [CP000961] 5675102 5675032 - Gly TCC [Ensembl] ¡û
>WENV183053741 OLGQ01001919 [OLGQ] seawater metagenome; Sea water 63 136 + Gly TCC [ENA] ¡û
>WENV183058295 OLHP01002628 [OLHP] seawater metagenome; Sea water 1503 1430 - Gly TCC [ENA] ¡û
>WENV183058413 OLHQ01012829 [OLHQ] seawater metagenome; Sea water 118 191 + Gly TCC [ENA] ¡û
>WENV170022246 BCQK01002751 [BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama 441 368 - Gly TCC [ENA] ¡û
>WENV170023706 BCQL01001445 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 3724 3797 + Gly TCC [ENA] ¡û
>C181061280 CP022272 Gammaproteobacteria Shewanella marisflavi EP1 [CP022272] 149355 149428 + Gly TCC - ¡û
>C181214256 LS483452 Gammaproteobacteria Shewanella benthica DB21MT-2 [LS483452] 305567 305494 - Gly TCC - ¡û
>C191117173 CP034015 Gammaproteobacteria Shewanella livingstonensis LMG 19866 [CP034015] 404176 404249 + Gly TCC - ¡û
>C191148696 CP036200 Gammaproteobacteria Shewanella maritima D4-2 [CP036200] 2595700 2595773 + Gly TCC - ¡û
>C191173190 CP039928 Gammaproteobacteria Shewanella sp. MEBiC00475 [CP039928] 2384140 2384213 + Gly TCC - ¡û
>C191185868 CP041036 Gammaproteobacteria Shewanella polaris SM1901 [CP041036] 4458086 4458013 - Gly TCC - ¡û
>C191187165 CP041153 Gammaproteobacteria Shewanella marisflavi ECSMB14101 [CP041153] 150278 150351 + Gly TCC - ¡û
>W09104518 AALS01000076 Gammaproteobacteria Shewanella loihica PV-4 [AALS] 1029 956 - Gly TCC [ENA] ¡û
>C09109813 CP000472 Gammaproteobacteria Shewanella piezotolerans WP3 [CP000472] 2072701 2072774 + Gly TCC [Ensembl] ¡û
>W1910676741 MCTV01000034 Gammaproteobacteria Shewanella sp. 10N.286.52.C2 [MCTV] 17245 17172 - Gly TCC [ENA] ¡û
>W1910676913 MCTY01000039 Gammaproteobacteria Shewanella sp. 10N.286.52.B9 [MCTY] 376 303 - Gly TCC [ENA] ¡û
>W1910677485 MCUF01000042 Gammaproteobacteria Shewanella sp. 10N.286.51.B7 [MCUF] 454 381 - Gly TCC [ENA] ¡û
>W1910679475 MCVG01000032 Gammaproteobacteria Shewanella sp. 10N.286.48.B5 [MCVG] 4647 4720 + Gly TCC [ENA] ¡û
>W1910679678 MCVI01000031 Gammaproteobacteria Shewanella sp. 10N.286.48.A6 [MCVI] 376 303 - Gly TCC [ENA] ¡û
>W1911551635 OXJV01000004 Gammaproteobacteria Shewanella algidipiscicola [OXJV] 26237 26164 - Gly TCC [ENA] ¡û
>W1911710066 QPQT01000014 Gammaproteobacteria Shewanella algidipiscicola LMG 23746 [QPQT] 118826 118753 - Gly TCC [ENA] ¡û
>W1911710167 QPQU01000027 Gammaproteobacteria Shewanella pacifica KCTC 12235 [QPQU] 4089 4162 + Gly TCC [ENA] ¡û
>W1810005535 BFBQ01000001 Gammaproteobacteria Shewanella halifaxensis 6JANF4-E-4 [BFBQ] 1950764 1950837 + Gly TCC [ENA] ¡û
