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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.452377 (6 seq.)
>C016834
AE017126
Cyanobacteriota
Prochlorococcus marinus subsp. marinus str. CCMP1375 CCMP1375; SS120 [AE017126]
1616743
1616670
-
Arg
CCT
[Ensembl]
¡û
>W1511219071
JNAT01000011
Cyanobacteriota
Prochlorococcus marinus str. LG [JNAT]
121108
121183
+
Arg
CCT
[ENA]
¡û
>W1511219250
JNAY01000010
Cyanobacteriota
Prochlorococcus marinus str. SS2 [JNAY]
36056
36131
+
Arg
CCT
[ENA]
¡û
>W1511219283
JNAZ01000005
Cyanobacteriota
Prochlorococcus marinus str. SS35 [JNAZ]
150794
150869
+
Arg
CCT
[ENA]
¡û
>W1511219474
JNBD01000011
Cyanobacteriota
Prochlorococcus marinus str. SS51 [JNBD]
232185
232110
-
Arg
CCT
[ENA]
¡û
>W1511219513
JNBE01000019
Cyanobacteriota
Prochlorococcus sp. SS52 [JNBE]
246524
246449
-
Arg
CCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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