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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.451583 (3 seq.)
>C151078203
CP011212
Unclassified
candidate division TM6 bacterium GW2011_GWF2_28_16 [CP011212]
838812
838886
+
Pro
CGG
-
¡û
>W1511599203
LBSB01000007
Unclassified
Candidatus Pacebacteria bacterium GW2011_GWF1_36_5 bacterium GW2011_GWF1_36_5 [LBSB]
18492
18418
-
Pro
CGG
[ENA]
¡û
>W1511601982
LBVQ01000001
Unclassified
Candidatus Pacebacteria bacterium GW2011_GWF2_38_9 bacterium GW2011_GWF2_38_9 [LBVQ]
833408
833482
+
Pro
CGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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