>W1810155874 PJAZ01000001 Gammaproteobacteria Shewanella sp. Bg11-22 [PJAZ] 4109 4182 + Gly TCC [ENA] ¡û
>W1810156210 PJBE01000010 Gammaproteobacteria Shewanella sp. Choline-02u-19 [PJBE] 32379 32306 - Gly TCC [ENA] ¡û
>W1810156722 PJBL01000031 Gammaproteobacteria Shewanella sp. GutCb [PJBL] 32372 32299 - Gly TCC [ENA] ¡û
>W1810156755 PJBM01000118 Gammaproteobacteria Shewanella sp. GutDb-MelDb [PJBM] 15562 15489 - Gly TCC [ENA] ¡û
>W1810157731 PJCD01000001 Gammaproteobacteria Shewanella sp. ALD9 [PJCD] 4146 4219 + Gly TCC [ENA] ¡û
>W1810157852 PJCE01000001 Gammaproteobacteria Shewanella sp. Actino-trap-3 [PJCE] 3437727 3437800 + Gly TCC [ENA] ¡û
>W2010473942 JAAIKQ010000008 Gammaproteobacteria Shewanella sp. WXL01 [JAAIKQ] 54370 54297 - Gly TCC [ENA] ¡û
>W2010612030 JABRVS010000001 Gammaproteobacteria Shewanella sp. VB17 [JABRVS] 500444 500517 + Gly TCC [ENA] ¡û
>W2010734463 JACJDU010000093 Gammaproteobacteria Shewanella sp. SR44-4 [JACJDU] 451 378 - Gly TCC [ENA] ¡û
>W2010734744 JACJDX010000028 Gammaproteobacteria Shewanella sp. SR43-8 [JACJDX] 432 359 - Gly TCC [ENA] ¡û
>W2010735130 JACJEB010000035 Gammaproteobacteria Shewanella sp. SR43-4 [JACJEB] 4356 4429 + Gly TCC [ENA] ¡û
>W2010736619 JACJER010000272 Gammaproteobacteria Shewanella sp. SG44-6 [JACJER] 1110 1183 + Gly TCC [ENA] ¡û
>W2010736908 JACJEU010000056 Gammaproteobacteria Shewanella sp. SG44-2 [JACJEU] 452 379 - Gly TCC [ENA] ¡û
>W2010738376 JACJFJ010000020 Gammaproteobacteria Shewanella sp. SG41-3 [JACJFJ] 4246 4319 + Gly TCC [ENA] ¡û
>W2010790056 LVDJ01000033 Gammaproteobacteria Shewanella sp. KCT [LVDJ] 711 638 - Gly TCC [ENA] ¡û
>W2010810471 MCTV01000034 Gammaproteobacteria Shewanella sp. 10N.286.52.C2 [MCTV] 17245 17172 - Gly TCC [ENA] ¡û
>W2010810644 MCTY01000039 Gammaproteobacteria Shewanella sp. 10N.286.52.B9 [MCTY] 376 303 - Gly TCC [ENA] ¡û
>W2010811218 MCUF01000042 Gammaproteobacteria Shewanella sp. 10N.286.51.B7 [MCUF] 454 381 - Gly TCC [ENA] ¡û
>W2010813210 MCVG01000032 Gammaproteobacteria Shewanella sp. 10N.286.48.B5 [MCVG] 4647 4720 + Gly TCC [ENA] ¡û
>W2010813413 MCVI01000031 Gammaproteobacteria Shewanella sp. 10N.286.48.A6 [MCVI] 376 303 - Gly TCC [ENA] ¡û
>W2011175897 OXJV01000004 Gammaproteobacteria Shewanella algidipiscicola [OXJV] 26237 26164 - Gly TCC [ENA] ¡û
>W2011284544 QPQT01000014 Gammaproteobacteria Shewanella algidipiscicola LMG 23746 [QPQT] 118826 118753 - Gly TCC [ENA] ¡û
>W2011284645 QPQU01000027 Gammaproteobacteria Shewanella pacifica KCTC 12235 [QPQU] 4089 4162 + Gly TCC [ENA] ¡û
>W2011451115 RKKB01000020 Gammaproteobacteria Shewanella sp. R106 [RKKB] 3753 3826 + Gly TCC [ENA] ¡û
>W2011451202 RKKC01000027 Gammaproteobacteria Shewanella frigidimarina KCCM 41815 [RKKC] 42376 42303 - Gly TCC [ENA] ¡û
>W2011451278 RKKD01000013 Gammaproteobacteria Shewanella vesiculosa LMG 24424 [RKKD] 42441 42368 - Gly TCC [ENA] ¡û
>W2011451382 RKKE01000013 Gammaproteobacteria Shewanella arctica Kim et al. 2012 KCTC 23109 [RKKE] 3853 3926 + Gly TCC [ENA] ¡û
>W2011461174 RPGD01000160 Gammaproteobacteria Candidatus Enterovibrio escacola [RPGD] 521 448 - Gly TCC [ENA] ¡û
>W2011498195 RXNU01000021 Gammaproteobacteria Shewanella canadensis HAW-EB2 [RXNU] 42986 42913 - Gly TCC [ENA] ¡û
>W2011498313 RXNV01000032 Gammaproteobacteria Shewanella atlantica HAW-EB5 [RXNV] 437 364 - Gly TCC [ENA] ¡û
>W2012063151 VJOS01000013 Gammaproteobacteria Shewanella sp. YLB-08 [VJOS] 582856 582929 + Gly TCC [ENA] ¡û
>W2012070310 VKGK01000040 Gammaproteobacteria Shewanella hanedai JCM 20706 [VKGK] 42867 42794 - Gly TCC [ENA] ¡û
>W2012070557 VKHR01000100 Gammaproteobacteria Shewanella sp. TC10 [VKHR] 4184 4257 + Gly TCC [ENA] ¡û
>W2012106532 VOQB01000026 Gammaproteobacteria Shewanella sp. YLB-07 [VOQB] 4212 4285 + Gly TCC [ENA] ¡û
>W2012350793 WJHV01000012 Gammaproteobacteria Shewanella sp. XMDDZSB0408 [WJHV] 390 317 - Gly TCC [ENA] ¡û
>W2012425844 WRPA01000028 Gammaproteobacteria Shewanella insulae JBTF-M18 [WRPA] 42468 42395 - Gly TCC [ENA] ¡û
>W2012430724 WSRZ01000031 Gammaproteobacteria Shewanella litoralis JCM 32306 [WSRZ] 42330 42257 - Gly TCC [ENA] ¡û
>W2110026441 BMII01000037 Gammaproteobacteria Shewanella inventionis CGMCC 1.15339 [BMII] 42075 42002 - Gly TCC [ENA] ¡û
>W2110034504 BMOT01000021 Gammaproteobacteria Shewanella aestuarii JCM 17801 [BMOT] 3951 4024 + Gly TCC [ENA] ¡û
>W2110035303 BMPL01000073 Gammaproteobacteria Shewanella hanedai JCM 20706 [BMPL] 694 621 - Gly TCC [ENA] ¡û
>W2110036105 BMPZ01000016 Gammaproteobacteria Shewanella gelidii JCM 30804 [BMPZ] 25638 25565 - Gly TCC [ENA] ¡û
>W2110036649 BMQI01000106 Gammaproteobacteria Shewanella algicola JCM 31091 [BMQI] 4203 4276 + Gly TCC [ENA] ¡û
>W2110037324 BMQV01000058 Gammaproteobacteria Shewanella saliphila JCM 32304 [BMQV] 15892 15819 - Gly TCC [ENA] ¡û
>W2110037411 BMQW01000023 Gammaproteobacteria Shewanella ulleungensis JCM 32305 [BMQW] 4106 4179 + Gly TCC [ENA] ¡û
>W2110037495 BMQX01000060 Gammaproteobacteria Shewanella litoralis JCM 32306 [BMQX] 4227 4300 + Gly TCC [ENA] ¡û
>W2110069014 BPET01000050 Gammaproteobacteria Shewanella sp. MBTL60-007 [BPET] 3764 3837 + Gly TCC [ENA] ¡û
>W2110069122 BPEU01000037 Gammaproteobacteria Shewanella colwelliana MBTL60-118 [BPEU] 42559 42486 - Gly TCC [ENA] ¡û
>W2110069207 BPEV01000043 Gammaproteobacteria Shewanella sp. KT0246 [BPEV] 3724 3797 + Gly TCC [ENA] ¡û
>W2110069299 BPEW01000041 Gammaproteobacteria Shewanella sp. c952 [BPEW] 4803 4876 + Gly TCC [ENA] ¡û
>W2110069405 BPEX01000034 Gammaproteobacteria Shewanella schlegeliana JCM 11561 [BPEX] 4315 4388 + Gly TCC [ENA] ¡û
>W2110069470 BPEY01000038 Gammaproteobacteria Shewanella sairae JCM 11563 [BPEY] 43860 43787 - Gly TCC [ENA] ¡û
>W2110069645 BPEZ01000035 Gammaproteobacteria Shewanella sp. MBTL60-112-B1 [BPEZ] 44132 44059 - Gly TCC [ENA] ¡û
>W2110069756 BPFA01000038 Gammaproteobacteria Shewanella sp. MBTL60-112-B2 [BPFA] 43723 43650 - Gly TCC [ENA] ¡û
>W2110069865 BPFB01000091 Gammaproteobacteria Shewanella algidipiscicola LMG 23746 [BPFB] 3843 3916 + Gly TCC [ENA] ¡û
>W2110070139 BPFF01000030 Gammaproteobacteria Shewanella colwelliana ATCC BAA-642 [BPFF] 4683 4756 + Gly TCC [ENA] ¡û
>W2110143205 JAAIKR010000011 Gammaproteobacteria Shewanella intestini MCCC 1A01895 [JAAIKR] 93688 93761 + Gly TCC [ENA] ¡û
>W2110180822 JABKAW020000011 Gammaproteobacteria Shewanella sp. BF02_Schw [JABKAW] 3703 3776 + Gly TCC [ENA] ¡û
>W2110305594 JADDKM010000026 Gammaproteobacteria Shewanella benthica DSM 8812 [JADDKM] 47590 47517 - Gly TCC [ENA] ¡û
>W2110453559 JAESVD010000020 Gammaproteobacteria Shewanella schlegeliana JCM 11561 [JAESVD] 542 469 - Gly TCC [ENA] ¡û
>W2110556859 JAGJDZ010000019 Gammaproteobacteria Shewanella sp. MMG014 [JAGJDZ] 32349 32276 - Gly TCC [ENA] ¡û
>W2110667425 JAHZST010000027 Gammaproteobacteria Shewanella sp. NR704-98 [JAHZST] 4203 4276 + Gly TCC [ENA] ¡û
>C201098514 CP041614 Gammaproteobacteria Shewanella sp. YLB-06 [CP041614] 6150354 6150281 - Gly TCC - ¡û
>C201211260 CP048031 Gammaproteobacteria Shewanella sp. Arc9-LZ [CP048031] 153637 153710 + Gly TCC - ¡û
>C211063210 CP045427 Gammaproteobacteria Shewanella sp. YLB-09 [CP045427] 5983625 5983552 - Gly TCC - ¡û
>C211063999 CP045503 Gammaproteobacteria Shewanella sp. YLB-08 [CP045503] 5609414 5609341 - Gly TCC - ¡û
>C211156622 CP062058 Gammaproteobacteria Shewanella sp. WPAGA9 [CP062058] 4106454 4106381 - Gly TCC - ¡û
>C211247896 CP068437 Gammaproteobacteria Shewanella sp. KX20019 [CP068437] 5132448 5132375 - Gly TCC - ¡û
>C211378110 CP080416 Gammaproteobacteria Shewanella sp. FJAT-53532 [CP080416] 159943 160016 + Gly TCC - ¡û
>C211378205 CP080417 Gammaproteobacteria Shewanella sp. FJAT-53555 [CP080417] 159691 159764 + Gly TCC - ¡û
>C211378301 CP080418 Gammaproteobacteria Shewanella sp. FJAT-53681 [CP080418] 160541 160614 + Gly TCC - ¡û
>C211378396 CP080419 Gammaproteobacteria Shewanella sp. FJAT-53749 [CP080419] 146776 146849 + Gly TCC - ¡û
>C211378494 CP080420 Gammaproteobacteria Shewanella sp. FJAT-53764 [CP080420] 160678 160751 + Gly TCC - ¡û
>C211378589 CP080421 Gammaproteobacteria Shewanella sp. FJAT-53870 [CP080421] 139369 139442 + Gly TCC - ¡û
>C211378684 CP080422 Gammaproteobacteria Shewanella sp. FJAT-54031 [CP080422] 160785 160858 + Gly TCC - ¡û
>C211399837 CP082926 Gammaproteobacteria Shewanella inventionis D1489 [CP082926] 618674 618747 + Gly TCC - ¡û
>C231047061 CP041216 Gammaproteobacteria Shewanella glacialimarina TZS-4 [CP041216] 4301307 4301234 - Gly TCC - ¡û
>C231131343 CP073588 Gammaproteobacteria Shewanella vesiculosa M7 [CP073588] 3375135 3375062 - Gly TCC - ¡û
>C231209808 CP085636 Gammaproteobacteria Shewanella sp. MTB7 [CP085636] 6047321 6047248 - Gly TCC - ¡û
>C231287720 CP090974 Gammaproteobacteria Shewanella sp. OMA3-2 [CP090974] 302585 302512 - Gly TCC - ¡û
>C241056490 CP041329 Gammaproteobacteria Shewanella sp. Scap07 [CP041329] 254625 254698 + Gly TCC - ¡û
>C241061710 CP041783 Gammaproteobacteria Shewanella donghaensis LT17 [CP041783] 3396793 3396866 + Gly TCC - ¡û
>C241143068 CP050313 Gammaproteobacteria Shewanella aestuarii PN3F2 [CP050313] 136068 136141 + Gly TCC - ¡û
>C241274075 CP126972 Gammaproteobacteria Shewanella goraebulensis DAU312 [CP126972] 194960 195033 + Gly TCC - ¡û
>C10112864 AP011177 Gammaproteobacteria Shewanella violacea DSS12 [AP011177] 4773592 4773519 - Gly TCC [Ensembl] ¡û
>W1511302155 JPII01000032 Gammaproteobacteria Shewanella sp. cp20 [JPII] 931 858 - Gly TCC [ENA] ¡û
>W1511366828 JSFF01000048 Gammaproteobacteria Shewanella sp. ECSMB14101 [JSFF] 341 268 - Gly TCC [ENA] ¡û
>W1610460616 FKJK01000014 Gammaproteobacteria Shewanella woodyi Alg231_23 [FKJK] 5625 5698 + Gly TCC [ENA] ¡û
>W1610685476 LKTL01000050 Gammaproteobacteria Shewanella sp. P1-14-1 [LKTL] 353 280 - Gly TCC [ENA] ¡û
>W1610875216 LRDC01000030 Gammaproteobacteria Shewanella frigidimarina [LRDC] 42303 42230 - Gly TCC [ENA] ¡û
>W1611032803 LZFV01000011 Gammaproteobacteria Shewanella sp. UCD-FRSSP16_17 [LZFV] 562 489 - Gly TCC [ENA] ¡û
>W1710460180 FKJK01000014 Gammaproteobacteria Shewanella woodyi Alg231_23 [FKJK] 5625 5698 + Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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